RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 ALPPP05187 535 aa20.09■□□□□ 0.81
USP6NL-204ENST00000606752 PABPC4LP0CB38 370 aaKnown RBP20.09■□□□□ 0.81
USP6NL-204ENST00000606752 GABRA3P34903 492 aa20.09■□□□□ 0.81
USP6NL-204ENST00000606752 YAP1P46937 504 aaKnown RBP20.09■□□□□ 0.81
USP6NL-204ENST00000606752 PGDP52209 483 aa20.09■□□□□ 0.81
USP6NL-204ENST00000606752 ZNF155Q12901 538 aaPredicted RBP20.09■□□□□ 0.81
USP6NL-204ENST00000606752 FRRS1Q6ZNA5 592 aa20.09■□□□□ 0.81
USP6NL-204ENST00000606752 CARM1Q86X55 608 aa20.09■□□□□ 0.81
USP6NL-204ENST00000606752 SLC38A9Q8NBW4 561 aa20.09■□□□□ 0.81
USP6NL-204ENST00000606752 GATA6Q92908 595 aa20.09■□□□□ 0.81
USP6NL-204ENST00000606752 ZG16BQ96DA0 208 aa20.09■□□□□ 0.81
USP6NL-204ENST00000606752 CNBD2Q96M20 576 aa20.09■□□□□ 0.81
USP6NL-204ENST00000606752 LMF2Q9BU23 707 aaKnown RBP20.09■□□□□ 0.81
USP6NL-204ENST00000606752 CNPPD1Q9BV87 410 aa20.09■□□□□ 0.81
USP6NL-204ENST00000606752 PINK1Q9BXM7 581 aa20.09■□□□□ 0.81
USP6NL-204ENST00000606752 QRSL1Q9H0R6 528 aaKnown RBP20.09■□□□□ 0.81
USP6NL-204ENST00000606752 GABARAPL1Q9H0R8 117 aa20.09■□□□□ 0.81
USP6NL-204ENST00000606752 OCIAD1Q9NX40 245 aa20.09■□□□□ 0.81
USP6NL-204ENST00000606752 WDR45Q9Y484 360 aa20.09■□□□□ 0.81
USP6NL-204ENST00000606752 TESMINQ9Y4I5 508 aa20.09■□□□□ 0.81
USP6NL-204ENST00000606752 HEMK1Q9Y5R4 338 aaPredicted RBP20.09■□□□□ 0.81
USP6NL-204ENST00000606752 ASCC3Q8N3C0 2202 aaKnown RBP20.09■□□□□ 0.81
USP6NL-204ENST00000606752 DMDP11532 3685 aa20.09■□□□□ 0.81
USP6NL-204ENST00000606752 CDX4O14627 284 aaPredicted RBP20.09■□□□□ 0.81
USP6NL-204ENST00000606752 PRAMEF2O60811 474 aa20.09■□□□□ 0.81
USP6NL-204ENST00000606752 SNAP29O95721 258 aa20.09■□□□□ 0.81
USP6NL-204ENST00000606752 LGI1O95970 557 aa20.09■□□□□ 0.81
USP6NL-204ENST00000606752 HBQ1P09105 142 aa20.09■□□□□ 0.81
USP6NL-204ENST00000606752 RHAGQ02094 409 aa20.09■□□□□ 0.81
USP6NL-204ENST00000606752 ZNHIT3Q15649 155 aaPredicted RBP20.09■□□□□ 0.81
USP6NL-204ENST00000606752 SLC36A3Q495N2 470 aa20.09■□□□□ 0.81
USP6NL-204ENST00000606752 DCST2Q5T1A1 773 aa20.09■□□□□ 0.81
USP6NL-204ENST00000606752 B3GNT8Q7Z7M8 397 aa20.09■□□□□ 0.81
USP6NL-204ENST00000606752 DHRSXQ8N5I4 330 aa20.09■□□□□ 0.81
USP6NL-204ENST00000606752 AGBL5Q8NDL9 886 aa20.09■□□□□ 0.81
USP6NL-204ENST00000606752 PIK3R3Q92569 461 aa20.09■□□□□ 0.81
USP6NL-204ENST00000606752 TRIM45Q9H8W5 580 aaPredicted RBP20.09■□□□□ 0.81
USP6NL-204ENST00000606752 FOLH1BQ9HBA9 442 aa20.09■□□□□ 0.81
USP6NL-204ENST00000606752 MKLN1Q9UL63 735 aa20.09■□□□□ 0.81
USP6NL-204ENST00000606752 LYVE1Q9Y5Y7 322 aa20.09■□□□□ 0.81
USP6NL-204ENST00000606752 C17orf105B2RV13 164 aa20.08■□□□□ 0.8
USP6NL-204ENST00000606752 J3KTA2 159 aa20.08■□□□□ 0.8
USP6NL-204ENST00000606752 TNFRSF11BO00300 401 aa20.08■□□□□ 0.8
USP6NL-204ENST00000606752 STX11O75558 287 aa20.08■□□□□ 0.8
USP6NL-204ENST00000606752 THRBP10828 461 aa20.08■□□□□ 0.8
USP6NL-204ENST00000606752 POU6F2P78424 691 aaPredicted RBP20.08■□□□□ 0.8
USP6NL-204ENST00000606752 IL11RAQ14626 422 aa20.08■□□□□ 0.8
USP6NL-204ENST00000606752 SF3A2Q15428 464 aaKnown RBP20.08■□□□□ 0.8
USP6NL-204ENST00000606752 ZNF311Q5JNZ3 666 aa20.08■□□□□ 0.8
USP6NL-204ENST00000606752 TYW3Q6IPR3 259 aaKnown RBP20.08■□□□□ 0.8
USP6NL-204ENST00000606752 COX15Q7KZN9 410 aa20.08■□□□□ 0.8
USP6NL-204ENST00000606752 HMGN2P46Q86SG4 172 aa20.08■□□□□ 0.8
USP6NL-204ENST00000606752 ZNF605Q86T29 641 aa20.08■□□□□ 0.8
USP6NL-204ENST00000606752 CHERPQ8IWX8 916 aaKnown RBP20.08■□□□□ 0.8
USP6NL-204ENST00000606752 PTPMT1Q8WUK0 201 aaPredicted RBP20.08■□□□□ 0.8
USP6NL-204ENST00000606752 CLIP3Q96DZ5 547 aa20.08■□□□□ 0.8
USP6NL-204ENST00000606752 BARD1Q99728 777 aaKnown RBP20.08■□□□□ 0.8
USP6NL-204ENST00000606752 ANKRD60Q9BZ19 345 aa20.08■□□□□ 0.8
USP6NL-204ENST00000606752 TGIF2Q9GZN2 237 aa20.08■□□□□ 0.8
USP6NL-204ENST00000606752 ZNF350Q9GZX5 532 aa20.08■□□□□ 0.8
USP6NL-204ENST00000606752 SAP130Q9H0E3 1048 aa20.08■□□□□ 0.8
USP6NL-204ENST00000606752 PNO1Q9NRX1 252 aaKnown RBP20.08■□□□□ 0.8
USP6NL-204ENST00000606752 SLC22A11Q9NSA0 550 aa20.08■□□□□ 0.8
USP6NL-204ENST00000606752 PDP1Q9P0J1 537 aaPredicted RBP20.08■□□□□ 0.8
USP6NL-204ENST00000606752 ERVK-19Q9WJR5 959 aa20.08■□□□□ 0.8
USP6NL-204ENST00000606752 SLC9A8Q9Y2E8 581 aa20.08■□□□□ 0.8
USP6NL-204ENST00000606752 IFT52Q9Y366 437 aa20.08■□□□□ 0.8
USP6NL-204ENST00000606752 EFCAB7A8K855 629 aa20.07■□□□□ 0.8
USP6NL-204ENST00000606752 PRR33A8MZF0 331 aa20.07■□□□□ 0.8
USP6NL-204ENST00000606752 SYT5O00445 386 aa20.07■□□□□ 0.8
USP6NL-204ENST00000606752 FGF5P12034 268 aa20.07■□□□□ 0.8
USP6NL-204ENST00000606752 CD59P13987 128 aa20.07■□□□□ 0.8
USP6NL-204ENST00000606752 RORAP35398 523 aa20.07■□□□□ 0.8
USP6NL-204ENST00000606752 PSG6Q00889 435 aa20.07■□□□□ 0.8
USP6NL-204ENST00000606752 SPIBQ01892 262 aa20.07■□□□□ 0.8
USP6NL-204ENST00000606752 LAPTM4AQ15012 233 aa20.07■□□□□ 0.8
USP6NL-204ENST00000606752 NKAIN1Q4KMZ8 207 aa20.07■□□□□ 0.8
USP6NL-204ENST00000606752 CCNJQ5T5M9 372 aa20.07■□□□□ 0.8
USP6NL-204ENST00000606752 TMEM151BQ8IW70 566 aa20.07■□□□□ 0.8
USP6NL-204ENST00000606752 OR7G1Q8NGA0 311 aa20.07■□□□□ 0.8
USP6NL-204ENST00000606752 OR52P1PQ8NH57 321 aa20.07■□□□□ 0.8
USP6NL-204ENST00000606752 TSLPQ969D9 159 aa20.07■□□□□ 0.8
USP6NL-204ENST00000606752 VSTM2LQ96N03 204 aa20.07■□□□□ 0.8
USP6NL-204ENST00000606752 OR10A5Q9H207 317 aa20.07■□□□□ 0.8
USP6NL-204ENST00000606752 UBAP1Q9NZ09 502 aa20.07■□□□□ 0.8
USP6NL-204ENST00000606752 CCDC88CQ9P219 2028 aa20.07■□□□□ 0.8
USP6NL-204ENST00000606752 IGLV3-12A0A075B6K2 115 aa20.06■□□□□ 0.8
USP6NL-204ENST00000606752 TCRBV16S1A1N1A0A5B0 115 aa20.06■□□□□ 0.8
USP6NL-204ENST00000606752 DYRK3O43781 588 aa20.06■□□□□ 0.8
USP6NL-204ENST00000606752 HS6ST1O60243 411 aa20.06■□□□□ 0.8
USP6NL-204ENST00000606752 EPPINO95925 133 aa20.06■□□□□ 0.8
USP6NL-204ENST00000606752 ALBP02768 609 aa20.06■□□□□ 0.8
USP6NL-204ENST00000606752 PRKAR1BP31321 381 aa20.06■□□□□ 0.8
USP6NL-204ENST00000606752 CAPGP40121 348 aa20.06■□□□□ 0.8
USP6NL-204ENST00000606752 HMGA2P52926 109 aa20.06■□□□□ 0.8
USP6NL-204ENST00000606752 EPS8Q12929 822 aa20.06■□□□□ 0.8
USP6NL-204ENST00000606752 AP1ARQ63HQ0 302 aa20.06■□□□□ 0.8
USP6NL-204ENST00000606752 ANKRD34AQ69YU3 496 aa20.06■□□□□ 0.8
USP6NL-204ENST00000606752 TCTN3Q6NUS6 607 aa20.06■□□□□ 0.8
USP6NL-204ENST00000606752 COMTD1Q86VU5 262 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms