RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 RFWD3Q6PCD5 774 aa3.96□□□□□ -1.78
CPNE3-213ENST00000622183 CBLN3Q6UW01 205 aa3.96□□□□□ -1.78
CPNE3-213ENST00000622183 METTL7BQ6UX53 244 aa3.96□□□□□ -1.78
CPNE3-213ENST00000622183 HACD2Q6Y1H2 254 aa3.96□□□□□ -1.78
CPNE3-213ENST00000622183 TSEN54Q7Z6J9 526 aaKnown RBP3.96□□□□□ -1.78
CPNE3-213ENST00000622183 HSCBQ8IWL3 235 aa3.96□□□□□ -1.78
CPNE3-213ENST00000622183 Q8N377 158 aa3.96□□□□□ -1.78
CPNE3-213ENST00000622183 STKLD1Q8NE28 680 aa3.96□□□□□ -1.78
CPNE3-213ENST00000622183 OR52J3Q8NH60 311 aa3.96□□□□□ -1.78
CPNE3-213ENST00000622183 THRSPQ92748 146 aa3.96□□□□□ -1.78
CPNE3-213ENST00000622183 ZNF689Q96CS4 500 aaPredicted RBP3.96□□□□□ -1.78
CPNE3-213ENST00000622183 TRIM44Q96DX7 344 aaPredicted RBP3.96□□□□□ -1.78
CPNE3-213ENST00000622183 VPS39Q96JC1 886 aa3.96□□□□□ -1.78
CPNE3-213ENST00000622183 TBCDQ9BTW9 1192 aa3.96□□□□□ -1.78
CPNE3-213ENST00000622183 RNF41Q9H4P4 317 aaPredicted RBP3.96□□□□□ -1.78
CPNE3-213ENST00000622183 ADGRL4Q9HBW9 690 aa3.96□□□□□ -1.78
CPNE3-213ENST00000622183 POLD4Q9HCU8 107 aa3.96□□□□□ -1.78
CPNE3-213ENST00000622183 ESM1Q9NQ30 184 aa3.96□□□□□ -1.78
CPNE3-213ENST00000622183 DCAF13Q9NV06 445 aaKnown RBP3.96□□□□□ -1.78
CPNE3-213ENST00000622183 CCDC7Q96M83 1385 aa3.95□□□□□ -1.78
CPNE3-213ENST00000622183 A0A0J9YWU9 116 aa3.95□□□□□ -1.78
CPNE3-213ENST00000622183 WASHC1A8K0Z3 465 aa3.95□□□□□ -1.78
CPNE3-213ENST00000622183 SDHDO14521 159 aa3.95□□□□□ -1.78
CPNE3-213ENST00000622183 SDC3O75056 442 aa3.95□□□□□ -1.78
CPNE3-213ENST00000622183 CHRNA1P02708 482 aa3.95□□□□□ -1.78
CPNE3-213ENST00000622183 PCCBP05166 539 aa3.95□□□□□ -1.78
CPNE3-213ENST00000622183 GSTT2P0CG29 244 aa3.95□□□□□ -1.78
CPNE3-213ENST00000622183 GSTT2BP0CG30 244 aa3.95□□□□□ -1.78
CPNE3-213ENST00000622183 UQCRBP14927 111 aa3.95□□□□□ -1.78
CPNE3-213ENST00000622183 STK19P49842 368 aaPredicted RBP3.95□□□□□ -1.78
CPNE3-213ENST00000622183 MFAP2P55001 183 aa3.95□□□□□ -1.78
CPNE3-213ENST00000622183 EIF2B1Q14232 305 aaKnown RBP3.95□□□□□ -1.78
CPNE3-213ENST00000622183 FCN2Q15485 313 aa3.95□□□□□ -1.78
CPNE3-213ENST00000622183 ACER2Q5QJU3 275 aa3.95□□□□□ -1.78
CPNE3-213ENST00000622183 SEL1L2Q5TEA6 688 aa3.95□□□□□ -1.78
CPNE3-213ENST00000622183 PRR5LQ6MZQ0 368 aa3.95□□□□□ -1.78
CPNE3-213ENST00000622183 TMEM184AQ6ZMB5 413 aa3.95□□□□□ -1.78
CPNE3-213ENST00000622183 TMUB2Q71RG4 321 aa3.95□□□□□ -1.78
CPNE3-213ENST00000622183 Q7L0L9 218 aa3.95□□□□□ -1.78
CPNE3-213ENST00000622183 GRAMD2AQ8IUY3 354 aa3.95□□□□□ -1.78
CPNE3-213ENST00000622183 LRRC49Q8IUZ0 686 aa3.95□□□□□ -1.78
CPNE3-213ENST00000622183 ABHD12Q8N2K0 398 aa3.95□□□□□ -1.78
CPNE3-213ENST00000622183 IPMKQ8NFU5 416 aa3.95□□□□□ -1.78
CPNE3-213ENST00000622183 WBP1Q96G27 269 aa3.95□□□□□ -1.78
CPNE3-213ENST00000622183 NAF1Q96HR8 494 aaKnown RBP3.95□□□□□ -1.78
CPNE3-213ENST00000622183 HPDLQ96IR7 371 aa3.95□□□□□ -1.78
CPNE3-213ENST00000622183 RBM4BQ9BQ04 359 aaKnown RBP3.95□□□□□ -1.78
CPNE3-213ENST00000622183 HEXA-AS1Q9H8Q6 139 aa3.95□□□□□ -1.78
CPNE3-213ENST00000622183 FARSBQ9NSD9 589 aaKnown RBP3.95□□□□□ -1.78
CPNE3-213ENST00000622183 ABCC13Q9NSE7 274 aa3.95□□□□□ -1.78
CPNE3-213ENST00000622183 C1orf123Q9NWV4 160 aa3.95□□□□□ -1.78
CPNE3-213ENST00000622183 DUS2Q9NX74 493 aaKnown RBP3.95□□□□□ -1.78
CPNE3-213ENST00000622183 RDH8Q9NYR8 311 aa3.95□□□□□ -1.78
CPNE3-213ENST00000622183 AP4B1Q9Y6B7 739 aa3.95□□□□□ -1.78
CPNE3-213ENST00000622183 A0A1W2PPR1 153 aa3.94□□□□□ -1.78
CPNE3-213ENST00000622183 MFSD2BA6NFX1 497 aa3.94□□□□□ -1.78
CPNE3-213ENST00000622183 MCF2LO15068 1137 aa3.94□□□□□ -1.78
CPNE3-213ENST00000622183 TM9SF1O15321 606 aa3.94□□□□□ -1.78
CPNE3-213ENST00000622183 TYROBPO43914 113 aa3.94□□□□□ -1.78
CPNE3-213ENST00000622183 ASNSP08243 561 aa3.94□□□□□ -1.78
CPNE3-213ENST00000622183 SNRPCP09234 159 aaKnown RBP3.94□□□□□ -1.78
CPNE3-213ENST00000622183 EPB41P11171 864 aaKnown RBP3.94□□□□□ -1.78
CPNE3-213ENST00000622183 CYLC1P35663 651 aaPredicted RBP3.94□□□□□ -1.78
CPNE3-213ENST00000622183 ACADVLP49748 655 aa3.94□□□□□ -1.78
CPNE3-213ENST00000622183 TFDP1Q14186 410 aa3.94□□□□□ -1.78
CPNE3-213ENST00000622183 LINC01620Q4KN68 170 aa3.94□□□□□ -1.78
CPNE3-213ENST00000622183 FAM219BQ5XKK7 198 aa3.94□□□□□ -1.78
CPNE3-213ENST00000622183 ASPHD2Q6ICH7 369 aa3.94□□□□□ -1.78
CPNE3-213ENST00000622183 PNCKQ6P2M8 343 aa3.94□□□□□ -1.78
CPNE3-213ENST00000622183 PAQR6Q6TCH4 344 aa3.94□□□□□ -1.78
CPNE3-213ENST00000622183 CENPUQ71F23 418 aa3.94□□□□□ -1.78
CPNE3-213ENST00000622183 ZNF440Q8IYI8 595 aa3.94□□□□□ -1.78
CPNE3-213ENST00000622183 ARL14Q8N4G2 192 aa3.94□□□□□ -1.78
CPNE3-213ENST00000622183 SUMF1Q8NBK3 374 aa3.94□□□□□ -1.78
CPNE3-213ENST00000622183 CSNK1G2-AS1Q8NCQ2 148 aa3.94□□□□□ -1.78
CPNE3-213ENST00000622183 OR5AU1Q8NGC0 362 aa3.94□□□□□ -1.78
CPNE3-213ENST00000622183 ART4Q93070 314 aa3.94□□□□□ -1.78
CPNE3-213ENST00000622183 RAB3CQ96E17 227 aa3.94□□□□□ -1.78
CPNE3-213ENST00000622183 TBC1D10AQ9BXI6 508 aa3.94□□□□□ -1.78
CPNE3-213ENST00000622183 TRIM15Q9C019 465 aa3.94□□□□□ -1.78
CPNE3-213ENST00000622183 TRIM9Q9C026 710 aa3.94□□□□□ -1.78
CPNE3-213ENST00000622183 CALHM2Q9HA72 323 aa3.94□□□□□ -1.78
CPNE3-213ENST00000622183 AMBNQ9NP70 447 aa3.94□□□□□ -1.78
CPNE3-213ENST00000622183 AATFQ9NY61 560 aaKnown RBP eCLIP3.94□□□□□ -1.78
CPNE3-213ENST00000622183 RNF6Q9Y252 685 aa3.94□□□□□ -1.78
CPNE3-213ENST00000622183 MOB4Q9Y3A3 225 aa3.94□□□□□ -1.78
CPNE3-213ENST00000622183 EXOSC1Q9Y3B2 195 aaKnown RBP3.94□□□□□ -1.78
CPNE3-213ENST00000622183 PRSS21Q9Y6M0 314 aa3.94□□□□□ -1.78
CPNE3-213ENST00000622183 SF3B1O75533 1304 aaKnown RBP eCLIP3.94□□□□□ -1.78
CPNE3-213ENST00000622183 TRIM49BA6NDI0 452 aa3.93□□□□□ -1.78
CPNE3-213ENST00000622183 E2F3O00716 465 aa3.93□□□□□ -1.78
CPNE3-213ENST00000622183 IGHV3-9P01782 118 aa3.93□□□□□ -1.78
CPNE3-213ENST00000622183 IGHG3P01860 377 aa3.93□□□□□ -1.78
CPNE3-213ENST00000622183 MT-ND1P03886 318 aa3.93□□□□□ -1.78
CPNE3-213ENST00000622183 ZNF883P0CG24 379 aa3.93□□□□□ -1.78
CPNE3-213ENST00000622183 DRD5P21918 477 aa3.93□□□□□ -1.78
CPNE3-213ENST00000622183 ZNF33BQ06732 778 aa3.93□□□□□ -1.78
CPNE3-213ENST00000622183 C17orf58Q2M2W7 97 aa3.93□□□□□ -1.78
CPNE3-213ENST00000622183 TMEM44Q2T9K0 475 aa3.93□□□□□ -1.78
CPNE3-213ENST00000622183 ANKDD1AQ495B1 522 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms