RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 GSTM5P46439 218 aa15.21■□□□□ 0.03
PDLIM7-201ENST00000355572 AGFG1P52594 562 aaKnown RBP15.21■□□□□ 0.03
PDLIM7-201ENST00000355572 ZNF136P52737 540 aa15.21■□□□□ 0.03
PDLIM7-201ENST00000355572 GAB1Q13480 694 aa15.21■□□□□ 0.03
PDLIM7-201ENST00000355572 ERCC6LQ2NKX8 1250 aa15.21■□□□□ 0.03
PDLIM7-201ENST00000355572 SH2D4BQ5SQS7 431 aa15.21■□□□□ 0.03
PDLIM7-201ENST00000355572 LARP4Q71RC2 724 aaKnown RBP eCLIP15.21■□□□□ 0.03
PDLIM7-201ENST00000355572 OR2L13Q8N349 312 aa15.21■□□□□ 0.03
PDLIM7-201ENST00000355572 FAM76AQ8TAV0 307 aa15.21■□□□□ 0.03
PDLIM7-201ENST00000355572 TWIST2Q8WVJ9 160 aa15.21■□□□□ 0.03
PDLIM7-201ENST00000355572 ERP27Q96DN0 273 aa15.21■□□□□ 0.03
PDLIM7-201ENST00000355572 ELP4Q96EB1 424 aa15.21■□□□□ 0.03
PDLIM7-201ENST00000355572 C14orf79Q96F83 325 aa15.21■□□□□ 0.03
PDLIM7-201ENST00000355572 ZNF395Q9H8N7 513 aaPredicted RBP15.21■□□□□ 0.03
PDLIM7-201ENST00000355572 RYDENQ9NUL5 291 aaKnown RBP15.21■□□□□ 0.03
PDLIM7-201ENST00000355572 GIMAP4Q9NUV9 329 aa15.21■□□□□ 0.03
PDLIM7-201ENST00000355572 C1orf109Q9NX04 203 aa15.21■□□□□ 0.03
PDLIM7-201ENST00000355572 CAMK2AQ9UQM7 478 aa15.21■□□□□ 0.03
PDLIM7-201ENST00000355572 WIF1Q9Y5W5 379 aa15.21■□□□□ 0.03
PDLIM7-201ENST00000355572 MPDZO75970 2070 aa15.2■□□□□ 0.02
PDLIM7-201ENST00000355572 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.2■□□□□ 0.02
PDLIM7-201ENST00000355572 SCO2O43819 266 aa15.2■□□□□ 0.02
PDLIM7-201ENST00000355572 ZIC3O60481 467 aa15.2■□□□□ 0.02
PDLIM7-201ENST00000355572 BCAS2O75934 225 aaPredicted RBP15.2■□□□□ 0.02
PDLIM7-201ENST00000355572 HOXD4P09016 255 aaPredicted RBP15.2■□□□□ 0.02
PDLIM7-201ENST00000355572 GABRA1P14867 456 aa15.2■□□□□ 0.02
PDLIM7-201ENST00000355572 POU3F2P20265 443 aaPredicted RBP15.2■□□□□ 0.02
PDLIM7-201ENST00000355572 MPIP34949 423 aa15.2■□□□□ 0.02
PDLIM7-201ENST00000355572 ETV4P43268 484 aa15.2■□□□□ 0.02
PDLIM7-201ENST00000355572 GFRA1P56159 465 aa15.2■□□□□ 0.02
PDLIM7-201ENST00000355572 B3GALT5-AS1P59052 145 aa15.2■□□□□ 0.02
PDLIM7-201ENST00000355572 NAA20P61599 178 aa15.2■□□□□ 0.02
PDLIM7-201ENST00000355572 HSPB3Q12988 150 aa15.2■□□□□ 0.02
PDLIM7-201ENST00000355572 PDE7AQ13946 482 aa15.2■□□□□ 0.02
PDLIM7-201ENST00000355572 GALNTL6Q49A17 601 aa15.2■□□□□ 0.02
PDLIM7-201ENST00000355572 WDR93Q6P2C0 686 aa15.2■□□□□ 0.02
PDLIM7-201ENST00000355572 RNF165Q6ZSG1 346 aa15.2■□□□□ 0.02
PDLIM7-201ENST00000355572 ZAR1Q86SH2 424 aa15.2■□□□□ 0.02
PDLIM7-201ENST00000355572 RIBC1Q8N443 379 aaPredicted RBP15.2■□□□□ 0.02
PDLIM7-201ENST00000355572 C9orf106Q8NAJ2 232 aa15.2■□□□□ 0.02
PDLIM7-201ENST00000355572 NRGNQ92686 78 aa15.2■□□□□ 0.02
PDLIM7-201ENST00000355572 CAVIN3Q969G5 261 aa15.2■□□□□ 0.02
PDLIM7-201ENST00000355572 ABTB1Q969K4 478 aaPredicted RBP15.2■□□□□ 0.02
PDLIM7-201ENST00000355572 GIMAP5Q96F15 307 aa15.2■□□□□ 0.02
PDLIM7-201ENST00000355572 PKNOX2Q96KN3 472 aa15.2■□□□□ 0.02
PDLIM7-201ENST00000355572 KLHDC3Q9BQ90 382 aa15.2■□□□□ 0.02
PDLIM7-201ENST00000355572 ZDHHC2Q9UIJ5 367 aa15.2■□□□□ 0.02
PDLIM7-201ENST00000355572 TRAF6Q9Y4K3 522 aa15.2■□□□□ 0.02
PDLIM7-201ENST00000355572 PCDHGB3Q9Y5G1 929 aa15.2■□□□□ 0.02
PDLIM7-201ENST00000355572 OTOGQ6ZRI0 2925 aa15.19■□□□□ 0.02
PDLIM7-201ENST00000355572 H3BQF6 201 aa15.19■□□□□ 0.02
PDLIM7-201ENST00000355572 SLC28A1O00337 649 aa15.19■□□□□ 0.02
PDLIM7-201ENST00000355572 ITM2AO43736 263 aa15.19■□□□□ 0.02
PDLIM7-201ENST00000355572 FADS1O60427 444 aa15.19■□□□□ 0.02
PDLIM7-201ENST00000355572 NPHS1O60500 1241 aa15.19■□□□□ 0.02
PDLIM7-201ENST00000355572 LYPLA1O75608 230 aaPredicted RBP15.19■□□□□ 0.02
PDLIM7-201ENST00000355572 FGF4P08620 206 aa15.19■□□□□ 0.02
PDLIM7-201ENST00000355572 GRK2P25098 689 aa15.19■□□□□ 0.02
PDLIM7-201ENST00000355572 ELAVL4P26378 380 aaKnown RBP15.19■□□□□ 0.02
PDLIM7-201ENST00000355572 MAP3K8P41279 467 aa15.19■□□□□ 0.02
PDLIM7-201ENST00000355572 FRKP42685 505 aaPredicted RBP15.19■□□□□ 0.02
PDLIM7-201ENST00000355572 PNLIPRP2P54317 469 aa15.19■□□□□ 0.02
PDLIM7-201ENST00000355572 RPP38P78345 283 aaKnown RBP15.19■□□□□ 0.02
PDLIM7-201ENST00000355572 FOXF2Q12947 444 aa15.19■□□□□ 0.02
PDLIM7-201ENST00000355572 SNTA1Q13424 505 aa15.19■□□□□ 0.02
PDLIM7-201ENST00000355572 XKR7Q5GH72 579 aa15.19■□□□□ 0.02
PDLIM7-201ENST00000355572 APOOLQ6UXV4 268 aa15.19■□□□□ 0.02
PDLIM7-201ENST00000355572 GALNT10Q86SR1 603 aa15.19■□□□□ 0.02
PDLIM7-201ENST00000355572 PLCZ1Q86YW0 608 aa15.19■□□□□ 0.02
PDLIM7-201ENST00000355572 TRIM42Q8IWZ5 723 aa15.19■□□□□ 0.02
PDLIM7-201ENST00000355572 SAMD14Q8IZD0 417 aaPredicted RBP15.19■□□□□ 0.02
PDLIM7-201ENST00000355572 FBXO30Q8TB52 745 aa15.19■□□□□ 0.02
PDLIM7-201ENST00000355572 PIK3R3Q92569 461 aa15.19■□□□□ 0.02
PDLIM7-201ENST00000355572 OTUB1Q96FW1 271 aaPredicted RBP15.19■□□□□ 0.02
PDLIM7-201ENST00000355572 TRIB1Q96RU8 372 aa15.19■□□□□ 0.02
PDLIM7-201ENST00000355572 CCT7Q99832 543 aa15.19■□□□□ 0.02
PDLIM7-201ENST00000355572 SH3GL2Q99962 352 aa15.19■□□□□ 0.02
PDLIM7-201ENST00000355572 TUBA1CQ9BQE3 449 aa15.19■□□□□ 0.02
PDLIM7-201ENST00000355572 LMF2Q9BU23 707 aaKnown RBP15.19■□□□□ 0.02
PDLIM7-201ENST00000355572 EQTNQ9NQ60 294 aa15.19■□□□□ 0.02
PDLIM7-201ENST00000355572 SIRT3Q9NTG7 399 aaPredicted RBP15.19■□□□□ 0.02
PDLIM7-201ENST00000355572 TAS2R9Q9NYW1 312 aa15.19■□□□□ 0.02
PDLIM7-201ENST00000355572 SENP1Q9P0U3 644 aa15.19■□□□□ 0.02
PDLIM7-201ENST00000355572 L3MBTL1Q9Y468 752 aa15.19■□□□□ 0.02
PDLIM7-201ENST00000355572 AHRRA9YTQ3 701 aa15.18■□□□□ 0.02
PDLIM7-201ENST00000355572 PDPK1O15530 556 aa15.18■□□□□ 0.02
PDLIM7-201ENST00000355572 SLU7O95391 586 aaKnown RBP15.18■□□□□ 0.02
PDLIM7-201ENST00000355572 ACP2P11117 423 aa15.18■□□□□ 0.02
PDLIM7-201ENST00000355572 BCKDHAP12694 445 aa15.18■□□□□ 0.02
PDLIM7-201ENST00000355572 IL12BP29460 328 aa15.18■□□□□ 0.02
PDLIM7-201ENST00000355572 SSTR2P30874 369 aa15.18■□□□□ 0.02
PDLIM7-201ENST00000355572 NTSP30990 170 aa15.18■□□□□ 0.02
PDLIM7-201ENST00000355572 LHX2P50458 406 aa15.18■□□□□ 0.02
PDLIM7-201ENST00000355572 CLDN15P56746 228 aa15.18■□□□□ 0.02
PDLIM7-201ENST00000355572 SRYQ05066 204 aa15.18■□□□□ 0.02
PDLIM7-201ENST00000355572 ZNF844Q08AG5 666 aa15.18■□□□□ 0.02
PDLIM7-201ENST00000355572 NSUN5P2Q63ZY6 315 aa15.18■□□□□ 0.02
PDLIM7-201ENST00000355572 IKBIPQ70UQ0 350 aa15.18■□□□□ 0.02
PDLIM7-201ENST00000355572 EXOC3L1Q86VI1 746 aa15.18■□□□□ 0.02
PDLIM7-201ENST00000355572 DDIASQ8IXT1 998 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms