RNA–Protein interactions for RNA: ENST00000592391.5

DDX39A-217, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,080 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-217ENST00000592391 PPP1R36Q96LQ0 422 aa13.31□□□□□ -0.28
DDX39A-217ENST00000592391 JSRP1Q96MG2 331 aaPredicted RBP13.31□□□□□ -0.28
DDX39A-217ENST00000592391 COL21A1Q96P44 957 aa13.31□□□□□ -0.28
DDX39A-217ENST00000592391 METTL7AQ9H8H3 244 aa13.31□□□□□ -0.28
DDX39A-217ENST00000592391 AKTIPQ9H8T0 292 aa13.31□□□□□ -0.28
DDX39A-217ENST00000592391 QPCTLQ9NXS2 382 aa13.31□□□□□ -0.28
DDX39A-217ENST00000592391 ASIC5Q9NY37 505 aa13.31□□□□□ -0.28
DDX39A-217ENST00000592391 NOP53Q9NZM5 478 aaKnown RBP13.31□□□□□ -0.28
DDX39A-217ENST00000592391 B4GALT7Q9UBV7 327 aa13.31□□□□□ -0.28
DDX39A-217ENST00000592391 PLEKHB1Q9UF11 243 aaPredicted RBP13.31□□□□□ -0.28
DDX39A-217ENST00000592391 LIPGQ9Y5X9 500 aa13.31□□□□□ -0.28
DDX39A-217ENST00000592391 EML6Q6ZMW3 1958 aa13.31□□□□□ -0.28
DDX39A-217ENST00000592391 A0A1B0GVC2 190 aa13.3□□□□□ -0.28
DDX39A-217ENST00000592391 A1L4Q6 167 aa13.3□□□□□ -0.28
DDX39A-217ENST00000592391 TSPAN2O60636 221 aa13.3□□□□□ -0.28
DDX39A-217ENST00000592391 SNNO75324 88 aaPredicted RBP13.3□□□□□ -0.28
DDX39A-217ENST00000592391 REM1O75628 298 aa13.3□□□□□ -0.28
DDX39A-217ENST00000592391 TPOP07202 933 aa13.3□□□□□ -0.28
DDX39A-217ENST00000592391 CELA3AP09093 270 aa13.3□□□□□ -0.28
DDX39A-217ENST00000592391 G6PDP11413 515 aa13.3□□□□□ -0.28
DDX39A-217ENST00000592391 PRPS1L1P21108 318 aa13.3□□□□□ -0.28
DDX39A-217ENST00000592391 GPC1P35052 558 aa13.3□□□□□ -0.28
DDX39A-217ENST00000592391 KRT20P35900 424 aa13.3□□□□□ -0.28
DDX39A-217ENST00000592391 SNTA1Q13424 505 aa13.3□□□□□ -0.28
DDX39A-217ENST00000592391 MLC1Q15049 377 aa13.3□□□□□ -0.28
DDX39A-217ENST00000592391 ATG16L1Q676U5 607 aa13.3□□□□□ -0.28
DDX39A-217ENST00000592391 TRILQ7L0X0 811 aa13.3□□□□□ -0.28
DDX39A-217ENST00000592391 TRIM42Q8IWZ5 723 aa13.3□□□□□ -0.28
DDX39A-217ENST00000592391 RIMKLAQ8IXN7 391 aa13.3□□□□□ -0.28
DDX39A-217ENST00000592391 NATD1Q8N6N6 113 aa13.3□□□□□ -0.28
DDX39A-217ENST00000592391 OR7A2PQ8NGA2 310 aa13.3□□□□□ -0.28
DDX39A-217ENST00000592391 TMCO6Q96DC7 493 aa13.3□□□□□ -0.28
DDX39A-217ENST00000592391 TMEM41AQ96HV5 264 aa13.3□□□□□ -0.28
DDX39A-217ENST00000592391 NODALQ96S42 347 aa13.3□□□□□ -0.28
DDX39A-217ENST00000592391 ADOQ96SZ5 270 aa13.3□□□□□ -0.28
DDX39A-217ENST00000592391 NUF2Q9BZD4 464 aa13.3□□□□□ -0.28
DDX39A-217ENST00000592391 PNPOQ9NVS9 261 aa13.3□□□□□ -0.28
DDX39A-217ENST00000592391 THAP1Q9NVV9 213 aa13.3□□□□□ -0.28
DDX39A-217ENST00000592391 ARGLU1Q9NWB6 273 aaPredicted RBP13.3□□□□□ -0.28
DDX39A-217ENST00000592391 NTMQ9P121 344 aa13.3□□□□□ -0.28
DDX39A-217ENST00000592391 OR10H1Q9Y4A9 318 aa13.3□□□□□ -0.28
DDX39A-217ENST00000592391 SPTBN1Q01082 2364 aaKnown RBP13.3□□□□□ -0.28
DDX39A-217ENST00000592391 OR14I1A6ND48 311 aa13.29□□□□□ -0.28
DDX39A-217ENST00000592391 PRAMEF25A6NGN4 478 aa13.29□□□□□ -0.28
DDX39A-217ENST00000592391 TTC36A6NLP5 189 aa13.29□□□□□ -0.28
DDX39A-217ENST00000592391 SUSD5O60279 629 aa13.29□□□□□ -0.28
DDX39A-217ENST00000592391 HCN1O60741 890 aa13.29□□□□□ -0.28
DDX39A-217ENST00000592391 CLDN1O95832 211 aa13.29□□□□□ -0.28
DDX39A-217ENST00000592391 LAMP1P11279 417 aa13.29□□□□□ -0.28
DDX39A-217ENST00000592391 ESRRAP11474 423 aaPredicted RBP13.29□□□□□ -0.28
DDX39A-217ENST00000592391 H2AFXP16104 143 aaPredicted RBP13.29□□□□□ -0.28
DDX39A-217ENST00000592391 IL12BP29460 328 aa13.29□□□□□ -0.28
DDX39A-217ENST00000592391 PTGDSP41222 190 aa13.29□□□□□ -0.28
DDX39A-217ENST00000592391 MASP1P48740 699 aa13.29□□□□□ -0.28
DDX39A-217ENST00000592391 CDK9P50750 372 aaKnown RBP13.29□□□□□ -0.28
DDX39A-217ENST00000592391 PNLIPRP2P54317 469 aa13.29□□□□□ -0.28
DDX39A-217ENST00000592391 CLDN8P56748 225 aa13.29□□□□□ -0.28
DDX39A-217ENST00000592391 C21orf58P58505 322 aa13.29□□□□□ -0.28
DDX39A-217ENST00000592391 EFR3AQ14156 821 aa13.29□□□□□ -0.28
DDX39A-217ENST00000592391 ZNHIT3Q15649 155 aaPredicted RBP13.29□□□□□ -0.28
DDX39A-217ENST00000592391 CYP27C1Q4G0S4 372 aa13.29□□□□□ -0.28
DDX39A-217ENST00000592391 CPTPQ5TA50 214 aa13.29□□□□□ -0.28
DDX39A-217ENST00000592391 FNDC7Q5VTL7 733 aa13.29□□□□□ -0.28
DDX39A-217ENST00000592391 SLC30A6Q6NXT4 461 aa13.29□□□□□ -0.28
DDX39A-217ENST00000592391 RPTNQ6XPR3 784 aa13.29□□□□□ -0.28
DDX39A-217ENST00000592391 LARP4Q71RC2 724 aaKnown RBP eCLIP13.29□□□□□ -0.28
DDX39A-217ENST00000592391 MAMDC2Q7Z304 686 aaPredicted RBP13.29□□□□□ -0.28
DDX39A-217ENST00000592391 CD163Q86VB7 1156 aa13.29□□□□□ -0.28
DDX39A-217ENST00000592391 LRRC34Q8IZ02 419 aa13.29□□□□□ -0.28
DDX39A-217ENST00000592391 EID3Q8N140 333 aa13.29□□□□□ -0.28
DDX39A-217ENST00000592391 KRTCAP2Q8N6L1 136 aa13.29□□□□□ -0.28
DDX39A-217ENST00000592391 OR4N2Q8NGD1 307 aa13.29□□□□□ -0.28
DDX39A-217ENST00000592391 CEP70Q8NHQ1 597 aa13.29□□□□□ -0.28
DDX39A-217ENST00000592391 COQ8BQ96D53 544 aa13.29□□□□□ -0.28
DDX39A-217ENST00000592391 ATP6V1G3Q96LB4 118 aa13.29□□□□□ -0.28
DDX39A-217ENST00000592391 PHF12Q96QT6 1004 aa13.29□□□□□ -0.28
DDX39A-217ENST00000592391 PRPF18Q99633 342 aaKnown RBP13.29□□□□□ -0.28
DDX39A-217ENST00000592391 LMF2Q9BU23 707 aaKnown RBP13.29□□□□□ -0.28
DDX39A-217ENST00000592391 OSBPL11Q9BXB4 747 aa13.29□□□□□ -0.28
DDX39A-217ENST00000592391 LDAHQ9H6V9 325 aa13.29□□□□□ -0.28
DDX39A-217ENST00000592391 MEAF6Q9HAF1 191 aa13.29□□□□□ -0.28
DDX39A-217ENST00000592391 C3orf14Q9HBI5 128 aa13.29□□□□□ -0.28
DDX39A-217ENST00000592391 Q9N2J8 555 aa13.29□□□□□ -0.28
DDX39A-217ENST00000592391 ACKR4Q9NPB9 350 aa13.29□□□□□ -0.28
DDX39A-217ENST00000592391 ATAD3AQ9NVI7 634 aa13.29□□□□□ -0.28
DDX39A-217ENST00000592391 KLRF1Q9NZS2 232 aa13.29□□□□□ -0.28
DDX39A-217ENST00000592391 C15orf41Q9Y2V0 281 aa13.29□□□□□ -0.28
DDX39A-217ENST00000592391 MEMO1Q9Y316 297 aa13.29□□□□□ -0.28
DDX39A-217ENST00000592391 DIDO1Q9BTC0 2240 aaKnown RBP13.29□□□□□ -0.28
DDX39A-217ENST00000592391 ICE1Q9Y2F5 2266 aa13.29□□□□□ -0.28
DDX39A-217ENST00000592391 EXPH5Q8NEV8 1989 aa13.29□□□□□ -0.28
DDX39A-217ENST00000592391 TRGV5A0A0B4J1U4 118 aa13.28□□□□□ -0.28
DDX39A-217ENST00000592391 A0A1W2PRB8 838 aa13.28□□□□□ -0.28
DDX39A-217ENST00000592391 NPIPA2E9PIF3 369 aa13.28□□□□□ -0.28
DDX39A-217ENST00000592391 E9PLN8 166 aa13.28□□□□□ -0.28
DDX39A-217ENST00000592391 NPIPA3F8WFD2 350 aa13.28□□□□□ -0.28
DDX39A-217ENST00000592391 AQP7O14520 342 aa13.28□□□□□ -0.28
DDX39A-217ENST00000592391 ADAM10O14672 748 aa13.28□□□□□ -0.28
DDX39A-217ENST00000592391 BCKDKO14874 412 aa13.28□□□□□ -0.28
DDX39A-217ENST00000592391 ICOSLGO75144 302 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms