RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 SLC36A4Q6YBV0 504 aa13.96□□□□□ -0.17
NEK9-209ENST00000556170 SLC16A12Q6ZSM3 486 aa13.96□□□□□ -0.17
NEK9-209ENST00000556170 ASB18Q6ZVZ8 466 aa13.96□□□□□ -0.17
NEK9-209ENST00000556170 SLC46A3Q7Z3Q1 461 aa13.96□□□□□ -0.17
NEK9-209ENST00000556170 OR4F15Q8NGB8 312 aa13.96□□□□□ -0.17
NEK9-209ENST00000556170 MYADMQ96S97 322 aa13.96□□□□□ -0.17
NEK9-209ENST00000556170 SLC38A3Q99624 504 aa13.96□□□□□ -0.17
NEK9-209ENST00000556170 FAM83CQ9BQN1 747 aa13.96□□□□□ -0.17
NEK9-209ENST00000556170 TPSD1Q9BZJ3 242 aa13.96□□□□□ -0.17
NEK9-209ENST00000556170 ZSCAN32Q9NX65 697 aa13.96□□□□□ -0.17
NEK9-209ENST00000556170 EXO1Q9UQ84 846 aaKnown RBP13.96□□□□□ -0.17
NEK9-209ENST00000556170 PATJQ8NI35 1801 aa13.96□□□□□ -0.18
NEK9-209ENST00000556170 PLD2O14939 933 aa13.96□□□□□ -0.18
NEK9-209ENST00000556170 HLA-DQA2P01906 255 aa13.96□□□□□ -0.18
NEK9-209ENST00000556170 MMP11P24347 488 aa13.96□□□□□ -0.18
NEK9-209ENST00000556170 AHRP35869 848 aa13.96□□□□□ -0.18
NEK9-209ENST00000556170 DBPQ10586 325 aaPredicted RBP13.96□□□□□ -0.18
NEK9-209ENST00000556170 QPRTQ15274 297 aa13.96□□□□□ -0.18
NEK9-209ENST00000556170 SHHQ15465 462 aa13.96□□□□□ -0.18
NEK9-209ENST00000556170 HLA-DQA1Q5Y7H0 255 aa13.96□□□□□ -0.18
NEK9-209ENST00000556170 LACC1Q8IV20 430 aa13.96□□□□□ -0.18
NEK9-209ENST00000556170 CPOQ8IVL8 374 aa13.96□□□□□ -0.18
NEK9-209ENST00000556170 GJD3Q8N144 294 aa13.96□□□□□ -0.18
NEK9-209ENST00000556170 ANKK1Q8NFD2 765 aa13.96□□□□□ -0.18
NEK9-209ENST00000556170 PHOSPHO2Q8TCD6 241 aa13.96□□□□□ -0.18
NEK9-209ENST00000556170 ZG16BQ96DA0 208 aa13.96□□□□□ -0.18
NEK9-209ENST00000556170 CNDP2Q96KP4 475 aaKnown RBP13.96□□□□□ -0.18
NEK9-209ENST00000556170 NKIRAS2Q9NYR9 191 aa13.96□□□□□ -0.18
NEK9-209ENST00000556170 SLC7A7Q9UM01 511 aa13.96□□□□□ -0.18
NEK9-209ENST00000556170 C2orf92A0A1B0GVN3 265 aa13.95□□□□□ -0.18
NEK9-209ENST00000556170 SH3D21A4FU49 640 aa13.95□□□□□ -0.18
NEK9-209ENST00000556170 AGAP5A6NIR3 686 aa13.95□□□□□ -0.18
NEK9-209ENST00000556170 PUM1Q14671 1186 aaKnown RBP eCLIP13.95□□□□□ -0.18
NEK9-209ENST00000556170 SPATC1Q76KD6 591 aa13.95□□□□□ -0.18
NEK9-209ENST00000556170 NLRP8Q86W28 1048 aa13.95□□□□□ -0.18
NEK9-209ENST00000556170 CCDC71Q8IV32 467 aaPredicted RBP13.95□□□□□ -0.18
NEK9-209ENST00000556170 SAMD14Q8IZD0 417 aaPredicted RBP13.95□□□□□ -0.18
NEK9-209ENST00000556170 RPLP0P6Q8NHW5 317 aa13.95□□□□□ -0.18
NEK9-209ENST00000556170 ZFP3Q96NJ6 502 aa13.95□□□□□ -0.18
NEK9-209ENST00000556170 PLA2G2FQ9BZM2 168 aa13.95□□□□□ -0.18
NEK9-209ENST00000556170 USP36Q9P275 1121 aaKnown RBP13.95□□□□□ -0.18
NEK9-209ENST00000556170 PCDHGB6Q9Y5F9 930 aa13.95□□□□□ -0.18
NEK9-209ENST00000556170 LAMA3Q16787 3333 aa13.95□□□□□ -0.18
NEK9-209ENST00000556170 DYRK3O43781 588 aa13.95□□□□□ -0.18
NEK9-209ENST00000556170 HCN1O60741 890 aa13.95□□□□□ -0.18
NEK9-209ENST00000556170 PAPLNO95428 1278 aa13.95□□□□□ -0.18
NEK9-209ENST00000556170 SOD1P00441 154 aa13.95□□□□□ -0.18
NEK9-209ENST00000556170 JUNDP17535 347 aa13.95□□□□□ -0.18
NEK9-209ENST00000556170 LSM11P83369 360 aaKnown RBP eCLIP13.95□□□□□ -0.18
NEK9-209ENST00000556170 AGBL4Q5VU57 503 aa13.95□□□□□ -0.18
NEK9-209ENST00000556170 LAIR1Q6GTX8 287 aa13.95□□□□□ -0.18
NEK9-209ENST00000556170 ETFBKMTQ8IXQ9 262 aa13.95□□□□□ -0.18
NEK9-209ENST00000556170 GNPDA2Q8TDQ7 276 aa13.95□□□□□ -0.18
NEK9-209ENST00000556170 OR1E3Q8WZA6 343 aa13.95□□□□□ -0.18
NEK9-209ENST00000556170 NELL2Q99435 816 aa13.95□□□□□ -0.18
NEK9-209ENST00000556170 CRISPLD2Q9H0B8 497 aa13.95□□□□□ -0.18
NEK9-209ENST00000556170 SMURF1Q9HCE7 757 aa13.95□□□□□ -0.18
NEK9-209ENST00000556170 ACSS1Q9NUB1 689 aaPredicted RBP13.95□□□□□ -0.18
NEK9-209ENST00000556170 HCN2Q9UL51 889 aa13.95□□□□□ -0.18
NEK9-209ENST00000556170 PCDHGA3Q9Y5H0 932 aa13.95□□□□□ -0.18
NEK9-209ENST00000556170 KCNE3Q9Y6H6 103 aa13.95□□□□□ -0.18
NEK9-209ENST00000556170 A0A0G2JPF8 293 aa13.95□□□□□ -0.18
NEK9-209ENST00000556170 HNRNPCL3B7ZW38 293 aa13.95□□□□□ -0.18
NEK9-209ENST00000556170 PRKYO43930 277 aa13.95□□□□□ -0.18
NEK9-209ENST00000556170 HNRNPCL4P0DMR1 293 aa13.95□□□□□ -0.18
NEK9-209ENST00000556170 ATF4P18848 351 aaPredicted RBP13.95□□□□□ -0.18
NEK9-209ENST00000556170 DRD3P35462 400 aa13.95□□□□□ -0.18
NEK9-209ENST00000556170 TGM4P49221 684 aa13.95□□□□□ -0.18
NEK9-209ENST00000556170 PPP2CBP62714 309 aa13.95□□□□□ -0.18
NEK9-209ENST00000556170 PPP2CAP67775 309 aa13.95□□□□□ -0.18
NEK9-209ENST00000556170 CSTF1Q05048 431 aaKnown RBP13.95□□□□□ -0.18
NEK9-209ENST00000556170 ZSWIM7Q19AV6 140 aa13.95□□□□□ -0.18
NEK9-209ENST00000556170 Q6ZSR6 202 aa13.95□□□□□ -0.18
NEK9-209ENST00000556170 KLHL36Q8N4N3 616 aa13.95□□□□□ -0.18
NEK9-209ENST00000556170 ACTRT3Q9BYD9 372 aa13.95□□□□□ -0.18
NEK9-209ENST00000556170 LIPT1Q9Y234 373 aa13.95□□□□□ -0.18
NEK9-209ENST00000556170 A0A1B0GVC2 190 aa13.94□□□□□ -0.18
NEK9-209ENST00000556170 A6NIN4 97 aa13.94□□□□□ -0.18
NEK9-209ENST00000556170 TNFP01375 233 aa13.94□□□□□ -0.18
NEK9-209ENST00000556170 ERV3-1Q14264 604 aa13.94□□□□□ -0.18
NEK9-209ENST00000556170 LRIT3Q3SXY7 679 aa13.94□□□□□ -0.18
NEK9-209ENST00000556170 FLYWCH1Q4VC44 716 aa13.94□□□□□ -0.18
NEK9-209ENST00000556170 WDR45BQ5MNZ6 344 aa13.94□□□□□ -0.18
NEK9-209ENST00000556170 ACSM5Q6NUN0 579 aa13.94□□□□□ -0.18
NEK9-209ENST00000556170 PARP16Q8N5Y8 322 aa13.94□□□□□ -0.18
NEK9-209ENST00000556170 CSNK1A1LQ8N752 337 aa13.94□□□□□ -0.18
NEK9-209ENST00000556170 CHPT1Q8WUD6 406 aa13.94□□□□□ -0.18
NEK9-209ENST00000556170 SNX33Q8WV41 574 aa13.94□□□□□ -0.18
NEK9-209ENST00000556170 MS4A6EQ96DS6 147 aa13.94□□□□□ -0.18
NEK9-209ENST00000556170 CNRIP1Q96F85 164 aaPredicted RBP13.94□□□□□ -0.18
NEK9-209ENST00000556170 GABARAPL1Q9H0R8 117 aa13.94□□□□□ -0.18
NEK9-209ENST00000556170 THSD1Q9NS62 852 aa13.94□□□□□ -0.18
NEK9-209ENST00000556170 ADAM30Q9UKF2 790 aa13.94□□□□□ -0.18
NEK9-209ENST00000556170 SGK494L7N484 410 aa13.94□□□□□ -0.18
NEK9-209ENST00000556170 CLDN4O14493 209 aa13.94□□□□□ -0.18
NEK9-209ENST00000556170 HMGN1P05114 100 aa13.94□□□□□ -0.18
NEK9-209ENST00000556170 PSKH1P11801 424 aa13.94□□□□□ -0.18
NEK9-209ENST00000556170 SDC2P34741 201 aa13.94□□□□□ -0.18
NEK9-209ENST00000556170 ZNF45Q02386 682 aa13.94□□□□□ -0.18
NEK9-209ENST00000556170 ZFP69Q49AA0 526 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms