RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 A0A1B0GV72 72 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 SNRPGP15A8MWD9 76 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 M0QYT0 321 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 PI15O43692 258 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 RHOP08100 348 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 ITGB8P26012 769 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 BMPR1AP36894 532 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 RFX5P48382 616 aaPredicted RBP4.72□□□□□ -1.65
VPS13D-213ENST00000613099 GID4Q8IVV7 300 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 APCDD1Q8J025 514 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 MEGF10Q96KG7 1140 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 CMSS1Q9BQ75 279 aaKnown RBP4.72□□□□□ -1.65
VPS13D-213ENST00000613099 ACSS2Q9NR19 701 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 PUS1Q9Y606 427 aaKnown RBP eCLIP4.72□□□□□ -1.65
VPS13D-213ENST00000613099 ARHGAP33O14559 1287 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 AAK1Q2M2I8 961 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 TDRD3Q9H7E2 651 aaKnown RBP4.72□□□□□ -1.65
VPS13D-213ENST00000613099 ZNF302Q9NR11 478 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 LGALS8O00214 317 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 ACOT8O14734 319 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 SLC16A8O95907 504 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 TCRBP04435 133 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 ELK1P19419 428 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 SREBF1P36956 1147 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 OR1G1P47890 313 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 IRF4Q15306 451 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 XYLT1Q86Y38 959 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 OR14A16Q8NHC5 309 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 APH1BQ8WW43 257 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 EVPLQ92817 2033 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 ISL2Q96A47 359 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 FBXL3Q9UKT7 428 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 MT-CO2P00403 227 aa4.71□□□□□ -1.65
VPS13D-213ENST00000613099 ENGP17813 658 aa4.71□□□□□ -1.65
VPS13D-213ENST00000613099 C21orf33P30042 268 aaPredicted RBP4.71□□□□□ -1.65
VPS13D-213ENST00000613099 UBE2IP63279 158 aaKnown RBP4.71□□□□□ -1.65
VPS13D-213ENST00000613099 CRYZQ08257 329 aaKnown RBP4.71□□□□□ -1.65
VPS13D-213ENST00000613099 SCGB2A2Q13296 93 aa4.71□□□□□ -1.65
VPS13D-213ENST00000613099 ERV3-1Q14264 604 aa4.71□□□□□ -1.65
VPS13D-213ENST00000613099 OR2G2Q8NGZ5 317 aa4.71□□□□□ -1.65
VPS13D-213ENST00000613099 HAS2Q92819 552 aa4.71□□□□□ -1.65
VPS13D-213ENST00000613099 DOHHQ9BU89 302 aa4.71□□□□□ -1.65
VPS13D-213ENST00000613099 FAIM2Q9BWQ8 316 aa4.71□□□□□ -1.65
VPS13D-213ENST00000613099 DCAF13Q9NV06 445 aaKnown RBP4.71□□□□□ -1.65
VPS13D-213ENST00000613099 GPATCH2LQ9NWQ4 482 aa4.71□□□□□ -1.65
VPS13D-213ENST00000613099 TCF21O43680 179 aa4.71□□□□□ -1.65
VPS13D-213ENST00000613099 CCND3P30281 292 aaPredicted RBP4.71□□□□□ -1.65
VPS13D-213ENST00000613099 PPP4CP60510 307 aa4.71□□□□□ -1.65
VPS13D-213ENST00000613099 FAM109BQ6ICB4 259 aaPredicted RBP4.71□□□□□ -1.65
VPS13D-213ENST00000613099 SLC29A4Q7RTT9 530 aa4.71□□□□□ -1.65
VPS13D-213ENST00000613099 SIAH3Q8IW03 269 aa4.71□□□□□ -1.65
VPS13D-213ENST00000613099 FAM98AQ8NCA5 519 aaKnown RBP4.71□□□□□ -1.65
VPS13D-213ENST00000613099 METTL1Q9UBP6 276 aaKnown RBP4.71□□□□□ -1.65
VPS13D-213ENST00000613099 PSORS1C1Q9UIG5 152 aa4.71□□□□□ -1.65
VPS13D-213ENST00000613099 HIF3AQ9Y2N7 669 aa4.71□□□□□ -1.65
VPS13D-213ENST00000613099 KIAA0100Q14667 2235 aaKnown RBP4.71□□□□□ -1.65
VPS13D-213ENST00000613099 GPR25O00155 361 aa4.71□□□□□ -1.65
VPS13D-213ENST00000613099 RBMXP38159 391 aaKnown RBP4.71□□□□□ -1.65
VPS13D-213ENST00000613099 PNLIPRP1P54315 467 aa4.71□□□□□ -1.65
VPS13D-213ENST00000613099 GPR162Q16538 588 aa4.71□□□□□ -1.65
VPS13D-213ENST00000613099 KIAA0930Q6ICG6 404 aaPredicted RBP4.71□□□□□ -1.65
VPS13D-213ENST00000613099 LIPIQ6XZB0 460 aa4.71□□□□□ -1.65
VPS13D-213ENST00000613099 OR7D4Q8NG98 312 aa4.71□□□□□ -1.65
VPS13D-213ENST00000613099 ALG8Q9BVK2 526 aa4.71□□□□□ -1.65
VPS13D-213ENST00000613099 BCL2L14Q9BZR8 327 aa4.71□□□□□ -1.65
VPS13D-213ENST00000613099 ZNF275Q9NSD4 429 aaPredicted RBP4.71□□□□□ -1.65
VPS13D-213ENST00000613099 MIOSQ9NXC5 875 aa4.71□□□□□ -1.65
VPS13D-213ENST00000613099 PCDHB11Q9Y5F2 797 aa4.71□□□□□ -1.65
VPS13D-213ENST00000613099 C2orf92A0A1B0GVN3 265 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 MATN4O95460 622 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 PTBP3O95758 552 aaKnown RBP4.71□□□□□ -1.66
VPS13D-213ENST00000613099 TXNDC12O95881 172 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 EDN3P14138 238 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 SOX3P41225 446 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 GABRA2P47869 451 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 CREB5Q02930 508 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 CCINQ13939 588 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 PTPRRQ15256 657 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 KANSL1Q7Z3B3 1105 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 GPR155Q7Z3F1 870 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 IGDCC3Q8IVU1 814 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 NAXDQ8IW45 347 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 SERPINA12Q8IW75 414 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 LILRB2Q8N423 598 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 PCYT2Q99447 389 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 RNF146Q9NTX7 359 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 TAAR5O14804 337 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 FFAR3O14843 346 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 GPR42O15529 346 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 EIF1BO60739 113 aaKnown RBP4.71□□□□□ -1.66
VPS13D-213ENST00000613099 CLEC3BP05452 202 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 DCTP40126 519 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 EIF1P41567 113 aaKnown RBP4.71□□□□□ -1.66
VPS13D-213ENST00000613099 LRFN4Q6PJG9 635 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 ENPP6Q6UWR7 440 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 PXKQ7Z7A4 578 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 ARHGAP12Q8IWW6 846 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 LIX1Q8N485 282 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 HJURPQ8NCD3 748 aaPredicted RBP4.71□□□□□ -1.66
VPS13D-213ENST00000613099 ATOH1Q92858 354 aaPredicted RBP4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms