RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 POU3F4P49335 361 aa3.02□□□□□ -1.93
CCDC7-216ENST00000640058 RAG2P55895 527 aa3.02□□□□□ -1.93
CCDC7-216ENST00000640058 RPA4Q13156 261 aa3.02□□□□□ -1.93
CCDC7-216ENST00000640058 IFI44LQ53G44 452 aa3.02□□□□□ -1.93
CCDC7-216ENST00000640058 TFAP2EQ6VUC0 442 aa3.02□□□□□ -1.93
CCDC7-216ENST00000640058 CNTN4Q8IWV2 1026 aa3.02□□□□□ -1.93
CCDC7-216ENST00000640058 SFRP1Q8N474 314 aa3.02□□□□□ -1.93
CCDC7-216ENST00000640058 OR4F17Q8NGA8 305 aa3.02□□□□□ -1.93
CCDC7-216ENST00000640058 OR4A16Q8NH70 328 aa3.02□□□□□ -1.93
CCDC7-216ENST00000640058 FNDC8Q8TC99 324 aa3.02□□□□□ -1.93
CCDC7-216ENST00000640058 DHTKD1Q96HY7 919 aaPredicted RBP3.02□□□□□ -1.93
CCDC7-216ENST00000640058 CCDC43Q96MW1 224 aaKnown RBP3.02□□□□□ -1.93
CCDC7-216ENST00000640058 OR4F4Q96R69 305 aa3.02□□□□□ -1.93
CCDC7-216ENST00000640058 APOOQ9BUR5 198 aa3.02□□□□□ -1.93
CCDC7-216ENST00000640058 OPN3Q9H1Y3 402 aaPredicted RBP3.02□□□□□ -1.93
CCDC7-216ENST00000640058 PRMT8Q9NR22 394 aaPredicted RBP3.02□□□□□ -1.93
CCDC7-216ENST00000640058 ACOXLQ9NUZ1 547 aa3.02□□□□□ -1.93
CCDC7-216ENST00000640058 MAD2L2Q9UI95 211 aa3.02□□□□□ -1.93
CCDC7-216ENST00000640058 APPL1Q9UKG1 709 aa3.02□□□□□ -1.93
CCDC7-216ENST00000640058 FBXW2Q9UKT8 454 aa3.02□□□□□ -1.93
CCDC7-216ENST00000640058 PDE10AQ9Y233 779 aa3.02□□□□□ -1.93
CCDC7-216ENST00000640058 FOXA2Q9Y261 457 aaPredicted RBP3.02□□□□□ -1.93
CCDC7-216ENST00000640058 MEGF6O75095 1541 aa3.02□□□□□ -1.93
CCDC7-216ENST00000640058 C5orf51A6NDU8 294 aa3.01□□□□□ -1.93
CCDC7-216ENST00000640058 TRIM49D1C9J1S8 452 aa3.01□□□□□ -1.93
CCDC7-216ENST00000640058 DDX39AO00148 427 aaKnown RBP3.01□□□□□ -1.93
CCDC7-216ENST00000640058 CTNNB1P35222 781 aa3.01□□□□□ -1.93
CCDC7-216ENST00000640058 ACVR1BP36896 505 aa3.01□□□□□ -1.93
CCDC7-216ENST00000640058 NME5P56597 212 aa3.01□□□□□ -1.93
CCDC7-216ENST00000640058 UBXN1Q04323 297 aa3.01□□□□□ -1.93
CCDC7-216ENST00000640058 IL17AQ16552 155 aa3.01□□□□□ -1.93
CCDC7-216ENST00000640058 SHROOM1Q2M3G4 852 aaPredicted RBP3.01□□□□□ -1.93
CCDC7-216ENST00000640058 HFEQ30201 348 aa3.01□□□□□ -1.93
CCDC7-216ENST00000640058 GPAT3Q53EU6 434 aa3.01□□□□□ -1.93
CCDC7-216ENST00000640058 SPATA46Q5T0L3 261 aa3.01□□□□□ -1.93
CCDC7-216ENST00000640058 ATRAIDQ6UW56 229 aa3.01□□□□□ -1.93
CCDC7-216ENST00000640058 TSEN54Q7Z6J9 526 aaKnown RBP3.01□□□□□ -1.93
CCDC7-216ENST00000640058 C5orf30Q96GV9 206 aa3.01□□□□□ -1.93
CCDC7-216ENST00000640058 PLEKHF1Q96S99 279 aa3.01□□□□□ -1.93
CCDC7-216ENST00000640058 DPH7Q9BTV6 452 aa3.01□□□□□ -1.93
CCDC7-216ENST00000640058 AKIRIN1Q9H9L7 192 aaPredicted RBP3.01□□□□□ -1.93
CCDC7-216ENST00000640058 HPS4Q9NQG7 708 aa3.01□□□□□ -1.93
CCDC7-216ENST00000640058 CYP39A1Q9NYL5 469 aa3.01□□□□□ -1.93
CCDC7-216ENST00000640058 KNSTRNQ9Y448 316 aa3.01□□□□□ -1.93
CCDC7-216ENST00000640058 SNX5Q9Y5X3 404 aa3.01□□□□□ -1.93
CCDC7-216ENST00000640058 ARHGAP23Q9P227 1491 aa3.01□□□□□ -1.93
CCDC7-216ENST00000640058 NPIPA5A0A0B4J1W7 369 aa3□□□□□ -1.93
CCDC7-216ENST00000640058 A0A0J9YVX5 310 aa3□□□□□ -1.93
CCDC7-216ENST00000640058 TRIM64A6NGJ6 449 aa3□□□□□ -1.93
CCDC7-216ENST00000640058 TRIM64BA6NI03 449 aa3□□□□□ -1.93
CCDC7-216ENST00000640058 NPIPA5E9PKD4 350 aa3□□□□□ -1.93
CCDC7-216ENST00000640058 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3□□□□□ -1.93
CCDC7-216ENST00000640058 CACNB4O00305 520 aaPredicted RBP3□□□□□ -1.93
CCDC7-216ENST00000640058 MAT2AP31153 395 aaKnown RBP3□□□□□ -1.93
CCDC7-216ENST00000640058 UGT1A3P35503 534 aa3□□□□□ -1.93
CCDC7-216ENST00000640058 CAV2P51636 162 aa3□□□□□ -1.93
CCDC7-216ENST00000640058 METAP1P53582 386 aa3□□□□□ -1.93
CCDC7-216ENST00000640058 ARF5P84085 180 aa3□□□□□ -1.93
CCDC7-216ENST00000640058 NPRL3Q12980 569 aa3□□□□□ -1.93
CCDC7-216ENST00000640058 PPP2R5CQ13362 524 aa3□□□□□ -1.93
CCDC7-216ENST00000640058 IL18R1Q13478 541 aa3□□□□□ -1.93
CCDC7-216ENST00000640058 SBK1Q52WX2 424 aa3□□□□□ -1.93
CCDC7-216ENST00000640058 TMEM179BQ7Z7N9 219 aa3□□□□□ -1.93
CCDC7-216ENST00000640058 PSMA8Q8TAA3 256 aa3□□□□□ -1.93
CCDC7-216ENST00000640058 ACCSQ96QU6 501 aa3□□□□□ -1.93
CCDC7-216ENST00000640058 TM2D1Q9BX74 207 aa3□□□□□ -1.93
CCDC7-216ENST00000640058 CARD9Q9H257 536 aa3□□□□□ -1.93
CCDC7-216ENST00000640058 COMMD8Q9NX08 183 aa3□□□□□ -1.93
CCDC7-216ENST00000640058 VPS54Q9P1Q0 977 aa3□□□□□ -1.93
CCDC7-216ENST00000640058 ERVK-18Q9QC07 812 aa3□□□□□ -1.93
CCDC7-216ENST00000640058 ZNF221Q9UK13 617 aa3□□□□□ -1.93
CCDC7-216ENST00000640058 KLK12Q9UKR0 248 aa3□□□□□ -1.93
CCDC7-216ENST00000640058 RPH3AQ9Y2J0 694 aaPredicted RBP3□□□□□ -1.93
CCDC7-216ENST00000640058 TEX264Q9Y6I9 313 aa3□□□□□ -1.93
CCDC7-216ENST00000640058 CFLARO15519 480 aa2.99□□□□□ -1.93
CCDC7-216ENST00000640058 VEGFDO43915 354 aa2.99□□□□□ -1.93
CCDC7-216ENST00000640058 SFTPBP07988 381 aa2.99□□□□□ -1.93
CCDC7-216ENST00000640058 HOXB7P09629 217 aa2.99□□□□□ -1.93
CCDC7-216ENST00000640058 HLA-DPA1P20036 260 aa2.99□□□□□ -1.93
CCDC7-216ENST00000640058 SLC26A2P50443 739 aa2.99□□□□□ -1.93
CCDC7-216ENST00000640058 PUDPQ08623 228 aa2.99□□□□□ -1.93
CCDC7-216ENST00000640058 AP1B1Q10567 949 aa2.99□□□□□ -1.93
CCDC7-216ENST00000640058 CDC37Q16543 378 aaPredicted RBP2.99□□□□□ -1.93
CCDC7-216ENST00000640058 ZNF528Q3MIS6 628 aa2.99□□□□□ -1.93
CCDC7-216ENST00000640058 ZNF410Q86VK4 478 aa2.99□□□□□ -1.93
CCDC7-216ENST00000640058 SERPINA12Q8IW75 414 aa2.99□□□□□ -1.93
CCDC7-216ENST00000640058 OR10H4Q8NGA5 316 aa2.99□□□□□ -1.93
CCDC7-216ENST00000640058 SNX21Q969T3 373 aa2.99□□□□□ -1.93
CCDC7-216ENST00000640058 RAB39BQ96DA2 213 aa2.99□□□□□ -1.93
CCDC7-216ENST00000640058 DNAJA3Q96EY1 480 aa2.99□□□□□ -1.93
CCDC7-216ENST00000640058 EEF2KMTQ96G04 330 aa2.99□□□□□ -1.93
CCDC7-216ENST00000640058 ACAT2Q9BWD1 397 aa2.99□□□□□ -1.93
CCDC7-216ENST00000640058 Q9H3A6 140 aa2.99□□□□□ -1.93
CCDC7-216ENST00000640058 EHD1Q9H4M9 534 aa2.99□□□□□ -1.93
CCDC7-216ENST00000640058 DBNDD1Q9H9R9 158 aa2.99□□□□□ -1.93
CCDC7-216ENST00000640058 NARFQ9UHQ1 456 aa2.99□□□□□ -1.93
CCDC7-216ENST00000640058 SYNJ2O15056 1496 aa2.98□□□□□ -1.93
CCDC7-216ENST00000640058 WWP2O00308 870 aa2.98□□□□□ -1.93
CCDC7-216ENST00000640058 KERAO60938 352 aa2.98□□□□□ -1.93
CCDC7-216ENST00000640058 YBEYP58557 167 aaPredicted RBP2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms