RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 TRIM8Q9BZR9 551 aa6.66□□□□□ -1.34
DEPDC1B-201ENST00000265036 SERHL2Q9H4I8 314 aa6.66□□□□□ -1.34
DEPDC1B-201ENST00000265036 METTL7AQ9H8H3 244 aa6.66□□□□□ -1.34
DEPDC1B-201ENST00000265036 C3orf14Q9HBI5 128 aa6.66□□□□□ -1.34
DEPDC1B-201ENST00000265036 NEUROD4Q9HD90 331 aa6.66□□□□□ -1.34
DEPDC1B-201ENST00000265036 SDR39U1Q9NRG7 319 aaPredicted RBP6.66□□□□□ -1.34
DEPDC1B-201ENST00000265036 GIN1Q9NXP7 522 aa6.66□□□□□ -1.34
DEPDC1B-201ENST00000265036 TUBA8Q9NY65 449 aaPredicted RBP6.66□□□□□ -1.34
DEPDC1B-201ENST00000265036 CFL2Q9Y281 166 aa6.66□□□□□ -1.34
DEPDC1B-201ENST00000265036 KLF13Q9Y2Y9 288 aaPredicted RBP6.66□□□□□ -1.34
DEPDC1B-201ENST00000265036 KCNE3Q9Y6H6 103 aa6.66□□□□□ -1.34
DEPDC1B-201ENST00000265036 GNB5O14775 395 aa6.65□□□□□ -1.34
DEPDC1B-201ENST00000265036 EMC8O43402 210 aa6.65□□□□□ -1.34
DEPDC1B-201ENST00000265036 ICOSLGO75144 302 aa6.65□□□□□ -1.34
DEPDC1B-201ENST00000265036 PPM1BO75688 479 aa6.65□□□□□ -1.34
DEPDC1B-201ENST00000265036 UNC5CO95185 931 aa6.65□□□□□ -1.34
DEPDC1B-201ENST00000265036 ZIC2O95409 532 aaPredicted RBP6.65□□□□□ -1.34
DEPDC1B-201ENST00000265036 IGKV1D-16P01601 117 aa6.65□□□□□ -1.34
DEPDC1B-201ENST00000265036 RFPL3SP0C7P2 107 aa6.65□□□□□ -1.34
DEPDC1B-201ENST00000265036 TROVE2P10155 538 aaKnown RBP eCLIP6.65□□□□□ -1.34
DEPDC1B-201ENST00000265036 MAGEA5P43359 124 aa6.65□□□□□ -1.34
DEPDC1B-201ENST00000265036 MASP1P48740 699 aa6.65□□□□□ -1.34
DEPDC1B-201ENST00000265036 TMED10P49755 219 aaKnown RBP6.65□□□□□ -1.34
DEPDC1B-201ENST00000265036 UBAP2LQ14157 1087 aaKnown RBP6.65□□□□□ -1.34
DEPDC1B-201ENST00000265036 ZNHIT3Q15649 155 aaPredicted RBP6.65□□□□□ -1.34
DEPDC1B-201ENST00000265036 PDCD4Q53EL6 469 aaKnown RBP6.65□□□□□ -1.34
DEPDC1B-201ENST00000265036 SLC22A10Q63ZE4 541 aa6.65□□□□□ -1.34
DEPDC1B-201ENST00000265036 SLC2A7Q6PXP3 512 aa6.65□□□□□ -1.34
DEPDC1B-201ENST00000265036 CAMKMTQ7Z624 323 aa6.65□□□□□ -1.34
DEPDC1B-201ENST00000265036 HOMEZQ8IX15 550 aa6.65□□□□□ -1.34
DEPDC1B-201ENST00000265036 SLC34A3Q8N130 599 aa6.65□□□□□ -1.34
DEPDC1B-201ENST00000265036 COX18Q8N8Q8 333 aa6.65□□□□□ -1.34
DEPDC1B-201ENST00000265036 C7orf57Q8NEG2 295 aa6.65□□□□□ -1.34
DEPDC1B-201ENST00000265036 OR8J2Q8NGG1 315 aa6.65□□□□□ -1.34
DEPDC1B-201ENST00000265036 OR52N2Q8NGI0 321 aa6.65□□□□□ -1.34
DEPDC1B-201ENST00000265036 NR4A3Q92570 626 aa6.65□□□□□ -1.34
DEPDC1B-201ENST00000265036 RAB8BQ92930 207 aa6.65□□□□□ -1.34
DEPDC1B-201ENST00000265036 MIB2Q96AX9 1013 aa6.65□□□□□ -1.34
DEPDC1B-201ENST00000265036 TTTY12Q9BZ98 90 aa6.65□□□□□ -1.34
DEPDC1B-201ENST00000265036 DEFB127Q9H1M4 99 aa6.65□□□□□ -1.34
DEPDC1B-201ENST00000265036 Q9N2J8 555 aa6.65□□□□□ -1.34
DEPDC1B-201ENST00000265036 AGPAT4Q9NRZ5 378 aa6.65□□□□□ -1.34
DEPDC1B-201ENST00000265036 SACM1LQ9NTJ5 587 aa6.65□□□□□ -1.34
DEPDC1B-201ENST00000265036 GPATCH2Q9NW75 528 aa6.65□□□□□ -1.34
DEPDC1B-201ENST00000265036 CBLCQ9ULV8 474 aa6.65□□□□□ -1.34
DEPDC1B-201ENST00000265036 MAPRE3Q9UPY8 281 aa6.65□□□□□ -1.34
DEPDC1B-201ENST00000265036 LIPGQ9Y5X9 500 aa6.65□□□□□ -1.34
DEPDC1B-201ENST00000265036 ASH1LQ9NR48 2969 aaKnown RBP6.65□□□□□ -1.34
DEPDC1B-201ENST00000265036 CACNA1CQ13936 2221 aa6.65□□□□□ -1.35
DEPDC1B-201ENST00000265036 PRSS51A0A1B0GVH4 220 aa6.65□□□□□ -1.35
DEPDC1B-201ENST00000265036 J3QKU1 62 aa6.65□□□□□ -1.35
DEPDC1B-201ENST00000265036 RNASET2O00584 256 aaKnown RBP6.65□□□□□ -1.35
DEPDC1B-201ENST00000265036 TGDSO95455 350 aa6.65□□□□□ -1.35
DEPDC1B-201ENST00000265036 CAPN3P20807 821 aa6.65□□□□□ -1.35
DEPDC1B-201ENST00000265036 KRT20P35900 424 aa6.65□□□□□ -1.35
DEPDC1B-201ENST00000265036 CHI3L1P36222 383 aaPredicted RBP6.65□□□□□ -1.35
DEPDC1B-201ENST00000265036 POLR2JP52435 117 aaKnown RBP6.65□□□□□ -1.35
DEPDC1B-201ENST00000265036 C21orf58P58505 322 aa6.65□□□□□ -1.35
DEPDC1B-201ENST00000265036 FOXK1P85037 733 aa6.65□□□□□ -1.35
DEPDC1B-201ENST00000265036 ALDH6A1Q02252 535 aaKnown RBP6.65□□□□□ -1.35
DEPDC1B-201ENST00000265036 TOMM20Q15388 145 aa6.65□□□□□ -1.35
DEPDC1B-201ENST00000265036 GSTA3Q16772 222 aa6.65□□□□□ -1.35
DEPDC1B-201ENST00000265036 VPS26BQ4G0F5 336 aa6.65□□□□□ -1.35
DEPDC1B-201ENST00000265036 AGKQ53H12 422 aa6.65□□□□□ -1.35
DEPDC1B-201ENST00000265036 C3P1Q6ZMU1 363 aa6.65□□□□□ -1.35
DEPDC1B-201ENST00000265036 ZNF621Q6ZSS3 439 aa6.65□□□□□ -1.35
DEPDC1B-201ENST00000265036 FUNDC1Q8IVP5 155 aa6.65□□□□□ -1.35
DEPDC1B-201ENST00000265036 ZNF614Q8N883 585 aa6.65□□□□□ -1.35
DEPDC1B-201ENST00000265036 FAM98AQ8NCA5 519 aaKnown RBP6.65□□□□□ -1.35
DEPDC1B-201ENST00000265036 PRR7Q8TB68 274 aa6.65□□□□□ -1.35
DEPDC1B-201ENST00000265036 PAQR8Q8TEZ7 354 aa6.65□□□□□ -1.35
DEPDC1B-201ENST00000265036 TP53INP1Q96A56 240 aa6.65□□□□□ -1.35
DEPDC1B-201ENST00000265036 SLC35G5Q96KT7 338 aa6.65□□□□□ -1.35
DEPDC1B-201ENST00000265036 SGCZQ96LD1 299 aa6.65□□□□□ -1.35
DEPDC1B-201ENST00000265036 SLC35A5Q9BS91 424 aa6.65□□□□□ -1.35
DEPDC1B-201ENST00000265036 RTN4RQ9BZR6 473 aa6.65□□□□□ -1.35
DEPDC1B-201ENST00000265036 TRIM45Q9H8W5 580 aaPredicted RBP6.65□□□□□ -1.35
DEPDC1B-201ENST00000265036 PROK2Q9HC23 129 aa6.65□□□□□ -1.35
DEPDC1B-201ENST00000265036 PLSCR2Q9NRY7 297 aa6.65□□□□□ -1.35
DEPDC1B-201ENST00000265036 VPS4AQ9UN37 437 aa6.65□□□□□ -1.35
DEPDC1B-201ENST00000265036 PCDHGB4Q9UN71 923 aa6.65□□□□□ -1.35
DEPDC1B-201ENST00000265036 ASPDHA6ND91 283 aa6.64□□□□□ -1.35
DEPDC1B-201ENST00000265036 ANKUB1A6NFN9 424 aa6.64□□□□□ -1.35
DEPDC1B-201ENST00000265036 LRRC3CA6NJW4 275 aa6.64□□□□□ -1.35
DEPDC1B-201ENST00000265036 KLRC4-KLRK1H3BQV0 150 aa6.64□□□□□ -1.35
DEPDC1B-201ENST00000265036 TP53I11O14683 189 aa6.64□□□□□ -1.35
DEPDC1B-201ENST00000265036 ACOX3O15254 700 aa6.64□□□□□ -1.35
DEPDC1B-201ENST00000265036 BCAS2O75934 225 aaPredicted RBP6.64□□□□□ -1.35
DEPDC1B-201ENST00000265036 ANP32DO95626 131 aa6.64□□□□□ -1.35
DEPDC1B-201ENST00000265036 CYP4B1P13584 511 aa6.64□□□□□ -1.35
DEPDC1B-201ENST00000265036 DDX5P17844 614 aaKnown RBP6.64□□□□□ -1.35
DEPDC1B-201ENST00000265036 DRD5P21918 477 aa6.64□□□□□ -1.35
DEPDC1B-201ENST00000265036 CASP3P42574 277 aa6.64□□□□□ -1.35
DEPDC1B-201ENST00000265036 TDGF1P3P51864 188 aa6.64□□□□□ -1.35
DEPDC1B-201ENST00000265036 ARFIP2P53365 341 aa6.64□□□□□ -1.35
DEPDC1B-201ENST00000265036 MRPS22P82650 360 aaKnown RBP6.64□□□□□ -1.35
DEPDC1B-201ENST00000265036 DPY19L1Q2PZI1 675 aa6.64□□□□□ -1.35
DEPDC1B-201ENST00000265036 RNF130Q86XS8 419 aa6.64□□□□□ -1.35
DEPDC1B-201ENST00000265036 GOLM1Q8NBJ4 401 aa6.64□□□□□ -1.35
DEPDC1B-201ENST00000265036 C17orf47Q8NEP4 570 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms