RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 FANK1Q8TC84 345 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 HSD17B8Q92506 261 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 HGDQ93099 445 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 SLC12A9Q9BXP2 914 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 TEX12Q9BXU0 123 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 RRAGCQ9HB90 399 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 GKN1Q9NS71 199 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 TESQ9UGI8 421 aaKnown RBP7.19□□□□□ -1.26
BRCA1-201ENST00000352993 SLC13A4Q9UKG4 626 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 STON1Q9Y6Q2 735 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 AP1M2Q9Y6Q5 423 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 SLC9B1P1A6NJY1 282 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 OR2AG2A6NM03 316 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 LRRN3E7EW58 273 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 ANHXE9PGG2 379 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 CASC3O15234 703 aaKnown RBP7.19□□□□□ -1.26
BRCA1-201ENST00000352993 PTP4A3O75365 173 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 CLDN11O75508 207 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 KHDRBS3O75525 346 aaKnown RBP7.19□□□□□ -1.26
BRCA1-201ENST00000352993 RGS9O75916 674 aaPredicted RBP7.19□□□□□ -1.26
BRCA1-201ENST00000352993 NMBP08949 121 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 NR2F1P10589 423 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 PRPH2P23942 346 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 MAOBP27338 520 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 RBMS1P29558 406 aaKnown RBP7.19□□□□□ -1.26
BRCA1-201ENST00000352993 PBLDP30039 288 aaPredicted RBP7.19□□□□□ -1.26
BRCA1-201ENST00000352993 BTCP35070 178 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 HNF1BP35680 557 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 SLC6A11P48066 632 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 PRKAG1P54619 331 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 MEF2AQ02078 507 aaPredicted RBP7.19□□□□□ -1.26
BRCA1-201ENST00000352993 CTXN3Q4LDR2 81 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 SYTL3Q4VX76 610 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 LIPJQ5W064 366 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 HBMQ6B0K9 141 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 SLC30A6Q6NXT4 461 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 MACC1Q6ZN28 852 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 CEACAM19Q7Z692 300 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 FGD2Q7Z6J4 655 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 ZER1Q7Z7L7 766 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 RELL2Q8NC24 303 aaPredicted RBP7.19□□□□□ -1.26
BRCA1-201ENST00000352993 OR56B4Q8NH76 319 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 SLC38A5Q8WUX1 472 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 PLA2G12AQ9BZM1 189 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 BHLHE41Q9C0J9 482 aaPredicted RBP7.19□□□□□ -1.26
BRCA1-201ENST00000352993 LRRN3Q9H3W5 708 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 MTG2Q9H4K7 406 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 TAS2R3Q9NYW6 316 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 CNIH4Q9P003 139 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 RNF181Q9P0P0 153 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 CEP350Q5VT06 3117 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 A0A0G2JLL6 359 aaPredicted RBP7.19□□□□□ -1.26
BRCA1-201ENST00000352993 OR6C74A6NCV1 312 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 LINC01387J3KSC0 135 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 PIP5K1CO60331 668 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 PEX14O75381 377 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 SOX30O94993 753 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 ZNF8P17098 575 aaPredicted RBP7.19□□□□□ -1.26
BRCA1-201ENST00000352993 CXCL2P19875 107 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 SGSHP51688 502 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 RAE1P78406 368 aaKnown RBP7.19□□□□□ -1.26
BRCA1-201ENST00000352993 NHLRC3Q5JS37 347 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 SPOUT1Q5T280 376 aaKnown RBP7.19□□□□□ -1.26
BRCA1-201ENST00000352993 MPP7Q5T2T1 576 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 COL13A1Q5TAT6 717 aaPredicted RBP7.19□□□□□ -1.26
BRCA1-201ENST00000352993 LYPLAL1Q5VWZ2 237 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 OR5M10Q6IEU7 315 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 TMEM88Q6PEY1 159 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 SERPINA13PQ6UXR4 307 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 Q6ZTK2 550 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 PRRT2Q7Z6L0 340 aaPredicted RBP7.19□□□□□ -1.26
BRCA1-201ENST00000352993 OAFQ86UD1 273 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 MMP21Q8N119 569 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 GPC2Q8N158 579 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 HORMAD2Q8N7B1 307 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 GPR26Q8NDV2 337 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 OR10H4Q8NGA5 316 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 WDR48Q8TAF3 677 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 KAT2AQ92830 837 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 ATOH1Q92858 354 aaPredicted RBP7.19□□□□□ -1.26
BRCA1-201ENST00000352993 ZNF607Q96SK3 696 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 DPH7Q9BTV6 452 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 CFHR5Q9BXR6 569 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 REG4Q9BYZ8 158 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 BTBD1Q9H0C5 482 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 C20orf85Q9H1P6 137 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 TMEM38AQ9H6F2 299 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 ELAC1Q9H777 363 aaKnown RBP7.19□□□□□ -1.26
BRCA1-201ENST00000352993 WDR26Q9H7D7 661 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 DDX31Q9H8H2 851 aaKnown RBP7.19□□□□□ -1.26
BRCA1-201ENST00000352993 MED11Q9P086 117 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 GPR160Q9UJ42 338 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 CSNK1G3Q9Y6M4 447 aa7.19□□□□□ -1.26
BRCA1-201ENST00000352993 DSPPQ9NZW4 1301 aa7.18□□□□□ -1.26
BRCA1-201ENST00000352993 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.18□□□□□ -1.26
BRCA1-201ENST00000352993 MBLAC1A4D2B0 266 aaPredicted RBP7.18□□□□□ -1.26
BRCA1-201ENST00000352993 TRABD2BA6NFA1 517 aa7.18□□□□□ -1.26
BRCA1-201ENST00000352993 OR6C75A6NL08 312 aa7.18□□□□□ -1.26
BRCA1-201ENST00000352993 FAM183AA6NL82 134 aa7.18□□□□□ -1.26
BRCA1-201ENST00000352993 GPR37L1O60883 481 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms