RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 VAC14Q08AM6 782 aa12.42□□□□□ -0.42
PRPF39-202ENST00000424478 DEFB109BQ30KR1 87 aa12.42□□□□□ -0.42
PRPF39-202ENST00000424478 GLIPR1L2Q4G1C9 344 aa12.42□□□□□ -0.42
PRPF39-202ENST00000424478 DCST2Q5T1A1 773 aa12.42□□□□□ -0.42
PRPF39-202ENST00000424478 HLA-DQA1Q5Y7H0 255 aa12.42□□□□□ -0.42
PRPF39-202ENST00000424478 ARPINQ7Z6K5 226 aa12.42□□□□□ -0.42
PRPF39-202ENST00000424478 SERPINA11Q86U17 422 aa12.42□□□□□ -0.42
PRPF39-202ENST00000424478 GATSQ8NAP1 163 aa12.42□□□□□ -0.42
PRPF39-202ENST00000424478 TREX2Q9BQ50 279 aaPredicted RBP12.42□□□□□ -0.42
PRPF39-202ENST00000424478 DENND2DQ9H6A0 471 aaPredicted RBP12.42□□□□□ -0.42
PRPF39-202ENST00000424478 GPR55Q9Y2T6 319 aaPredicted RBP12.42□□□□□ -0.42
PRPF39-202ENST00000424478 PCDHGA6Q9Y5G7 932 aa12.42□□□□□ -0.42
PRPF39-202ENST00000424478 MED12Q93074 2177 aa12.42□□□□□ -0.42
PRPF39-202ENST00000424478 ATRXP46100 2492 aa12.42□□□□□ -0.42
PRPF39-202ENST00000424478 CXCR6O00574 342 aa12.42□□□□□ -0.42
PRPF39-202ENST00000424478 KCNK2O95069 426 aa12.42□□□□□ -0.42
PRPF39-202ENST00000424478 ITGA3P26006 1051 aa12.42□□□□□ -0.42
PRPF39-202ENST00000424478 MYBPC3Q14896 1274 aa12.42□□□□□ -0.42
PRPF39-202ENST00000424478 DCAF10Q5QP82 559 aa12.42□□□□□ -0.42
PRPF39-202ENST00000424478 ZNF468Q5VIY5 522 aaPredicted RBP12.42□□□□□ -0.42
PRPF39-202ENST00000424478 COMTD1Q86VU5 262 aa12.42□□□□□ -0.42
PRPF39-202ENST00000424478 CRELD1Q96HD1 420 aa12.42□□□□□ -0.42
PRPF39-202ENST00000424478 REXO5Q96IC2 774 aaKnown RBP12.42□□□□□ -0.42
PRPF39-202ENST00000424478 WFDC6Q9BQY6 131 aa12.42□□□□□ -0.42
PRPF39-202ENST00000424478 B3GNT4Q9C0J1 378 aa12.42□□□□□ -0.42
PRPF39-202ENST00000424478 CDCP1Q9H5V8 836 aa12.42□□□□□ -0.42
PRPF39-202ENST00000424478 MAP3K8P41279 467 aa12.41□□□□□ -0.42
PRPF39-202ENST00000424478 MRPS22P82650 360 aaKnown RBP12.41□□□□□ -0.42
PRPF39-202ENST00000424478 FADDQ13158 208 aa12.41□□□□□ -0.42
PRPF39-202ENST00000424478 FLOT2Q14254 428 aa12.41□□□□□ -0.42
PRPF39-202ENST00000424478 TRIM25Q14258 630 aaKnown RBP12.41□□□□□ -0.42
PRPF39-202ENST00000424478 BICRALQ6AI39 1079 aa12.41□□□□□ -0.42
PRPF39-202ENST00000424478 VTCN1Q7Z7D3 282 aa12.41□□□□□ -0.42
PRPF39-202ENST00000424478 SPACA3Q8IXA5 215 aa12.41□□□□□ -0.42
PRPF39-202ENST00000424478 LGI4Q8N135 537 aa12.41□□□□□ -0.42
PRPF39-202ENST00000424478 BCORP1Q8N888 145 aa12.41□□□□□ -0.42
PRPF39-202ENST00000424478 ZNF248Q8NDW4 579 aa12.41□□□□□ -0.42
PRPF39-202ENST00000424478 ELP5Q8TE02 316 aa12.41□□□□□ -0.42
PRPF39-202ENST00000424478 GATA6Q92908 595 aa12.41□□□□□ -0.42
PRPF39-202ENST00000424478 MOAP1Q96BY2 351 aa12.41□□□□□ -0.42
PRPF39-202ENST00000424478 SDF2Q99470 211 aa12.41□□□□□ -0.42
PRPF39-202ENST00000424478 SEMA4CQ9C0C4 833 aa12.41□□□□□ -0.42
PRPF39-202ENST00000424478 PIGUQ9H490 435 aa12.41□□□□□ -0.42
PRPF39-202ENST00000424478 RLIMQ9NVW2 624 aa12.41□□□□□ -0.42
PRPF39-202ENST00000424478 KCNE5Q9UJ90 142 aa12.41□□□□□ -0.42
PRPF39-202ENST00000424478 ANGPTL2Q9UKU9 493 aa12.41□□□□□ -0.42
PRPF39-202ENST00000424478 PCNX3Q9H6A9 2034 aa12.41□□□□□ -0.42
PRPF39-202ENST00000424478 FAM220BPB1ANY3 271 aa12.41□□□□□ -0.42
PRPF39-202ENST00000424478 ACOT8O14734 319 aa12.41□□□□□ -0.42
PRPF39-202ENST00000424478 FRS3O43559 492 aa12.41□□□□□ -0.42
PRPF39-202ENST00000424478 BCAS1O75363 584 aaPredicted RBP12.41□□□□□ -0.42
PRPF39-202ENST00000424478 ZNF682O95780 498 aa12.41□□□□□ -0.42
PRPF39-202ENST00000424478 ARAFP10398 606 aa12.41□□□□□ -0.42
PRPF39-202ENST00000424478 HSD17B1P14061 328 aa12.41□□□□□ -0.42
PRPF39-202ENST00000424478 PPIBP23284 216 aaKnown RBP12.41□□□□□ -0.42
PRPF39-202ENST00000424478 GALNSP34059 522 aa12.41□□□□□ -0.42
PRPF39-202ENST00000424478 ZNHIT3Q15649 155 aaPredicted RBP12.41□□□□□ -0.42
PRPF39-202ENST00000424478 MAPK14Q16539 360 aa12.41□□□□□ -0.42
PRPF39-202ENST00000424478 NDUFAF6Q330K2 333 aa12.41□□□□□ -0.42
PRPF39-202ENST00000424478 PLAG1Q6DJT9 500 aa12.41□□□□□ -0.42
PRPF39-202ENST00000424478 ENPP6Q6UWR7 440 aa12.41□□□□□ -0.42
PRPF39-202ENST00000424478 LINC00696Q6ZRV3 163 aa12.41□□□□□ -0.42
PRPF39-202ENST00000424478 C11orf65Q8NCR3 313 aa12.41□□□□□ -0.42
PRPF39-202ENST00000424478 OR7G1Q8NGA0 311 aa12.41□□□□□ -0.42
PRPF39-202ENST00000424478 FAM162AQ96A26 154 aa12.41□□□□□ -0.42
PRPF39-202ENST00000424478 COL21A1Q96P44 957 aa12.41□□□□□ -0.42
PRPF39-202ENST00000424478 P2RX2Q9UBL9 471 aa12.41□□□□□ -0.42
PRPF39-202ENST00000424478 C5orf58C9J3I9 102 aa12.4□□□□□ -0.42
PRPF39-202ENST00000424478 M0QX08 132 aa12.4□□□□□ -0.42
PRPF39-202ENST00000424478 TPST1O60507 370 aa12.4□□□□□ -0.42
PRPF39-202ENST00000424478 REM1O75628 298 aa12.4□□□□□ -0.42
PRPF39-202ENST00000424478 NKX2-2O95096 273 aa12.4□□□□□ -0.42
PRPF39-202ENST00000424478 PGM3O95394 542 aa12.4□□□□□ -0.42
PRPF39-202ENST00000424478 SERPINA1P01009 418 aa12.4□□□□□ -0.42
PRPF39-202ENST00000424478 ABCD3P28288 659 aa12.4□□□□□ -0.42
PRPF39-202ENST00000424478 FBXW4P57775 412 aa12.4□□□□□ -0.42
PRPF39-202ENST00000424478 POU6F2P78424 691 aaPredicted RBP12.4□□□□□ -0.42
PRPF39-202ENST00000424478 DMTNQ08495 405 aa12.4□□□□□ -0.42
PRPF39-202ENST00000424478 SPATA24Q86W54 205 aa12.4□□□□□ -0.42
PRPF39-202ENST00000424478 VRK2Q86Y07 508 aa12.4□□□□□ -0.42
PRPF39-202ENST00000424478 RAB43Q86YS6 212 aa12.4□□□□□ -0.42
PRPF39-202ENST00000424478 OR4C3Q8NH37 302 aa12.4□□□□□ -0.42
PRPF39-202ENST00000424478 SLC39A7Q92504 469 aa12.4□□□□□ -0.42
PRPF39-202ENST00000424478 TPD52L3Q96J77 140 aa12.4□□□□□ -0.42
PRPF39-202ENST00000424478 LCORQ96JN0 433 aaPredicted RBP12.4□□□□□ -0.42
PRPF39-202ENST00000424478 SLC38A1Q9H2H9 487 aa12.4□□□□□ -0.42
PRPF39-202ENST00000424478 CBLCQ9ULV8 474 aa12.4□□□□□ -0.42
PRPF39-202ENST00000424478 PKD1L2Q7Z442 2459 aa12.4□□□□□ -0.42
PRPF39-202ENST00000424478 TNRC6AQ8NDV7 1962 aaKnown RBP12.4□□□□□ -0.42
PRPF39-202ENST00000424478 G3V3Y1 287 aa12.4□□□□□ -0.42
PRPF39-202ENST00000424478 ITGA10O75578 1167 aa12.4□□□□□ -0.42
PRPF39-202ENST00000424478 GGT1P19440 569 aa12.4□□□□□ -0.42
PRPF39-202ENST00000424478 CCNIQ14094 377 aa12.4□□□□□ -0.42
PRPF39-202ENST00000424478 CCNL2Q96S94 520 aaPredicted RBP12.4□□□□□ -0.42
PRPF39-202ENST00000424478 SEPHS2Q99611 448 aa12.4□□□□□ -0.42
PRPF39-202ENST00000424478 LMF2Q9BU23 707 aaKnown RBP12.4□□□□□ -0.42
PRPF39-202ENST00000424478 PRR14Q9BWN1 585 aa12.4□□□□□ -0.42
PRPF39-202ENST00000424478 RTN4RQ9BZR6 473 aa12.4□□□□□ -0.42
PRPF39-202ENST00000424478 Q9N2J8 555 aa12.4□□□□□ -0.42
PRPF39-202ENST00000424478 MYOTQ9UBF9 498 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms