RNA–Protein interactions for RNA: ENST00000458337.5

COMMD1-206, Transcript of copper metabolism domain containing 1, humanhuman

TSL 5

Gene COMMD1, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-206ENST00000458337 PCDHGB3Q9Y5G1 929 aa12.19□□□□□ -0.46
COMMD1-206ENST00000458337 PHF3Q92576 2039 aaKnown RBP12.19□□□□□ -0.46
COMMD1-206ENST00000458337 NOTCH2Q04721 2471 aa12.18□□□□□ -0.46
COMMD1-206ENST00000458337 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.18□□□□□ -0.46
COMMD1-206ENST00000458337 TRGV5A0A0B4J1U4 118 aa12.18□□□□□ -0.46
COMMD1-206ENST00000458337 A1L4Q6 167 aa12.18□□□□□ -0.46
COMMD1-206ENST00000458337 CYSRT1A8MQ03 144 aa12.18□□□□□ -0.46
COMMD1-206ENST00000458337 NPIPA2E9PIF3 369 aa12.18□□□□□ -0.46
COMMD1-206ENST00000458337 NPIPA3F8WFD2 350 aa12.18□□□□□ -0.46
COMMD1-206ENST00000458337 TPOP07202 933 aa12.18□□□□□ -0.46
COMMD1-206ENST00000458337 ENDOUP21128 410 aaKnown RBP12.18□□□□□ -0.46
COMMD1-206ENST00000458337 PTPN6P29350 595 aa12.18□□□□□ -0.46
COMMD1-206ENST00000458337 HPCAL1P37235 193 aa12.18□□□□□ -0.46
COMMD1-206ENST00000458337 MAN2A2P49641 1150 aa12.18□□□□□ -0.46
COMMD1-206ENST00000458337 CDK9P50750 372 aaKnown RBP12.18□□□□□ -0.46
COMMD1-206ENST00000458337 SMSP52788 366 aa12.18□□□□□ -0.46
COMMD1-206ENST00000458337 GAS1P54826 345 aa12.18□□□□□ -0.46
COMMD1-206ENST00000458337 MRPS22P82650 360 aaKnown RBP12.18□□□□□ -0.46
COMMD1-206ENST00000458337 HSPB3Q12988 150 aa12.18□□□□□ -0.46
COMMD1-206ENST00000458337 PDCD2Q16342 344 aaPredicted RBP12.18□□□□□ -0.46
COMMD1-206ENST00000458337 EXOSC6Q5RKV6 272 aaKnown RBP12.18□□□□□ -0.46
COMMD1-206ENST00000458337 CPTPQ5TA50 214 aa12.18□□□□□ -0.46
COMMD1-206ENST00000458337 ZCCHC12Q6PEW1 402 aa12.18□□□□□ -0.46
COMMD1-206ENST00000458337 CAMKMTQ7Z624 323 aa12.18□□□□□ -0.46
COMMD1-206ENST00000458337 CD163Q86VB7 1156 aa12.18□□□□□ -0.46
COMMD1-206ENST00000458337 WDSUB1Q8N9V3 476 aa12.18□□□□□ -0.46
COMMD1-206ENST00000458337 NUP43Q8NFH3 380 aa12.18□□□□□ -0.46
COMMD1-206ENST00000458337 OR1J4Q8NGS1 313 aa12.18□□□□□ -0.46
COMMD1-206ENST00000458337 NUDT8Q8WV74 236 aa12.18□□□□□ -0.46
COMMD1-206ENST00000458337 ARL8AQ96BM9 186 aa12.18□□□□□ -0.46
COMMD1-206ENST00000458337 SARAFQ96BY9 339 aa12.18□□□□□ -0.46
COMMD1-206ENST00000458337 GIMAP5Q96F15 307 aa12.18□□□□□ -0.46
COMMD1-206ENST00000458337 JSRP1Q96MG2 331 aaPredicted RBP12.18□□□□□ -0.46
COMMD1-206ENST00000458337 PRPF18Q99633 342 aaKnown RBP12.18□□□□□ -0.46
COMMD1-206ENST00000458337 TP63Q9H3D4 680 aaPredicted RBP12.18□□□□□ -0.46
COMMD1-206ENST00000458337 METTL7AQ9H8H3 244 aa12.18□□□□□ -0.46
COMMD1-206ENST00000458337 MEAF6Q9HAF1 191 aa12.18□□□□□ -0.46
COMMD1-206ENST00000458337 C3orf14Q9HBI5 128 aa12.18□□□□□ -0.46
COMMD1-206ENST00000458337 SIRT3Q9NTG7 399 aaPredicted RBP12.18□□□□□ -0.46
COMMD1-206ENST00000458337 ATAD3AQ9NVI7 634 aa12.18□□□□□ -0.46
COMMD1-206ENST00000458337 NKIRAS1Q9NYS0 192 aa12.18□□□□□ -0.46
COMMD1-206ENST00000458337 NOP53Q9NZM5 478 aaKnown RBP12.18□□□□□ -0.46
COMMD1-206ENST00000458337 CBLCQ9ULV8 474 aa12.18□□□□□ -0.46
COMMD1-206ENST00000458337 MAPRE3Q9UPY8 281 aa12.18□□□□□ -0.46
COMMD1-206ENST00000458337 C15orf41Q9Y2V0 281 aa12.18□□□□□ -0.46
COMMD1-206ENST00000458337 KLF2Q9Y5W3 355 aaPredicted RBP12.18□□□□□ -0.46
COMMD1-206ENST00000458337 A0A1W2PRB8 838 aa12.17□□□□□ -0.46
COMMD1-206ENST00000458337 PRAMEF25A6NGN4 478 aa12.17□□□□□ -0.46
COMMD1-206ENST00000458337 KLF11O14901 512 aa12.17□□□□□ -0.46
COMMD1-206ENST00000458337 SNPHO15079 494 aa12.17□□□□□ -0.46
COMMD1-206ENST00000458337 EMC8O43402 210 aa12.17□□□□□ -0.46
COMMD1-206ENST00000458337 FADS1O60427 444 aa12.17□□□□□ -0.46
COMMD1-206ENST00000458337 CBR3O75828 277 aa12.17□□□□□ -0.46
COMMD1-206ENST00000458337 NKX2-2O95096 273 aa12.17□□□□□ -0.46
COMMD1-206ENST00000458337 IL33O95760 270 aa12.17□□□□□ -0.46
COMMD1-206ENST00000458337 HOXD4P09016 255 aaPredicted RBP12.17□□□□□ -0.46
COMMD1-206ENST00000458337 GPC1P35052 558 aa12.17□□□□□ -0.46
COMMD1-206ENST00000458337 KRT20P35900 424 aa12.17□□□□□ -0.46
COMMD1-206ENST00000458337 ZNF155Q12901 538 aaPredicted RBP12.17□□□□□ -0.46
COMMD1-206ENST00000458337 ZNHIT3Q15649 155 aaPredicted RBP12.17□□□□□ -0.46
COMMD1-206ENST00000458337 ATG16L1Q676U5 607 aa12.17□□□□□ -0.46
COMMD1-206ENST00000458337 TMEM211Q6ICI0 200 aa12.17□□□□□ -0.46
COMMD1-206ENST00000458337 C3P1Q6ZMU1 363 aa12.17□□□□□ -0.46
COMMD1-206ENST00000458337 TRIM42Q8IWZ5 723 aa12.17□□□□□ -0.46
COMMD1-206ENST00000458337 MARVELD2Q8N4S9 558 aa12.17□□□□□ -0.46
COMMD1-206ENST00000458337 KRTCAP2Q8N6L1 136 aa12.17□□□□□ -0.46
COMMD1-206ENST00000458337 CDRT4Q8N9R6 151 aa12.17□□□□□ -0.46
COMMD1-206ENST00000458337 FAM110BQ8TC76 370 aa12.17□□□□□ -0.46
COMMD1-206ENST00000458337 OR5P2Q8WZ92 322 aa12.17□□□□□ -0.46
COMMD1-206ENST00000458337 OSBPL11Q9BXB4 747 aa12.17□□□□□ -0.46
COMMD1-206ENST00000458337 BHLHE41Q9C0J9 482 aaPredicted RBP12.17□□□□□ -0.46
COMMD1-206ENST00000458337 LDAHQ9H6V9 325 aa12.17□□□□□ -0.46
COMMD1-206ENST00000458337 MANSC1Q9H8J5 431 aa12.17□□□□□ -0.46
COMMD1-206ENST00000458337 GALNT9Q9HCQ5 603 aa12.17□□□□□ -0.46
COMMD1-206ENST00000458337 Q9N2J8 555 aa12.17□□□□□ -0.46
COMMD1-206ENST00000458337 PNPLA3Q9NST1 481 aa12.17□□□□□ -0.46
COMMD1-206ENST00000458337 SPRR3Q9UBC9 169 aa12.17□□□□□ -0.46
COMMD1-206ENST00000458337 MRPS18CQ9Y3D5 142 aaKnown RBP12.17□□□□□ -0.46
COMMD1-206ENST00000458337 OR10H1Q9Y4A9 318 aa12.17□□□□□ -0.46
COMMD1-206ENST00000458337 CACNA1CQ13936 2221 aa12.17□□□□□ -0.46
COMMD1-206ENST00000458337 MED12Q93074 2177 aa12.16□□□□□ -0.46
COMMD1-206ENST00000458337 C2orf72A6NCS6 295 aa12.16□□□□□ -0.46
COMMD1-206ENST00000458337 ANKRD28O15084 1053 aa12.16□□□□□ -0.46
COMMD1-206ENST00000458337 CYP4B1P13584 511 aa12.16□□□□□ -0.46
COMMD1-206ENST00000458337 H2AFXP16104 143 aaPredicted RBP12.16□□□□□ -0.46
COMMD1-206ENST00000458337 LBPP18428 481 aa12.16□□□□□ -0.46
COMMD1-206ENST00000458337 GDF1P27539 372 aa12.16□□□□□ -0.46
COMMD1-206ENST00000458337 IL12BP29460 328 aa12.16□□□□□ -0.46
COMMD1-206ENST00000458337 GABRA3P34903 492 aa12.16□□□□□ -0.46
COMMD1-206ENST00000458337 MASP1P48740 699 aa12.16□□□□□ -0.46
COMMD1-206ENST00000458337 DIO3P55073 304 aa12.16□□□□□ -0.46
COMMD1-206ENST00000458337 OCRLQ01968 901 aa12.16□□□□□ -0.46
COMMD1-206ENST00000458337 DECR1Q16698 335 aa12.16□□□□□ -0.46
COMMD1-206ENST00000458337 LSM12Q3MHD2 195 aaKnown RBP12.16□□□□□ -0.46
COMMD1-206ENST00000458337 VPS26BQ4G0F5 336 aa12.16□□□□□ -0.46
COMMD1-206ENST00000458337 NHSL2Q5HYW2 709 aa12.16□□□□□ -0.46
COMMD1-206ENST00000458337 HIST2H2BCQ6DN03 193 aa12.16□□□□□ -0.46
COMMD1-206ENST00000458337 OGFOD2Q6N063 350 aa12.16□□□□□ -0.46
COMMD1-206ENST00000458337 ANGPTL8Q6UXH0 198 aa12.16□□□□□ -0.46
COMMD1-206ENST00000458337 WDR53Q7Z5U6 358 aaPredicted RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms