RNA–Protein interactions for RNA: ENST00000555985.5

LINC00648-202, long intergenic non-protein coding RNA 648, humanhuman

TSL 2 BASIC

Gene LINC00648, Length 2,885 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-202ENST00000555985 SHANK1Q9Y566 2161 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 ZFYVE26Q68DK2 2539 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 FAM208BQ5VWN6 2430 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 GCN1Q92616 2671 aaKnown RBP3.64□□□□□ -1.83
LINC00648-202ENST00000555985 TRIM77I1YAP6 450 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 FFAR3O14843 346 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 GPR42O15529 346 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 PROM1O43490 865 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 H2AFYO75367 372 aaKnown RBP3.64□□□□□ -1.83
LINC00648-202ENST00000555985 MFN2O95140 757 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 SERPINA7P05543 415 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 CELA2AP08217 269 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 ITGAMP11215 1152 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 ACPPP15309 386 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 PRKACAP17612 351 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 HIST1H1TP22492 207 aaPredicted RBP3.64□□□□□ -1.83
LINC00648-202ENST00000555985 OTX2P32243 289 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 GALNSP34059 522 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 XCR1P46094 333 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 OR3A3P47888 321 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 AP2S1P53680 142 aaPredicted RBP3.64□□□□□ -1.83
LINC00648-202ENST00000555985 PLA2G16P53816 162 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 EMP2P54851 167 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 ABCE1P61221 599 aaKnown RBP3.64□□□□□ -1.83
LINC00648-202ENST00000555985 STXBP1P61764 594 aaKnown RBP3.64□□□□□ -1.83
LINC00648-202ENST00000555985 RAE1P78406 368 aaKnown RBP3.64□□□□□ -1.83
LINC00648-202ENST00000555985 TRAP1Q12931 704 aaKnown RBP3.64□□□□□ -1.83
LINC00648-202ENST00000555985 ART3Q13508 389 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 CEBPEQ15744 281 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 MAPK11Q15759 364 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 UGT3A2Q3SY77 523 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 DEFB134Q4QY38 66 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 PAGE2BQ5JRK9 111 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 CCNYL2Q5T2Q4 361 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 NDUFAF5Q5TEU4 345 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 FAM205BPQ63HN1 556 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 XAF1Q6GPH4 301 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 RPUSD3Q6P087 351 aaKnown RBP3.64□□□□□ -1.83
LINC00648-202ENST00000555985 RPS27LQ71UM5 84 aaKnown RBP3.64□□□□□ -1.83
LINC00648-202ENST00000555985 KCTD20Q7Z5Y7 419 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 FAM109AQ8N4B1 249 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 CBR4Q8N4T8 237 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 PIK3C3Q8NEB9 887 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 OR6Q1Q8NGQ2 317 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 OR6F1Q8NGZ6 308 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 ADAMTS18Q8TE60 1221 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 PPWD1Q96BP3 646 aaKnown RBP3.64□□□□□ -1.83
LINC00648-202ENST00000555985 TBC1D20Q96BZ9 403 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 CMTM7Q96FZ5 175 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 MAGED4Q96JG8 741 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 MAGEB10Q96LZ2 347 aaPredicted RBP3.64□□□□□ -1.83
LINC00648-202ENST00000555985 KCNC2Q96PR1 638 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 OR52B2Q96RD2 323 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 CRB3Q9BUF7 120 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 CHID1Q9BWS9 393 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 REXO4Q9GZR2 422 aaKnown RBP3.64□□□□□ -1.83
LINC00648-202ENST00000555985 IPPKQ9H8X2 491 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 OXSMQ9NWU1 459 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 HCN3Q9P1Z3 774 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 TRPC4Q9UBN4 977 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 ANAPC2Q9UJX6 822 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 ZNF221Q9UK13 617 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 CAB39Q9Y376 341 aaPredicted RBP3.64□□□□□ -1.83
LINC00648-202ENST00000555985 PCDHGB6Q9Y5F9 930 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 AHCTF1Q8WYP5 2266 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 SCN3AQ9NY46 2000 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 SYNDIG1LA6NDD5 238 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 OR2W5A6NFC9 320 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 URADA6NGE7 173 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 SAGE2PA6NJ88 616 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 SAC3D1A6NKF1 404 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 FAM227AF5H4B4 570 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 TMPRSS11DO60235 418 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 GLRA3O75311 464 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 EEDO75530 441 aaKnown RBP3.64□□□□□ -1.83
LINC00648-202ENST00000555985 TIPRLO75663 272 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 UPK1BO75841 260 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 CLDN9O95484 217 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 CLIC3O95833 236 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 DDAH2O95865 285 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 IGKV3-11P04433 115 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 C8orf89P0DMQ9 161 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 CFL1P23528 166 aaKnown RBP3.64□□□□□ -1.83
LINC00648-202ENST00000555985 ATP5F1P24539 256 aaPredicted RBP3.64□□□□□ -1.83
LINC00648-202ENST00000555985 CERS1P27544 350 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 CD40LGP29965 261 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 TRHRP34981 398 aaPredicted RBP3.64□□□□□ -1.83
LINC00648-202ENST00000555985 CAPGP40121 348 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 YAP1P46937 504 aaKnown RBP3.64□□□□□ -1.83
LINC00648-202ENST00000555985 PPP5CP53041 499 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 HSD17B7P56937 341 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 BTG2P78543 158 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 MRPS15P82914 257 aaKnown RBP3.64□□□□□ -1.83
LINC00648-202ENST00000555985 SRSF1Q07955 248 aaKnown RBP eCLIP3.64□□□□□ -1.83
LINC00648-202ENST00000555985 KLRB1Q12918 225 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 MFAP5Q13361 173 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 HIST2H2ACQ16777 129 aaPredicted RBP3.64□□□□□ -1.83
LINC00648-202ENST00000555985 ATAD3CQ5T2N8 411 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 CCNJQ5T5M9 372 aa3.64□□□□□ -1.83
LINC00648-202ENST00000555985 OR4C11Q6IEV9 310 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms