RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 GSSP48637 474 aa8.63□□□□□ -1.03
HTT-205ENST00000509043 MASP1P48740 699 aa8.63□□□□□ -1.03
HTT-205ENST00000509043 PDX1P52945 283 aa8.63□□□□□ -1.03
HTT-205ENST00000509043 PSMD4P55036 377 aaKnown RBP8.63□□□□□ -1.03
HTT-205ENST00000509043 HSD17B7P56937 341 aa8.63□□□□□ -1.03
HTT-205ENST00000509043 IGLV3-21P80748 117 aaPredicted RBP8.63□□□□□ -1.03
HTT-205ENST00000509043 SHC2P98077 582 aa8.63□□□□□ -1.03
HTT-205ENST00000509043 TSPAN31Q12999 210 aa8.63□□□□□ -1.03
HTT-205ENST00000509043 C1orf61Q13536 156 aa8.63□□□□□ -1.03
HTT-205ENST00000509043 SERTAD2Q14140 314 aa8.63□□□□□ -1.03
HTT-205ENST00000509043 GAS6Q14393 721 aa8.63□□□□□ -1.03
HTT-205ENST00000509043 IRF3Q14653 427 aa8.63□□□□□ -1.03
HTT-205ENST00000509043 NCF4Q15080 339 aa8.63□□□□□ -1.03
HTT-205ENST00000509043 CTF1Q16619 201 aa8.63□□□□□ -1.03
HTT-205ENST00000509043 SMN1Q16637 294 aaKnown RBP8.63□□□□□ -1.03
HTT-205ENST00000509043 DUSP5Q16690 384 aa8.63□□□□□ -1.03
HTT-205ENST00000509043 ZNF829Q3KNS6 432 aaPredicted RBP8.63□□□□□ -1.03
HTT-205ENST00000509043 ZNF542PQ5EBM4 170 aa8.63□□□□□ -1.03
HTT-205ENST00000509043 WDR45BQ5MNZ6 344 aa8.63□□□□□ -1.03
HTT-205ENST00000509043 C6orf132Q5T0Z8 1188 aa8.63□□□□□ -1.03
HTT-205ENST00000509043 DCST2Q5T1A1 773 aa8.63□□□□□ -1.03
HTT-205ENST00000509043 PLAG1Q6DJT9 500 aa8.63□□□□□ -1.03
HTT-205ENST00000509043 LAIR1Q6GTX8 287 aa8.63□□□□□ -1.03
HTT-205ENST00000509043 TYW3Q6IPR3 259 aaKnown RBP8.63□□□□□ -1.03
HTT-205ENST00000509043 FAM111BQ6SJ93 734 aa8.63□□□□□ -1.03
HTT-205ENST00000509043 SLC16A12Q6ZSM3 486 aa8.63□□□□□ -1.03
HTT-205ENST00000509043 RASSF6Q6ZTQ3 369 aa8.63□□□□□ -1.03
HTT-205ENST00000509043 PLEKHM3Q6ZWE6 761 aa8.63□□□□□ -1.03
HTT-205ENST00000509043 MRGPREQ86SM8 312 aa8.63□□□□□ -1.03
HTT-205ENST00000509043 RBM45Q8IUH3 476 aaKnown RBP8.63□□□□□ -1.03
HTT-205ENST00000509043 LACC1Q8IV20 430 aa8.63□□□□□ -1.03
HTT-205ENST00000509043 CCDC103Q8IW40 242 aa8.63□□□□□ -1.03
HTT-205ENST00000509043 RNF113BQ8IZP6 322 aaKnown RBP8.63□□□□□ -1.03
HTT-205ENST00000509043 CYP4Z2PQ8N1L4 340 aa8.63□□□□□ -1.03
HTT-205ENST00000509043 SLC43A2Q8N370 569 aa8.63□□□□□ -1.03
HTT-205ENST00000509043 VWA5B2Q8N398 1253 aa8.63□□□□□ -1.03
HTT-205ENST00000509043 COX18Q8N8Q8 333 aa8.63□□□□□ -1.03
HTT-205ENST00000509043 SLC16A11Q8NCK7 471 aa8.63□□□□□ -1.03
HTT-205ENST00000509043 LMX1AQ8TE12 382 aa8.63□□□□□ -1.03
HTT-205ENST00000509043 GAB3Q8WWW8 586 aa8.63□□□□□ -1.03
HTT-205ENST00000509043 DNASE2BQ8WZ79 361 aa8.63□□□□□ -1.03
HTT-205ENST00000509043 SLC9A6Q92581 669 aa8.63□□□□□ -1.03
HTT-205ENST00000509043 SGCDQ92629 289 aa8.63□□□□□ -1.03
HTT-205ENST00000509043 OSTF1Q92882 214 aa8.63□□□□□ -1.03
HTT-205ENST00000509043 CDS1Q92903 461 aa8.63□□□□□ -1.03
HTT-205ENST00000509043 BORCS5Q969J3 196 aa8.63□□□□□ -1.03
HTT-205ENST00000509043 SDF2Q99470 211 aa8.63□□□□□ -1.03
HTT-205ENST00000509043 LMF2Q9BU23 707 aaKnown RBP8.63□□□□□ -1.03
HTT-205ENST00000509043 RSPO3Q9BXY4 272 aaPredicted RBP8.63□□□□□ -1.03
HTT-205ENST00000509043 TPSD1Q9BZJ3 242 aa8.63□□□□□ -1.03
HTT-205ENST00000509043 ERVMER34-1Q9H9K5 563 aa8.63□□□□□ -1.03
HTT-205ENST00000509043 LIN28AQ9H9Z2 209 aaKnown RBP8.63□□□□□ -1.03
HTT-205ENST00000509043 PDE7BQ9NP56 450 aa8.63□□□□□ -1.03
HTT-205ENST00000509043 MED17Q9NVC6 651 aa8.63□□□□□ -1.03
HTT-205ENST00000509043 MAT2BQ9NZL9 334 aa8.63□□□□□ -1.03
HTT-205ENST00000509043 TESQ9UGI8 421 aaKnown RBP8.63□□□□□ -1.03
HTT-205ENST00000509043 KCNE3Q9Y6H6 103 aa8.63□□□□□ -1.03
HTT-205ENST00000509043 MYO9BQ13459 2157 aa8.63□□□□□ -1.03
HTT-205ENST00000509043 FANCMQ8IYD8 2048 aa8.63□□□□□ -1.03
HTT-205ENST00000509043 MDC1Q14676 2089 aaKnown RBP8.62□□□□□ -1.03
HTT-205ENST00000509043 A0A1W2PS29 197 aa8.62□□□□□ -1.03
HTT-205ENST00000509043 SLC9B1P1A6NJY1 282 aa8.62□□□□□ -1.03
HTT-205ENST00000509043 M0R3G1 203 aa8.62□□□□□ -1.03
HTT-205ENST00000509043 CHST10O43529 356 aa8.62□□□□□ -1.03
HTT-205ENST00000509043 OR10H2O60403 315 aa8.62□□□□□ -1.03
HTT-205ENST00000509043 WNT1P04628 370 aa8.62□□□□□ -1.03
HTT-205ENST00000509043 TYRP1P17643 537 aa8.62□□□□□ -1.03
HTT-205ENST00000509043 MMP11P24347 488 aa8.62□□□□□ -1.03
HTT-205ENST00000509043 POU1F1P28069 291 aa8.62□□□□□ -1.03
HTT-205ENST00000509043 UGT2B10P36537 528 aa8.62□□□□□ -1.03
HTT-205ENST00000509043 MLLT3P42568 568 aaPredicted RBP8.62□□□□□ -1.03
HTT-205ENST00000509043 GIPRP48546 466 aa8.62□□□□□ -1.03
HTT-205ENST00000509043 PCYT1AP49585 367 aa8.62□□□□□ -1.03
HTT-205ENST00000509043 C21orf59P57076 290 aa8.62□□□□□ -1.03
HTT-205ENST00000509043 EEF1A1P68104 462 aaKnown RBP8.62□□□□□ -1.03
HTT-205ENST00000509043 POU6F2P78424 691 aaPredicted RBP8.62□□□□□ -1.03
HTT-205ENST00000509043 CDK5Q00535 292 aa8.62□□□□□ -1.03
HTT-205ENST00000509043 RHAGQ02094 409 aa8.62□□□□□ -1.03
HTT-205ENST00000509043 RPL6Q02878 288 aaKnown RBP8.62□□□□□ -1.03
HTT-205ENST00000509043 OCA2Q04671 838 aa8.62□□□□□ -1.03
HTT-205ENST00000509043 PIGFQ07326 219 aa8.62□□□□□ -1.03
HTT-205ENST00000509043 MGAT2Q10469 447 aa8.62□□□□□ -1.03
HTT-205ENST00000509043 ST3GAL4Q11206 333 aa8.62□□□□□ -1.03
HTT-205ENST00000509043 GRM7Q14831 915 aa8.62□□□□□ -1.03
HTT-205ENST00000509043 DGUOKQ16854 277 aa8.62□□□□□ -1.03
HTT-205ENST00000509043 C14orf28Q4W4Y0 310 aa8.62□□□□□ -1.03
HTT-205ENST00000509043 KLHL22Q53GT1 634 aa8.62□□□□□ -1.03
HTT-205ENST00000509043 MFSD4BQ5TF39 518 aa8.62□□□□□ -1.03
HTT-205ENST00000509043 YOD1Q5VVQ6 348 aaPredicted RBP8.62□□□□□ -1.03
HTT-205ENST00000509043 RPL13AP3Q6NVV1 102 aa8.62□□□□□ -1.03
HTT-205ENST00000509043 ZNF730Q6ZMV8 503 aa8.62□□□□□ -1.03
HTT-205ENST00000509043 MAMSTRQ6ZN01 415 aa8.62□□□□□ -1.03
HTT-205ENST00000509043 CCDC81Q6ZN84 652 aa8.62□□□□□ -1.03
HTT-205ENST00000509043 ZER1Q7Z7L7 766 aa8.62□□□□□ -1.03
HTT-205ENST00000509043 GRAMD2AQ8IUY3 354 aa8.62□□□□□ -1.03
HTT-205ENST00000509043 GALNT12Q8IXK2 581 aa8.62□□□□□ -1.03
HTT-205ENST00000509043 CMIPQ8IY22 773 aa8.62□□□□□ -1.03
HTT-205ENST00000509043 UBALD2Q8IYN6 164 aa8.62□□□□□ -1.03
HTT-205ENST00000509043 B3GNT7Q8NFL0 401 aa8.62□□□□□ -1.03
HTT-205ENST00000509043 TEX47Q8TBZ9 253 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms