RNA–Protein interactions for RNA: ENST00000413806.7

SMARCA4-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-202ENST00000413806 ALDH16A1Q8IZ83 802 aa13.03□□□□□ -0.32
SMARCA4-202ENST00000413806 TMEM185AQ8NFB2 350 aa13.03□□□□□ -0.32
SMARCA4-202ENST00000413806 ISG20Q96AZ6 181 aaKnown RBP13.03□□□□□ -0.32
SMARCA4-202ENST00000413806 TMEM41AQ96HV5 264 aa13.03□□□□□ -0.32
SMARCA4-202ENST00000413806 OR4K3Q96R72 315 aa13.03□□□□□ -0.32
SMARCA4-202ENST00000413806 CACNG6Q9BXT2 260 aa13.03□□□□□ -0.32
SMARCA4-202ENST00000413806 ACTRT3Q9BYD9 372 aa13.03□□□□□ -0.32
SMARCA4-202ENST00000413806 PITHD1Q9GZP4 211 aaPredicted RBP13.03□□□□□ -0.32
SMARCA4-202ENST00000413806 MTHFD2LQ9H903 347 aaPredicted RBP13.03□□□□□ -0.32
SMARCA4-202ENST00000413806 RAB19A4D1S5 217 aa13.03□□□□□ -0.32
SMARCA4-202ENST00000413806 MEIS3P2A8K0S8 358 aa13.03□□□□□ -0.32
SMARCA4-202ENST00000413806 SULT1B1O43704 296 aa13.03□□□□□ -0.32
SMARCA4-202ENST00000413806 ADRB3P13945 408 aa13.03□□□□□ -0.32
SMARCA4-202ENST00000413806 RBMXP38159 391 aaKnown RBP13.03□□□□□ -0.32
SMARCA4-202ENST00000413806 FRKP42685 505 aaPredicted RBP13.03□□□□□ -0.32
SMARCA4-202ENST00000413806 CSNK1DP48730 415 aa13.03□□□□□ -0.32
SMARCA4-202ENST00000413806 CAMLGP49069 296 aa13.03□□□□□ -0.32
SMARCA4-202ENST00000413806 AGAP6Q5VW22 663 aa13.03□□□□□ -0.32
SMARCA4-202ENST00000413806 LCTLQ6UWM7 567 aa13.03□□□□□ -0.32
SMARCA4-202ENST00000413806 KLBQ86Z14 1044 aa13.03□□□□□ -0.32
SMARCA4-202ENST00000413806 TEX26Q8N6G2 289 aa13.03□□□□□ -0.32
SMARCA4-202ENST00000413806 SIMC1Q8NDZ2 872 aa13.03□□□□□ -0.32
SMARCA4-202ENST00000413806 AGAP4Q96P64 663 aa13.03□□□□□ -0.32
SMARCA4-202ENST00000413806 POT1Q9NUX5 634 aa13.03□□□□□ -0.32
SMARCA4-202ENST00000413806 ALKBH4Q9NXW9 302 aa13.03□□□□□ -0.32
SMARCA4-202ENST00000413806 ENPP5Q9UJA9 477 aa13.03□□□□□ -0.32
SMARCA4-202ENST00000413806 HSPA12AO43301 675 aa13.03□□□□□ -0.32
SMARCA4-202ENST00000413806 AQP9O43315 295 aa13.03□□□□□ -0.32
SMARCA4-202ENST00000413806 MITFO75030 526 aaPredicted RBP13.03□□□□□ -0.32
SMARCA4-202ENST00000413806 BPNT1O95861 308 aa13.03□□□□□ -0.32
SMARCA4-202ENST00000413806 TFP02787 698 aa13.03□□□□□ -0.32
SMARCA4-202ENST00000413806 EDN1P05305 212 aa13.03□□□□□ -0.32
SMARCA4-202ENST00000413806 MTNR1AP48039 350 aa13.03□□□□□ -0.32
SMARCA4-202ENST00000413806 GRIN2CQ14957 1233 aa13.03□□□□□ -0.32
SMARCA4-202ENST00000413806 CST6Q15828 149 aa13.03□□□□□ -0.32
SMARCA4-202ENST00000413806 RNF111Q6ZNA4 994 aa13.03□□□□□ -0.32
SMARCA4-202ENST00000413806 GPAT4Q86UL3 456 aa13.03□□□□□ -0.32
SMARCA4-202ENST00000413806 ADGRG5Q8IZF4 528 aa13.03□□□□□ -0.32
SMARCA4-202ENST00000413806 MDGA1Q8NFP4 955 aa13.03□□□□□ -0.32
SMARCA4-202ENST00000413806 PTCHD1Q96NR3 888 aa13.03□□□□□ -0.32
SMARCA4-202ENST00000413806 TP53I11O14683 189 aa13.03□□□□□ -0.32
SMARCA4-202ENST00000413806 TGM5O43548 720 aa13.03□□□□□ -0.32
SMARCA4-202ENST00000413806 HCRTR2O43614 444 aa13.03□□□□□ -0.32
SMARCA4-202ENST00000413806 IFNA1P01562 189 aa13.03□□□□□ -0.32
SMARCA4-202ENST00000413806 PGCP20142 388 aa13.03□□□□□ -0.32
SMARCA4-202ENST00000413806 MECP2P51608 486 aaKnown RBP13.03□□□□□ -0.32
SMARCA4-202ENST00000413806 FOXA1P55317 472 aa13.03□□□□□ -0.32
SMARCA4-202ENST00000413806 SPIN3Q5JUX0 258 aa13.03□□□□□ -0.32
SMARCA4-202ENST00000413806 KLHDC8AQ8IYD2 350 aa13.03□□□□□ -0.32
SMARCA4-202ENST00000413806 OR51A7Q8NH64 312 aa13.03□□□□□ -0.32
SMARCA4-202ENST00000413806 TBC1D15Q8TC07 691 aa13.03□□□□□ -0.32
SMARCA4-202ENST00000413806 NECAB3Q96P71 396 aaPredicted RBP13.03□□□□□ -0.32
SMARCA4-202ENST00000413806 NEDD4LQ96PU5 975 aa13.03□□□□□ -0.32
SMARCA4-202ENST00000413806 MRPL15Q9P015 296 aaKnown RBP13.03□□□□□ -0.32
SMARCA4-202ENST00000413806 A0A1W2PPL8 197 aa13.02□□□□□ -0.32
SMARCA4-202ENST00000413806 TCRBV21S2A2A0A5A6 115 aa13.02□□□□□ -0.32
SMARCA4-202ENST00000413806 SNAPINO95295 136 aa13.02□□□□□ -0.32
SMARCA4-202ENST00000413806 H2BFMP0C1H6 154 aa13.02□□□□□ -0.32
SMARCA4-202ENST00000413806 ITGAMP11215 1152 aa13.02□□□□□ -0.32
SMARCA4-202ENST00000413806 AK4P27144 223 aaPredicted RBP13.02□□□□□ -0.32
SMARCA4-202ENST00000413806 TRIM23P36406 574 aa13.02□□□□□ -0.32
SMARCA4-202ENST00000413806 CDK5R2Q13319 367 aa13.02□□□□□ -0.32
SMARCA4-202ENST00000413806 OR4K5Q8NGD3 323 aa13.02□□□□□ -0.32
SMARCA4-202ENST00000413806 DAZLQ92904 295 aaKnown RBP13.02□□□□□ -0.32
SMARCA4-202ENST00000413806 PCDHGA8Q9Y5G5 932 aa13.02□□□□□ -0.32
SMARCA4-202ENST00000413806 A0A0G2JMP0 313 aa13.02□□□□□ -0.32
SMARCA4-202ENST00000413806 E9PI62 339 aa13.02□□□□□ -0.32
SMARCA4-202ENST00000413806 ARPC5O15511 151 aa13.02□□□□□ -0.32
SMARCA4-202ENST00000413806 OR4M2Q8NGB6 313 aa13.02□□□□□ -0.32
SMARCA4-202ENST00000413806 OR5M3Q8NGP4 307 aa13.02□□□□□ -0.32
SMARCA4-202ENST00000413806 ELP5Q8TE02 316 aa13.02□□□□□ -0.32
SMARCA4-202ENST00000413806 LURAP1Q96LR2 239 aa13.02□□□□□ -0.32
SMARCA4-202ENST00000413806 TTTY10Q9BZA0 68 aa13.02□□□□□ -0.32
SMARCA4-202ENST00000413806 MYNNQ9NPC7 610 aa13.02□□□□□ -0.32
SMARCA4-202ENST00000413806 GPR45Q9Y5Y3 372 aa13.02□□□□□ -0.32
SMARCA4-202ENST00000413806 MEIOCA2RUB1 952 aa13.02□□□□□ -0.33
SMARCA4-202ENST00000413806 TRAPPC13A5PLN9 417 aa13.02□□□□□ -0.33
SMARCA4-202ENST00000413806 TSPAN15O95858 294 aa13.02□□□□□ -0.33
SMARCA4-202ENST00000413806 SOX2P48431 317 aa13.02□□□□□ -0.33
SMARCA4-202ENST00000413806 PRKXP51817 358 aa13.02□□□□□ -0.33
SMARCA4-202ENST00000413806 PLCXD2Q0VAA5 305 aa13.02□□□□□ -0.33
SMARCA4-202ENST00000413806 SFRP4Q6FHJ7 346 aaPredicted RBP13.02□□□□□ -0.33
SMARCA4-202ENST00000413806 P4HA3Q7Z4N8 544 aa13.02□□□□□ -0.33
SMARCA4-202ENST00000413806 CCDC71Q8IV32 467 aaPredicted RBP13.02□□□□□ -0.33
SMARCA4-202ENST00000413806 Q8N9G6 341 aaPredicted RBP13.02□□□□□ -0.33
SMARCA4-202ENST00000413806 FRS2Q8WU20 508 aa13.02□□□□□ -0.33
SMARCA4-202ENST00000413806 CNOT9Q92600 299 aaKnown RBP13.02□□□□□ -0.33
SMARCA4-202ENST00000413806 TFAP2CQ92754 450 aa13.02□□□□□ -0.33
SMARCA4-202ENST00000413806 TESCQ96BS2 214 aa13.02□□□□□ -0.33
SMARCA4-202ENST00000413806 ZNF416Q9BWM5 594 aa13.02□□□□□ -0.33
SMARCA4-202ENST00000413806 PDE7BQ9NP56 450 aa13.02□□□□□ -0.33
SMARCA4-202ENST00000413806 ZNF226Q9NYT6 803 aa13.02□□□□□ -0.33
SMARCA4-202ENST00000413806 CD8B2A6NJW9 211 aa13.02□□□□□ -0.33
SMARCA4-202ENST00000413806 CTSAP10619 480 aa13.02□□□□□ -0.33
SMARCA4-202ENST00000413806 CD8BP10966 210 aa13.02□□□□□ -0.33
SMARCA4-202ENST00000413806 FBLP22087 321 aaKnown RBP13.02□□□□□ -0.33
SMARCA4-202ENST00000413806 CNR2P34972 360 aa13.02□□□□□ -0.33
SMARCA4-202ENST00000413806 CAPZA1P52907 286 aa13.02□□□□□ -0.33
SMARCA4-202ENST00000413806 CRYZQ08257 329 aaKnown RBP13.02□□□□□ -0.33
SMARCA4-202ENST00000413806 ZNF584Q8IVC4 421 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms