RNA–Protein interactions for RNA: ENST00000549007.1

APAF1-208, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 1 (best) BASIC

Gene APAF1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-208ENST00000549007 OR4L1Q8NH43 312 aa3.5□□□□□ -1.85
APAF1-208ENST00000549007 PATE1Q8WXA2 126 aa3.5□□□□□ -1.85
APAF1-208ENST00000549007 MUS81Q96NY9 551 aa3.5□□□□□ -1.85
APAF1-208ENST00000549007 OR6C1Q96RD1 312 aa3.5□□□□□ -1.85
APAF1-208ENST00000549007 NDNQ99608 321 aa3.5□□□□□ -1.85
APAF1-208ENST00000549007 NRTNQ99748 197 aa3.5□□□□□ -1.85
APAF1-208ENST00000549007 C1QTNF7Q9BXJ2 289 aa3.5□□□□□ -1.85
APAF1-208ENST00000549007 C1QTNF3Q9BXJ4 246 aa3.5□□□□□ -1.85
APAF1-208ENST00000549007 PARD6BQ9BYG5 372 aa3.5□□□□□ -1.85
APAF1-208ENST00000549007 CDC42EP4Q9H3Q1 356 aaKnown RBP3.5□□□□□ -1.85
APAF1-208ENST00000549007 GAREM1Q9H706 876 aa3.5□□□□□ -1.85
APAF1-208ENST00000549007 PHPT1Q9NRX4 125 aaPredicted RBP3.5□□□□□ -1.85
APAF1-208ENST00000549007 SEMA4GQ9NTN9 838 aa3.5□□□□□ -1.85
APAF1-208ENST00000549007 SLC23A2Q9UGH3 650 aa3.5□□□□□ -1.85
APAF1-208ENST00000549007 CIDEBQ9UHD4 219 aa3.5□□□□□ -1.85
APAF1-208ENST00000549007 ING1Q9UK53 422 aaPredicted RBP3.5□□□□□ -1.85
APAF1-208ENST00000549007 RUVBL2Q9Y230 463 aaKnown RBP3.5□□□□□ -1.85
APAF1-208ENST00000549007 FANCMQ8IYD8 2048 aa3.5□□□□□ -1.85
APAF1-208ENST00000549007 PLXND1Q9Y4D7 1925 aa3.5□□□□□ -1.85
APAF1-208ENST00000549007 ASCC3Q8N3C0 2202 aaKnown RBP3.5□□□□□ -1.85
APAF1-208ENST00000549007 C5orf51A6NDU8 294 aa3.5□□□□□ -1.85
APAF1-208ENST00000549007 CTDSPLO15194 276 aa3.5□□□□□ -1.85
APAF1-208ENST00000549007 HSPA12AO43301 675 aa3.5□□□□□ -1.85
APAF1-208ENST00000549007 PPFIA2O75334 1257 aa3.5□□□□□ -1.85
APAF1-208ENST00000549007 CDK14O94921 469 aa3.5□□□□□ -1.85
APAF1-208ENST00000549007 BAG2O95816 211 aa3.5□□□□□ -1.85
APAF1-208ENST00000549007 RLN1P04808 185 aa3.5□□□□□ -1.85
APAF1-208ENST00000549007 RETP07949 1114 aa3.5□□□□□ -1.85
APAF1-208ENST00000549007 VIMP08670 466 aaKnown RBP3.5□□□□□ -1.85
APAF1-208ENST00000549007 ACP2P11117 423 aa3.5□□□□□ -1.85
APAF1-208ENST00000549007 CD22P20273 847 aa3.5□□□□□ -1.85
APAF1-208ENST00000549007 ISL1P61371 349 aa3.5□□□□□ -1.85
APAF1-208ENST00000549007 NPRL3Q12980 569 aa3.5□□□□□ -1.85
APAF1-208ENST00000549007 DUOXA1Q1HG43 343 aa3.5□□□□□ -1.85
APAF1-208ENST00000549007 DEFB133Q30KQ1 61 aa3.5□□□□□ -1.85
APAF1-208ENST00000549007 FASTKD1Q53R41 847 aaKnown RBP3.5□□□□□ -1.85
APAF1-208ENST00000549007 TYW3Q6IPR3 259 aaKnown RBP3.5□□□□□ -1.85
APAF1-208ENST00000549007 NEPROQ6NW34 567 aa3.5□□□□□ -1.85
APAF1-208ENST00000549007 AFTPHQ6ULP2 937 aa3.5□□□□□ -1.85
APAF1-208ENST00000549007 SNX20Q7Z614 316 aa3.5□□□□□ -1.85
APAF1-208ENST00000549007 CNTN4Q8IWV2 1026 aa3.5□□□□□ -1.85
APAF1-208ENST00000549007 MCEMP1Q8IX19 187 aa3.5□□□□□ -1.85
APAF1-208ENST00000549007 BBOF1Q8ND07 529 aa3.5□□□□□ -1.85
APAF1-208ENST00000549007 OR56A4Q8NGH8 313 aa3.5□□□□□ -1.85
APAF1-208ENST00000549007 LMX1AQ8TE12 382 aa3.5□□□□□ -1.85
APAF1-208ENST00000549007 PDLIM5Q96HC4 596 aaKnown RBP3.5□□□□□ -1.85
APAF1-208ENST00000549007 CAMK1GQ96NX5 476 aa3.5□□□□□ -1.85
APAF1-208ENST00000549007 RANBP9Q96S59 729 aa3.5□□□□□ -1.85
APAF1-208ENST00000549007 ZSCAN5AQ9BUG6 496 aa3.5□□□□□ -1.85
APAF1-208ENST00000549007 EDEM2Q9BV94 578 aa3.5□□□□□ -1.85
APAF1-208ENST00000549007 ZNF747Q9BV97 191 aa3.5□□□□□ -1.85
APAF1-208ENST00000549007 GALPQ9UBC7 116 aa3.5□□□□□ -1.85
APAF1-208ENST00000549007 MTRF1LQ9UGC7 380 aaKnown RBP3.5□□□□□ -1.85
APAF1-208ENST00000549007 PACSIN3Q9UKS6 424 aa3.5□□□□□ -1.85
APAF1-208ENST00000549007 KCNS2Q9ULS6 477 aa3.5□□□□□ -1.85
APAF1-208ENST00000549007 PSMD13Q9UNM6 376 aa3.5□□□□□ -1.85
APAF1-208ENST00000549007 BTBD3Q9Y2F9 522 aa3.5□□□□□ -1.85
APAF1-208ENST00000549007 TMED3Q9Y3Q3 217 aa3.5□□□□□ -1.85
APAF1-208ENST00000549007 RALGAPA1Q6GYQ0 2036 aa3.5□□□□□ -1.85
APAF1-208ENST00000549007 DMXL1Q9Y485 3027 aa3.5□□□□□ -1.85
APAF1-208ENST00000549007 SPTBN4Q9H254 2564 aa3.49□□□□□ -1.85
APAF1-208ENST00000549007 SPTY2D1-AS1A0A0U1RR47 76 aa3.49□□□□□ -1.85
APAF1-208ENST00000549007 TCRBV9S1A1TA0A576 114 aa3.49□□□□□ -1.85
APAF1-208ENST00000549007 C4orf47A7E2U8 309 aa3.49□□□□□ -1.85
APAF1-208ENST00000549007 E7ESA3 106 aa3.49□□□□□ -1.85
APAF1-208ENST00000549007 NIPSNAP2O75323 286 aa3.49□□□□□ -1.85
APAF1-208ENST00000549007 NDUFB4O95168 129 aa3.49□□□□□ -1.85
APAF1-208ENST00000549007 TRIM16O95361 564 aa3.49□□□□□ -1.85
APAF1-208ENST00000549007 EML2O95834 649 aa3.49□□□□□ -1.85
APAF1-208ENST00000549007 LINGO3P0C6S8 592 aa3.49□□□□□ -1.85
APAF1-208ENST00000549007 EPORP19235 508 aa3.49□□□□□ -1.85
APAF1-208ENST00000549007 MSH3P20585 1137 aa3.49□□□□□ -1.85
APAF1-208ENST00000549007 JAK1P23458 1154 aa3.49□□□□□ -1.85
APAF1-208ENST00000549007 TRIM23P36406 574 aa3.49□□□□□ -1.85
APAF1-208ENST00000549007 ATXN3P54252 364 aaPredicted RBP3.49□□□□□ -1.85
APAF1-208ENST00000549007 DCDC1P59894 354 aa3.49□□□□□ -1.85
APAF1-208ENST00000549007 SRP54P61011 504 aaKnown RBP3.49□□□□□ -1.85
APAF1-208ENST00000549007 CACNG1Q06432 222 aa3.49□□□□□ -1.85
APAF1-208ENST00000549007 DPTQ07507 201 aa3.49□□□□□ -1.85
APAF1-208ENST00000549007 HSPB3Q12988 150 aa3.49□□□□□ -1.85
APAF1-208ENST00000549007 KBTBD12Q3ZCT8 623 aa3.49□□□□□ -1.85
APAF1-208ENST00000549007 IQCCQ4KMZ1 466 aa3.49□□□□□ -1.85
APAF1-208ENST00000549007 C6orf136Q5SQH8 315 aa3.49□□□□□ -1.85
APAF1-208ENST00000549007 SHEQ5VZ18 495 aa3.49□□□□□ -1.85
APAF1-208ENST00000549007 TMEM220Q6QAJ8 160 aa3.49□□□□□ -1.85
APAF1-208ENST00000549007 LINC00696Q6ZRV3 163 aa3.49□□□□□ -1.85
APAF1-208ENST00000549007 C3orf62Q6ZUJ4 267 aa3.49□□□□□ -1.85
APAF1-208ENST00000549007 TMEM135Q86UB9 458 aa3.49□□□□□ -1.85
APAF1-208ENST00000549007 PIM3Q86V86 326 aa3.49□□□□□ -1.85
APAF1-208ENST00000549007 PARGQ86W56 976 aa3.49□□□□□ -1.85
APAF1-208ENST00000549007 ZNF547Q8IVP9 402 aa3.49□□□□□ -1.85
APAF1-208ENST00000549007 LMNTD1Q8N9Z9 388 aa3.49□□□□□ -1.85
APAF1-208ENST00000549007 TEX45Q8NA69 505 aa3.49□□□□□ -1.85
APAF1-208ENST00000549007 DENND6BQ8NEG7 585 aa3.49□□□□□ -1.85
APAF1-208ENST00000549007 UBLCP1Q8WVY7 318 aaPredicted RBP3.49□□□□□ -1.85
APAF1-208ENST00000549007 TMEM131Q92545 1883 aa3.49□□□□□ -1.85
APAF1-208ENST00000549007 CERS2Q96G23 380 aa3.49□□□□□ -1.85
APAF1-208ENST00000549007 COX14Q96I36 57 aa3.49□□□□□ -1.85
APAF1-208ENST00000549007 SFXN2Q96NB2 322 aa3.49□□□□□ -1.85
APAF1-208ENST00000549007 TTC25Q96NG3 672 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms