RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 SNUPNO95149 360 aaKnown RBP8.34□□□□□ -1.07
HDAC6-232ENST00000489053 ZWINTO95229 277 aa8.34□□□□□ -1.07
HDAC6-232ENST00000489053 ACTL6AO96019 429 aa8.34□□□□□ -1.07
HDAC6-232ENST00000489053 IL2RAP01589 272 aa8.34□□□□□ -1.07
HDAC6-232ENST00000489053 SERPINE1P05121 402 aa8.34□□□□□ -1.07
HDAC6-232ENST00000489053 HPNP05981 417 aa8.34□□□□□ -1.07
HDAC6-232ENST00000489053 FGF4P08620 206 aa8.34□□□□□ -1.07
HDAC6-232ENST00000489053 GLI4P10075 376 aa8.34□□□□□ -1.07
HDAC6-232ENST00000489053 PRPS2P11908 318 aa8.34□□□□□ -1.07
HDAC6-232ENST00000489053 CYP4B1P13584 511 aa8.34□□□□□ -1.07
HDAC6-232ENST00000489053 SDC1P18827 310 aa8.34□□□□□ -1.07
HDAC6-232ENST00000489053 TCEA1P23193 301 aaKnown RBP8.34□□□□□ -1.07
HDAC6-232ENST00000489053 SSTR2P30874 369 aa8.34□□□□□ -1.07
HDAC6-232ENST00000489053 SERPINB4P48594 390 aa8.34□□□□□ -1.07
HDAC6-232ENST00000489053 PNLIPRP2P54317 469 aa8.34□□□□□ -1.07
HDAC6-232ENST00000489053 ZNF844Q08AG5 666 aa8.34□□□□□ -1.07
HDAC6-232ENST00000489053 STX5Q13190 355 aa8.34□□□□□ -1.07
HDAC6-232ENST00000489053 MYBPHQ13203 477 aa8.34□□□□□ -1.07
HDAC6-232ENST00000489053 CHI3L2Q15782 390 aa8.34□□□□□ -1.07
HDAC6-232ENST00000489053 HSPB2Q16082 182 aa8.34□□□□□ -1.07
HDAC6-232ENST00000489053 SLC25A35Q3KQZ1 300 aa8.34□□□□□ -1.07
HDAC6-232ENST00000489053 EMC4Q5J8M3 183 aa8.34□□□□□ -1.07
HDAC6-232ENST00000489053 WIPI1Q5MNZ9 446 aaPredicted RBP8.34□□□□□ -1.07
HDAC6-232ENST00000489053 CPTPQ5TA50 214 aa8.34□□□□□ -1.07
HDAC6-232ENST00000489053 YRDCQ86U90 279 aaKnown RBP8.34□□□□□ -1.07
HDAC6-232ENST00000489053 PLCZ1Q86YW0 608 aa8.34□□□□□ -1.07
HDAC6-232ENST00000489053 SIMC1Q8NDZ2 872 aa8.34□□□□□ -1.07
HDAC6-232ENST00000489053 FAM83FQ8NEG4 500 aaPredicted RBP8.34□□□□□ -1.07
HDAC6-232ENST00000489053 LILRB4Q8NHJ6 448 aa8.34□□□□□ -1.07
HDAC6-232ENST00000489053 SLC9A6Q92581 669 aa8.34□□□□□ -1.07
HDAC6-232ENST00000489053 HGDQ93099 445 aa8.34□□□□□ -1.07
HDAC6-232ENST00000489053 MTERF3Q96E29 417 aa8.34□□□□□ -1.07
HDAC6-232ENST00000489053 SLC35A4Q96G79 324 aa8.34□□□□□ -1.07
HDAC6-232ENST00000489053 PKNOX2Q96KN3 472 aa8.34□□□□□ -1.07
HDAC6-232ENST00000489053 SFXN2Q96NB2 322 aa8.34□□□□□ -1.07
HDAC6-232ENST00000489053 NODALQ96S42 347 aa8.34□□□□□ -1.07
HDAC6-232ENST00000489053 TTYH2Q9BSA4 534 aa8.34□□□□□ -1.07
HDAC6-232ENST00000489053 TNFRSF12AQ9NP84 129 aa8.34□□□□□ -1.07
HDAC6-232ENST00000489053 TAS2R10Q9NYW0 307 aa8.34□□□□□ -1.07
HDAC6-232ENST00000489053 BAIAP2L1Q9UHR4 511 aa8.34□□□□□ -1.07
HDAC6-232ENST00000489053 CBLCQ9ULV8 474 aa8.34□□□□□ -1.07
HDAC6-232ENST00000489053 SLC6A5Q9Y345 797 aa8.34□□□□□ -1.07
HDAC6-232ENST00000489053 PCDHGB3Q9Y5G1 929 aa8.34□□□□□ -1.07
HDAC6-232ENST00000489053 WIF1Q9Y5W5 379 aa8.34□□□□□ -1.07
HDAC6-232ENST00000489053 ADGRG4Q8IZF6 3080 aa8.34□□□□□ -1.07
HDAC6-232ENST00000489053 APCP25054 2843 aa8.34□□□□□ -1.07
HDAC6-232ENST00000489053 NKX2-6A6NCS4 301 aa8.33□□□□□ -1.08
HDAC6-232ENST00000489053 ENO4A6NNW6 628 aa8.33□□□□□ -1.08
HDAC6-232ENST00000489053 UPK1AO00322 258 aa8.33□□□□□ -1.08
HDAC6-232ENST00000489053 LSM1O15116 133 aaKnown RBP8.33□□□□□ -1.08
HDAC6-232ENST00000489053 SCAMP2O15127 329 aaKnown RBP8.33□□□□□ -1.08
HDAC6-232ENST00000489053 BIRC5O15392 142 aa8.33□□□□□ -1.08
HDAC6-232ENST00000489053 KRT16P08779 473 aa8.33□□□□□ -1.08
HDAC6-232ENST00000489053 ALOX5P09917 674 aa8.33□□□□□ -1.08
HDAC6-232ENST00000489053 BCKDHAP12694 445 aa8.33□□□□□ -1.08
HDAC6-232ENST00000489053 ATP6V1C1P21283 382 aa8.33□□□□□ -1.08
HDAC6-232ENST00000489053 GRK2P25098 689 aa8.33□□□□□ -1.08
HDAC6-232ENST00000489053 TACR1P25103 407 aa8.33□□□□□ -1.08
HDAC6-232ENST00000489053 PTPN6P29350 595 aa8.33□□□□□ -1.08
HDAC6-232ENST00000489053 GABRA3P34903 492 aa8.33□□□□□ -1.08
HDAC6-232ENST00000489053 EVI2BP34910 448 aa8.33□□□□□ -1.08
HDAC6-232ENST00000489053 SOAT1P35610 550 aa8.33□□□□□ -1.08
HDAC6-232ENST00000489053 SRYQ05066 204 aa8.33□□□□□ -1.08
HDAC6-232ENST00000489053 TP53BP2Q13625 1128 aa8.33□□□□□ -1.08
HDAC6-232ENST00000489053 CEBPEQ15744 281 aa8.33□□□□□ -1.08
HDAC6-232ENST00000489053 PDCD2Q16342 344 aaPredicted RBP8.33□□□□□ -1.08
HDAC6-232ENST00000489053 LSM12Q3MHD2 195 aaKnown RBP8.33□□□□□ -1.08
HDAC6-232ENST00000489053 RFTN2Q52LD8 501 aaPredicted RBP8.33□□□□□ -1.08
HDAC6-232ENST00000489053 EIPR1Q53HC9 387 aa8.33□□□□□ -1.08
HDAC6-232ENST00000489053 RIPPLY2Q5TAB7 128 aa8.33□□□□□ -1.08
HDAC6-232ENST00000489053 CROCCQ5TZA2 2017 aa8.33□□□□□ -1.08
HDAC6-232ENST00000489053 RAET1LQ5VY80 246 aa8.33□□□□□ -1.08
HDAC6-232ENST00000489053 OR5M10Q6IEU7 315 aa8.33□□□□□ -1.08
HDAC6-232ENST00000489053 TMEM81Q6P7N7 255 aa8.33□□□□□ -1.08
HDAC6-232ENST00000489053 NPSR1Q6W5P4 371 aa8.33□□□□□ -1.08
HDAC6-232ENST00000489053 RNF165Q6ZSG1 346 aa8.33□□□□□ -1.08
HDAC6-232ENST00000489053 ZNF551Q7Z340 670 aaPredicted RBP8.33□□□□□ -1.08
HDAC6-232ENST00000489053 LACC1Q8IV20 430 aa8.33□□□□□ -1.08
HDAC6-232ENST00000489053 OR2L13Q8N349 312 aa8.33□□□□□ -1.08
HDAC6-232ENST00000489053 MARVELD2Q8N4S9 558 aa8.33□□□□□ -1.08
HDAC6-232ENST00000489053 NATD1Q8N6N6 113 aa8.33□□□□□ -1.08
HDAC6-232ENST00000489053 COX18Q8N8Q8 333 aa8.33□□□□□ -1.08
HDAC6-232ENST00000489053 ANKRD42Q8N9B4 389 aa8.33□□□□□ -1.08
HDAC6-232ENST00000489053 CDRT4Q8N9R6 151 aa8.33□□□□□ -1.08
HDAC6-232ENST00000489053 NUP43Q8NFH3 380 aa8.33□□□□□ -1.08
HDAC6-232ENST00000489053 OR2T11Q8NH01 316 aa8.33□□□□□ -1.08
HDAC6-232ENST00000489053 FBXO30Q8TB52 745 aa8.33□□□□□ -1.08
HDAC6-232ENST00000489053 CIDECQ96AQ7 238 aaPredicted RBP8.33□□□□□ -1.08
HDAC6-232ENST00000489053 ZBTB9Q96C00 473 aa8.33□□□□□ -1.08
HDAC6-232ENST00000489053 ELP4Q96EB1 424 aa8.33□□□□□ -1.08
HDAC6-232ENST00000489053 C11orf24Q96F05 449 aaPredicted RBP8.33□□□□□ -1.08
HDAC6-232ENST00000489053 RMND5BQ96G75 393 aaPredicted RBP8.33□□□□□ -1.08
HDAC6-232ENST00000489053 ZNF764Q96H86 408 aaPredicted RBP8.33□□□□□ -1.08
HDAC6-232ENST00000489053 EGLN2Q96KS0 407 aa8.33□□□□□ -1.08
HDAC6-232ENST00000489053 PPP1R36Q96LQ0 422 aa8.33□□□□□ -1.08
HDAC6-232ENST00000489053 MS4A4EQ96PG1 132 aa8.33□□□□□ -1.08
HDAC6-232ENST00000489053 TRIB1Q96RU8 372 aa8.33□□□□□ -1.08
HDAC6-232ENST00000489053 SPOCK3Q9BQ16 436 aa8.33□□□□□ -1.08
HDAC6-232ENST00000489053 C1orf50Q9BV19 199 aa8.33□□□□□ -1.08
HDAC6-232ENST00000489053 PROK2Q9HC23 129 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms