RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 SLCO4C1Q6ZQN7 724 aa11.94□□□□□ -0.5
RETREG3-201ENST00000309428 ZNF655Q8N720 491 aaPredicted RBP11.94□□□□□ -0.5
RETREG3-201ENST00000309428 OR8K3Q8NH51 312 aa11.94□□□□□ -0.5
RETREG3-201ENST00000309428 TSACCQ96A04 125 aaPredicted RBP11.94□□□□□ -0.5
RETREG3-201ENST00000309428 ST6GAL2Q96JF0 529 aa11.94□□□□□ -0.5
RETREG3-201ENST00000309428 OR6C2Q9NZP2 312 aa11.94□□□□□ -0.5
RETREG3-201ENST00000309428 PFDN2Q9UHV9 154 aa11.94□□□□□ -0.5
RETREG3-201ENST00000309428 NTNG1Q9Y2I2 539 aa11.94□□□□□ -0.5
RETREG3-201ENST00000309428 RWDD3Q9Y3V2 267 aa11.94□□□□□ -0.5
RETREG3-201ENST00000309428 PCDHGB2Q9Y5G2 931 aa11.94□□□□□ -0.5
RETREG3-201ENST00000309428 COL4A6Q14031 1691 aa11.94□□□□□ -0.5
RETREG3-201ENST00000309428 SCN4AP35499 1836 aa11.94□□□□□ -0.5
RETREG3-201ENST00000309428 TIMP1P01033 207 aa11.94□□□□□ -0.5
RETREG3-201ENST00000309428 IGHA2P01877 340 aa11.94□□□□□ -0.5
RETREG3-201ENST00000309428 PTX3P26022 381 aaPredicted RBP11.94□□□□□ -0.5
RETREG3-201ENST00000309428 MTNR1AP48039 350 aa11.94□□□□□ -0.5
RETREG3-201ENST00000309428 SLC6A12P48065 614 aa11.94□□□□□ -0.5
RETREG3-201ENST00000309428 WNT3P56703 355 aa11.94□□□□□ -0.5
RETREG3-201ENST00000309428 ZNF630Q2M218 657 aaPredicted RBP11.94□□□□□ -0.5
RETREG3-201ENST00000309428 IRAK1BP1Q5VVH5 260 aa11.94□□□□□ -0.5
RETREG3-201ENST00000309428 SIMC1Q8NDZ2 872 aa11.94□□□□□ -0.5
RETREG3-201ENST00000309428 C16orf58Q96GQ5 468 aa11.94□□□□□ -0.5
RETREG3-201ENST00000309428 LMLNQ96KR4 655 aa11.94□□□□□ -0.5
RETREG3-201ENST00000309428 SLC35G5Q96KT7 338 aa11.94□□□□□ -0.5
RETREG3-201ENST00000309428 AIF1LQ9BQI0 150 aa11.94□□□□□ -0.5
RETREG3-201ENST00000309428 C1QTNF6Q9BXI9 259 aa11.94□□□□□ -0.5
RETREG3-201ENST00000309428 OR10A4Q9H209 315 aa11.94□□□□□ -0.5
RETREG3-201ENST00000309428 GPM6BQ13491 265 aa11.93□□□□□ -0.5
RETREG3-201ENST00000309428 C1orf61Q13536 156 aa11.93□□□□□ -0.5
RETREG3-201ENST00000309428 CAMK2BQ13554 666 aa11.93□□□□□ -0.5
RETREG3-201ENST00000309428 LIPJQ5W064 366 aa11.93□□□□□ -0.5
RETREG3-201ENST00000309428 TANGO2Q6ICL3 276 aa11.93□□□□□ -0.5
RETREG3-201ENST00000309428 CBARPQ8N350 705 aaPredicted RBP11.93□□□□□ -0.5
RETREG3-201ENST00000309428 KLHL36Q8N4N3 616 aa11.93□□□□□ -0.5
RETREG3-201ENST00000309428 GDPD1Q8N9F7 314 aa11.93□□□□□ -0.5
RETREG3-201ENST00000309428 CYB561A3Q8NBI2 242 aa11.93□□□□□ -0.5
RETREG3-201ENST00000309428 TIFAQ96CG3 184 aa11.93□□□□□ -0.5
RETREG3-201ENST00000309428 FAM46AQ96IP4 442 aaKnown RBP11.93□□□□□ -0.5
RETREG3-201ENST00000309428 HYLS1Q96M11 299 aa11.93□□□□□ -0.5
RETREG3-201ENST00000309428 EPYCQ99645 322 aa11.93□□□□□ -0.5
RETREG3-201ENST00000309428 PDCD10Q9BUL8 212 aa11.93□□□□□ -0.5
RETREG3-201ENST00000309428 DMRT3Q9NQL9 472 aa11.93□□□□□ -0.5
RETREG3-201ENST00000309428 PRDM9Q9NQV7 894 aa11.93□□□□□ -0.5
RETREG3-201ENST00000309428 NOTCH4Q99466 2003 aa11.93□□□□□ -0.5
RETREG3-201ENST00000309428 PSMD9O00233 223 aa11.93□□□□□ -0.5
RETREG3-201ENST00000309428 FMO6PO60774 539 aa11.93□□□□□ -0.5
RETREG3-201ENST00000309428 CSF3P09919 207 aa11.93□□□□□ -0.5
RETREG3-201ENST00000309428 OSMP13725 252 aa11.93□□□□□ -0.5
RETREG3-201ENST00000309428 ZNF30P17039 623 aa11.93□□□□□ -0.5
RETREG3-201ENST00000309428 C4BPBP20851 252 aa11.93□□□□□ -0.5
RETREG3-201ENST00000309428 PYCR1P32322 319 aa11.93□□□□□ -0.5
RETREG3-201ENST00000309428 MMP12P39900 470 aa11.93□□□□□ -0.5
RETREG3-201ENST00000309428 TOR1AIP1Q5JTV8 583 aa11.93□□□□□ -0.5
RETREG3-201ENST00000309428 CCNJQ5T5M9 372 aa11.93□□□□□ -0.5
RETREG3-201ENST00000309428 HENMT1Q5T8I9 393 aaKnown RBP11.93□□□□□ -0.5
RETREG3-201ENST00000309428 SAXO2Q658L1 398 aa11.93□□□□□ -0.5
RETREG3-201ENST00000309428 SIGIRRQ6IA17 410 aa11.93□□□□□ -0.5
RETREG3-201ENST00000309428 NXPE4Q6UWF7 544 aa11.93□□□□□ -0.5
RETREG3-201ENST00000309428 MTSS1LQ765P7 747 aa11.93□□□□□ -0.5
RETREG3-201ENST00000309428 C6orf120Q7Z4R8 191 aa11.93□□□□□ -0.5
RETREG3-201ENST00000309428 PRSS58Q8IYP2 241 aa11.93□□□□□ -0.5
RETREG3-201ENST00000309428 ERMAPQ96PL5 475 aaPredicted RBP11.93□□□□□ -0.5
RETREG3-201ENST00000309428 IFT27Q9BW83 186 aa11.93□□□□□ -0.5
RETREG3-201ENST00000309428 WDR26Q9H7D7 661 aa11.93□□□□□ -0.5
RETREG3-201ENST00000309428 POLHQ9Y253 713 aa11.93□□□□□ -0.5
RETREG3-201ENST00000309428 OR2W5A6NFC9 320 aa11.93□□□□□ -0.5
RETREG3-201ENST00000309428 STK25O00506 426 aa11.93□□□□□ -0.5
RETREG3-201ENST00000309428 RPP14O95059 124 aaKnown RBP11.93□□□□□ -0.5
RETREG3-201ENST00000309428 PDGFAP04085 211 aa11.93□□□□□ -0.5
RETREG3-201ENST00000309428 TYRP1P17643 537 aa11.93□□□□□ -0.5
RETREG3-201ENST00000309428 RHCEP18577 417 aa11.93□□□□□ -0.5
RETREG3-201ENST00000309428 UGT2B10P36537 528 aa11.93□□□□□ -0.5
RETREG3-201ENST00000309428 DDOSTP39656 456 aa11.93□□□□□ -0.5
RETREG3-201ENST00000309428 SIM1P81133 766 aaPredicted RBP11.93□□□□□ -0.5
RETREG3-201ENST00000309428 RBBP4Q09028 425 aa11.93□□□□□ -0.5
RETREG3-201ENST00000309428 SRSF5Q13243 272 aaKnown RBP11.93□□□□□ -0.5
RETREG3-201ENST00000309428 SNTA1Q13424 505 aa11.93□□□□□ -0.5
RETREG3-201ENST00000309428 DEFB110Q30KQ9 67 aa11.93□□□□□ -0.5
RETREG3-201ENST00000309428 KHDRBS2Q5VWX1 349 aaKnown RBP11.93□□□□□ -0.5
RETREG3-201ENST00000309428 POMZP3Q6PJE2 187 aa11.93□□□□□ -0.5
RETREG3-201ENST00000309428 ENPP7Q6UWV6 458 aa11.93□□□□□ -0.5
RETREG3-201ENST00000309428 FAM98AQ8NCA5 519 aaKnown RBP11.93□□□□□ -0.5
RETREG3-201ENST00000309428 OR6K6Q8NGW6 343 aa11.93□□□□□ -0.5
RETREG3-201ENST00000309428 OR51A7Q8NH64 312 aa11.93□□□□□ -0.5
RETREG3-201ENST00000309428 APH1BQ8WW43 257 aa11.93□□□□□ -0.5
RETREG3-201ENST00000309428 GON7Q9BXV9 100 aa11.93□□□□□ -0.5
RETREG3-201ENST00000309428 RDH14Q9HBH5 336 aa11.93□□□□□ -0.5
RETREG3-201ENST00000309428 PAK6Q9NQU5 681 aaPredicted RBP11.93□□□□□ -0.5
RETREG3-201ENST00000309428 KLK4Q9Y5K2 254 aa11.93□□□□□ -0.5
RETREG3-201ENST00000309428 AHCTF1Q8WYP5 2266 aa11.93□□□□□ -0.5
RETREG3-201ENST00000309428 H3BQ06 376 aaPredicted RBP11.92□□□□□ -0.5
RETREG3-201ENST00000309428 PVRP15151 417 aa11.92□□□□□ -0.5
RETREG3-201ENST00000309428 ACTR1BP42025 376 aa11.92□□□□□ -0.5
RETREG3-201ENST00000309428 ACTR1AP61163 376 aa11.92□□□□□ -0.5
RETREG3-201ENST00000309428 PPP3R1P63098 170 aa11.92□□□□□ -0.5
RETREG3-201ENST00000309428 BTN3A2P78410 334 aa11.92□□□□□ -0.5
RETREG3-201ENST00000309428 FGL2Q14314 439 aa11.92□□□□□ -0.5
RETREG3-201ENST00000309428 DEFB134Q4QY38 66 aa11.92□□□□□ -0.5
RETREG3-201ENST00000309428 SPIN4Q56A73 249 aa11.92□□□□□ -0.5
RETREG3-201ENST00000309428 ERN2Q76MJ5 926 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms