RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 PDCD11Q14690 1871 aaKnown RBP7.75□□□□□ -1.17
HPS4-201ENST00000336873 SLC5A10A0PJK1 596 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 OR2A25A4D2G3 310 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 LRRN3E7EW58 273 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 TEX46H3BTG2 121 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 M0R082 166 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 HPGDSO60760 199 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 SLITRK5O94991 958 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 FBXO45P0C2W1 286 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 MMP11P24347 488 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 LRIT3Q3SXY7 679 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 MPP7Q5T2T1 576 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 LAIR2Q6ISS4 152 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 RPTNQ6XPR3 784 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 PDZD3Q86UT5 571 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 LYSMD2Q8IV50 215 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 CPXM2Q8N436 756 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 ZNF557Q8N988 423 aaPredicted RBP7.75□□□□□ -1.17
HPS4-201ENST00000336873 FATE1Q969F0 183 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 TM4SF18Q96CE8 201 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 PTCHD1Q96NR3 888 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 RAD9AQ99638 391 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 TPSD1Q9BZJ3 242 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 ZDHHC5Q9C0B5 715 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 SAP130Q9H0E3 1048 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 ZBP1Q9H171 429 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 LRRN3Q9H3W5 708 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 RANGRFQ9HD47 186 aaPredicted RBP7.75□□□□□ -1.17
HPS4-201ENST00000336873 GPATCH2Q9NW75 528 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 CLDND1Q9NY35 253 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 ZNF226Q9NYT6 803 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 SLC7A7Q9UM01 511 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 ICE1Q9Y2F5 2266 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 ABCA7Q8IZY2 2146 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 ARHGEF17Q96PE2 2063 aaPredicted RBP7.75□□□□□ -1.17
HPS4-201ENST00000336873 SCN10AQ9Y5Y9 1956 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 SCN4AP35499 1836 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 LOC105369274A0A096LPK9 316 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 SAGE2PA6NJ88 616 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 C12orf71A8MTZ7 269 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 KMOO15229 486 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 INHBBP09529 407 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 ZNF888P0CJ79 500 aaPredicted RBP7.75□□□□□ -1.17
HPS4-201ENST00000336873 CPMP14384 443 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 ACADLP28330 430 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 RPS27P42677 84 aaKnown RBP7.75□□□□□ -1.17
HPS4-201ENST00000336873 RPS25P62851 125 aaKnown RBP7.75□□□□□ -1.17
HPS4-201ENST00000336873 ZNF267Q14586 743 aaPredicted RBP7.75□□□□□ -1.17
HPS4-201ENST00000336873 ABI3BPQ7Z7G0 1075 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 ZNF547Q8IVP9 402 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 OR4N4Q8N0Y3 316 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 SYNPOQ8N3V7 929 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 ANKK1Q8NFD2 765 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 C7orf34Q96L11 122 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 TOX2Q96NM4 488 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 CAMK1GQ96NX5 476 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 MND1Q9BWT6 205 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 TMEM168Q9H0V1 697 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 C1GALT1Q9NS00 363 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 SPATA6Q9NWH7 488 aaPredicted RBP7.75□□□□□ -1.17
HPS4-201ENST00000336873 EXTL2Q9UBQ6 330 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 MAN2B2Q9Y2E5 1009 aa7.75□□□□□ -1.17
HPS4-201ENST00000336873 ARPC4-TTLL3A0A0A6YYG9 625 aa7.74□□□□□ -1.17
HPS4-201ENST00000336873 H3BQ06 376 aaPredicted RBP7.74□□□□□ -1.17
HPS4-201ENST00000336873 GTPBP1O00178 669 aaKnown RBP7.74□□□□□ -1.17
HPS4-201ENST00000336873 SOCS6O14544 535 aa7.74□□□□□ -1.17
HPS4-201ENST00000336873 EEF1E1O43324 174 aaKnown RBP7.74□□□□□ -1.17
HPS4-201ENST00000336873 PIP5K1CO60331 668 aa7.74□□□□□ -1.17
HPS4-201ENST00000336873 TIMP1P01033 207 aa7.74□□□□□ -1.17
HPS4-201ENST00000336873 ACSL1P33121 698 aa7.74□□□□□ -1.17
HPS4-201ENST00000336873 KHKP50053 298 aa7.74□□□□□ -1.17
HPS4-201ENST00000336873 CTBP2P56545 445 aa7.74□□□□□ -1.17
HPS4-201ENST00000336873 TAS2R38P59533 333 aa7.74□□□□□ -1.17
HPS4-201ENST00000336873 BIKQ13323 160 aa7.74□□□□□ -1.17
HPS4-201ENST00000336873 RUNX3Q13761 415 aa7.74□□□□□ -1.17
HPS4-201ENST00000336873 PUM1Q14671 1186 aaKnown RBP eCLIP7.74□□□□□ -1.17
HPS4-201ENST00000336873 SYT6Q5T7P8 510 aaPredicted RBP7.74□□□□□ -1.17
HPS4-201ENST00000336873 PNCKQ6P2M8 343 aa7.74□□□□□ -1.17
HPS4-201ENST00000336873 TMEM64Q6YI46 380 aa7.74□□□□□ -1.17
HPS4-201ENST00000336873 TECPR1Q7Z6L1 1165 aa7.74□□□□□ -1.17
HPS4-201ENST00000336873 FBXL6Q8N531 539 aa7.74□□□□□ -1.17
HPS4-201ENST00000336873 DYNC2LI1Q8TCX1 351 aa7.74□□□□□ -1.17
HPS4-201ENST00000336873 ZMYND19Q96E35 227 aaPredicted RBP7.74□□□□□ -1.17
HPS4-201ENST00000336873 MICU1Q9BPX6 476 aa7.74□□□□□ -1.17
HPS4-201ENST00000336873 SLC17A9Q9BYT1 436 aa7.74□□□□□ -1.17
HPS4-201ENST00000336873 MKRN2Q9H000 416 aaKnown RBP7.74□□□□□ -1.17
HPS4-201ENST00000336873 LMAN2LQ9H0V9 348 aa7.74□□□□□ -1.17
HPS4-201ENST00000336873 SRA1Q9HD15 236 aaKnown RBP7.74□□□□□ -1.17
HPS4-201ENST00000336873 PLSCR3Q9NRY6 295 aa7.74□□□□□ -1.17
HPS4-201ENST00000336873 QPCTLQ9NXS2 382 aa7.74□□□□□ -1.17
HPS4-201ENST00000336873 MSRAQ9UJ68 235 aa7.74□□□□□ -1.17
HPS4-201ENST00000336873 MAPRE3Q9UPY8 281 aa7.74□□□□□ -1.17
HPS4-201ENST00000336873 PCDHGA2Q9Y5H1 932 aa7.74□□□□□ -1.17
HPS4-201ENST00000336873 FAM172BPA6NC97 362 aa7.74□□□□□ -1.17
HPS4-201ENST00000336873 CHURC1-FNTBB4DL54 471 aa7.74□□□□□ -1.17
HPS4-201ENST00000336873 SLC16A5O15375 505 aa7.74□□□□□ -1.17
HPS4-201ENST00000336873 PROM1O43490 865 aa7.74□□□□□ -1.17
HPS4-201ENST00000336873 RLN1P04808 185 aa7.74□□□□□ -1.17
HPS4-201ENST00000336873 ITGAMP11215 1152 aa7.74□□□□□ -1.17
HPS4-201ENST00000336873 PRKACAP17612 351 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms