RNA–Protein interactions for RNA: ENST00000513525.1

CCL28-203, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best) BASIC

Gene CCL28, Length 1,518 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-203ENST00000513525 NPIPA1Q9UND3 350 aa9.12□□□□□ -0.95
CCL28-203ENST00000513525 CLCA3PQ9Y6N3 262 aa9.12□□□□□ -0.95
CCL28-203ENST00000513525 ADGRG4Q8IZF6 3080 aa9.12□□□□□ -0.95
CCL28-203ENST00000513525 INTS1Q8N201 2190 aaKnown RBP9.12□□□□□ -0.95
CCL28-203ENST00000513525 TMEM200CA6NKL6 621 aa9.11□□□□□ -0.95
CCL28-203ENST00000513525 C9JVG2 144 aa9.11□□□□□ -0.95
CCL28-203ENST00000513525 H0YIV9 168 aa9.11□□□□□ -0.95
CCL28-203ENST00000513525 PRKNO60260 465 aaPredicted RBP9.11□□□□□ -0.95
CCL28-203ENST00000513525 RPSAP08865 295 aaKnown RBP9.11□□□□□ -0.95
CCL28-203ENST00000513525 BCKDHAP12694 445 aa9.11□□□□□ -0.95
CCL28-203ENST00000513525 TCN1P20061 433 aaPredicted RBP9.11□□□□□ -0.95
CCL28-203ENST00000513525 HIST1H1TP22492 207 aaPredicted RBP9.11□□□□□ -0.95
CCL28-203ENST00000513525 SLC7A1P30825 629 aa9.11□□□□□ -0.95
CCL28-203ENST00000513525 MSX2P35548 267 aaPredicted RBP9.11□□□□□ -0.95
CCL28-203ENST00000513525 PIK3CBP42338 1070 aa9.11□□□□□ -0.95
CCL28-203ENST00000513525 MEOX1P50221 254 aa9.11□□□□□ -0.95
CCL28-203ENST00000513525 ERFP50548 548 aa9.11□□□□□ -0.95
CCL28-203ENST00000513525 SSR4P51571 173 aa9.11□□□□□ -0.95
CCL28-203ENST00000513525 CLDN8P56748 225 aa9.11□□□□□ -0.95
CCL28-203ENST00000513525 IGLV3-21P80748 117 aaPredicted RBP9.11□□□□□ -0.95
CCL28-203ENST00000513525 HMGCS1Q01581 520 aa9.11□□□□□ -0.95
CCL28-203ENST00000513525 STX4Q12846 297 aa9.11□□□□□ -0.95
CCL28-203ENST00000513525 TRIP10Q15642 601 aa9.11□□□□□ -0.95
CCL28-203ENST00000513525 FXNQ16595 210 aa9.11□□□□□ -0.95
CCL28-203ENST00000513525 C4orf48Q5BLP8 95 aa9.11□□□□□ -0.95
CCL28-203ENST00000513525 PAGE3Q5JUK9 113 aa9.11□□□□□ -0.95
CCL28-203ENST00000513525 DEPDC1Q5TB30 811 aa9.11□□□□□ -0.95
CCL28-203ENST00000513525 KHDRBS2Q5VWX1 349 aaKnown RBP9.11□□□□□ -0.95
CCL28-203ENST00000513525 IZUMO2Q6UXV1 221 aa9.11□□□□□ -0.95
CCL28-203ENST00000513525 MSANTD1Q6ZTZ1 278 aa9.11□□□□□ -0.95
CCL28-203ENST00000513525 SULF2Q8IWU5 870 aa9.11□□□□□ -0.95
CCL28-203ENST00000513525 LIX1Q8N485 282 aa9.11□□□□□ -0.95
CCL28-203ENST00000513525 ZFP62Q8NB50 900 aaPredicted RBP9.11□□□□□ -0.95
CCL28-203ENST00000513525 FAM156AQ8NDB6 213 aa9.11□□□□□ -0.95
CCL28-203ENST00000513525 OR8J3Q8NGG0 315 aa9.11□□□□□ -0.95
CCL28-203ENST00000513525 OR8K3Q8NH51 312 aa9.11□□□□□ -0.95
CCL28-203ENST00000513525 PHF10Q8WUB8 498 aaKnown RBP9.11□□□□□ -0.95
CCL28-203ENST00000513525 PTPMT1Q8WUK0 201 aaPredicted RBP9.11□□□□□ -0.95
CCL28-203ENST00000513525 REPS1Q96D71 796 aa9.11□□□□□ -0.95
CCL28-203ENST00000513525 HBEGFQ99075 208 aa9.11□□□□□ -0.95
CCL28-203ENST00000513525 SLC39A3Q9BRY0 314 aa9.11□□□□□ -0.95
CCL28-203ENST00000513525 ALOXE3Q9BYJ1 711 aa9.11□□□□□ -0.95
CCL28-203ENST00000513525 BRF2Q9HAW0 419 aa9.11□□□□□ -0.95
CCL28-203ENST00000513525 IL1RL2Q9HB29 575 aa9.11□□□□□ -0.95
CCL28-203ENST00000513525 PGPEP1Q9NXJ5 209 aa9.11□□□□□ -0.95
CCL28-203ENST00000513525 ACTR3BQ9P1U1 418 aa9.11□□□□□ -0.95
CCL28-203ENST00000513525 MYOTQ9UBF9 498 aa9.11□□□□□ -0.95
CCL28-203ENST00000513525 RIMS3Q9UJD0 308 aa9.11□□□□□ -0.95
CCL28-203ENST00000513525 MAPRE3Q9UPY8 281 aa9.11□□□□□ -0.95
CCL28-203ENST00000513525 AP4S1Q9Y587 144 aa9.11□□□□□ -0.95
CCL28-203ENST00000513525 SPACA6W5XKT8 324 aa9.11□□□□□ -0.95
CCL28-203ENST00000513525 CSMD2Q7Z408 3487 aa9.11□□□□□ -0.95
CCL28-203ENST00000513525 RTCAO00442 366 aaKnown RBP9.1□□□□□ -0.95
CCL28-203ENST00000513525 TFECO14948 347 aaPredicted RBP9.1□□□□□ -0.95
CCL28-203ENST00000513525 LDB3O75112 727 aa9.1□□□□□ -0.95
CCL28-203ENST00000513525 KCNH1O95259 989 aa9.1□□□□□ -0.95
CCL28-203ENST00000513525 TGFB1P01137 390 aa9.1□□□□□ -0.95
CCL28-203ENST00000513525 IFNA16P05015 189 aa9.1□□□□□ -0.95
CCL28-203ENST00000513525 PCNAP12004 261 aa9.1□□□□□ -0.95
CCL28-203ENST00000513525 ABOP16442 354 aa9.1□□□□□ -0.95
CCL28-203ENST00000513525 HTR1EP28566 365 aa9.1□□□□□ -0.95
CCL28-203ENST00000513525 SSR2P43308 183 aa9.1□□□□□ -0.95
CCL28-203ENST00000513525 GSK3BP49841 420 aa9.1□□□□□ -0.95
CCL28-203ENST00000513525 SMSP52788 366 aa9.1□□□□□ -0.95
CCL28-203ENST00000513525 C21orf58P58505 322 aa9.1□□□□□ -0.95
CCL28-203ENST00000513525 BIKQ13323 160 aa9.1□□□□□ -0.95
CCL28-203ENST00000513525 CAPRIN1Q14444 709 aaKnown RBP9.1□□□□□ -0.95
CCL28-203ENST00000513525 ZNF630Q2M218 657 aaPredicted RBP9.1□□□□□ -0.95
CCL28-203ENST00000513525 OR4C11Q6IEV9 310 aa9.1□□□□□ -0.95
CCL28-203ENST00000513525 NANOGP8Q6NSW7 305 aa9.1□□□□□ -0.95
CCL28-203ENST00000513525 DLEU7Q6UYE1 221 aa9.1□□□□□ -0.95
CCL28-203ENST00000513525 HSDL2Q6YN16 418 aa9.1□□□□□ -0.95
CCL28-203ENST00000513525 MDGA2Q7Z553 956 aa9.1□□□□□ -0.95
CCL28-203ENST00000513525 EID3Q8N140 333 aa9.1□□□□□ -0.95
CCL28-203ENST00000513525 ZCCHC7Q8N3Z6 543 aaKnown RBP9.1□□□□□ -0.95
CCL28-203ENST00000513525 PSD4Q8NDX1 1056 aa9.1□□□□□ -0.95
CCL28-203ENST00000513525 WDR20Q8TBZ3 569 aa9.1□□□□□ -0.95
CCL28-203ENST00000513525 TESCQ96BS2 214 aa9.1□□□□□ -0.95
CCL28-203ENST00000513525 BTBD9Q96Q07 612 aa9.1□□□□□ -0.95
CCL28-203ENST00000513525 CGREF1Q99674 301 aa9.1□□□□□ -0.95
CCL28-203ENST00000513525 SH3GL1Q99961 368 aa9.1□□□□□ -0.95
CCL28-203ENST00000513525 KCTD14Q9BQ13 255 aaPredicted RBP9.1□□□□□ -0.95
CCL28-203ENST00000513525 PCDHAC1Q9H158 963 aa9.1□□□□□ -0.95
CCL28-203ENST00000513525 ALG2Q9H553 416 aa9.1□□□□□ -0.95
CCL28-203ENST00000513525 NANOGQ9H9S0 305 aa9.1□□□□□ -0.95
CCL28-203ENST00000513525 CHST11Q9NPF2 352 aa9.1□□□□□ -0.95
CCL28-203ENST00000513525 TIMMDC1Q9NPL8 285 aa9.1□□□□□ -0.95
CCL28-203ENST00000513525 DMRT3Q9NQL9 472 aa9.1□□□□□ -0.95
CCL28-203ENST00000513525 ARMC1Q9NVT9 282 aa9.1□□□□□ -0.95
CCL28-203ENST00000513525 MS4A12Q9NXJ0 267 aa9.1□□□□□ -0.95
CCL28-203ENST00000513525 MEMO1Q9Y316 297 aa9.1□□□□□ -0.95
CCL28-203ENST00000513525 PCDHGA11Q9Y5H2 935 aa9.1□□□□□ -0.95
CCL28-203ENST00000513525 SNX13Q9Y5W8 968 aa9.1□□□□□ -0.95
CCL28-203ENST00000513525 FBN2P35556 2912 aa9.1□□□□□ -0.95
CCL28-203ENST00000513525 PDZD2O15018 2839 aa9.1□□□□□ -0.95
CCL28-203ENST00000513525 ARHGAP10A1A4S6 786 aa9.1□□□□□ -0.95
CCL28-203ENST00000513525 A8MVJ9 347 aa9.1□□□□□ -0.95
CCL28-203ENST00000513525 C17orf105B2RV13 164 aa9.1□□□□□ -0.95
CCL28-203ENST00000513525 E9PLN8 166 aa9.1□□□□□ -0.95
CCL28-203ENST00000513525 H0YJX3 145 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms