RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 CASP3P42574 277 aa13.59□□□□□ -0.23
ATG4D-207ENST00000587256 SLC18A1P54219 525 aa13.59□□□□□ -0.23
ATG4D-207ENST00000587256 MANFP55145 182 aaKnown RBP13.59□□□□□ -0.23
ATG4D-207ENST00000587256 CT45A2Q5DJT8 189 aa13.59□□□□□ -0.23
ATG4D-207ENST00000587256 C3P1Q6ZMU1 363 aa13.59□□□□□ -0.23
ATG4D-207ENST00000587256 LARP4Q71RC2 724 aaKnown RBP eCLIP13.59□□□□□ -0.23
ATG4D-207ENST00000587256 NUP54Q7Z3B4 507 aa13.59□□□□□ -0.23
ATG4D-207ENST00000587256 EID3Q8N140 333 aa13.59□□□□□ -0.23
ATG4D-207ENST00000587256 HGDQ93099 445 aa13.59□□□□□ -0.23
ATG4D-207ENST00000587256 ELP4Q96EB1 424 aa13.59□□□□□ -0.23
ATG4D-207ENST00000587256 ANGPTL4Q9BY76 406 aa13.59□□□□□ -0.23
ATG4D-207ENST00000587256 NUF2Q9BZD4 464 aa13.59□□□□□ -0.23
ATG4D-207ENST00000587256 PROK2Q9HC23 129 aa13.59□□□□□ -0.23
ATG4D-207ENST00000587256 EQTNQ9NQ60 294 aa13.59□□□□□ -0.23
ATG4D-207ENST00000587256 ACSS1Q9NUB1 689 aaPredicted RBP13.59□□□□□ -0.23
ATG4D-207ENST00000587256 ATAD3AQ9NVI7 634 aa13.59□□□□□ -0.23
ATG4D-207ENST00000587256 NOP53Q9NZM5 478 aaKnown RBP13.59□□□□□ -0.23
ATG4D-207ENST00000587256 ATP6V1HQ9UI12 483 aa13.59□□□□□ -0.23
ATG4D-207ENST00000587256 ICE1Q9Y2F5 2266 aa13.59□□□□□ -0.23
ATG4D-207ENST00000587256 OR6C70A6NIJ9 312 aa13.58□□□□□ -0.24
ATG4D-207ENST00000587256 NPIPA2E9PIF3 369 aa13.58□□□□□ -0.24
ATG4D-207ENST00000587256 NPIPA3F8WFD2 350 aa13.58□□□□□ -0.24
ATG4D-207ENST00000587256 TRIM3O75382 744 aaPredicted RBP13.58□□□□□ -0.24
ATG4D-207ENST00000587256 PSMG1O95456 288 aa13.58□□□□□ -0.24
ATG4D-207ENST00000587256 IGHG3P01860 377 aa13.58□□□□□ -0.24
ATG4D-207ENST00000587256 IFI6P09912 130 aa13.58□□□□□ -0.24
ATG4D-207ENST00000587256 RFPL3SP0C7P2 107 aa13.58□□□□□ -0.24
ATG4D-207ENST00000587256 MAN2A2P49641 1150 aa13.58□□□□□ -0.24
ATG4D-207ENST00000587256 CDK9P50750 372 aaKnown RBP13.58□□□□□ -0.24
ATG4D-207ENST00000587256 EFR3AQ14156 821 aa13.58□□□□□ -0.24
ATG4D-207ENST00000587256 SLC10A1Q14973 349 aa13.58□□□□□ -0.24
ATG4D-207ENST00000587256 CPTPQ5TA50 214 aa13.58□□□□□ -0.24
ATG4D-207ENST00000587256 AGBL2Q5U5Z8 902 aa13.58□□□□□ -0.24
ATG4D-207ENST00000587256 ATG16L1Q676U5 607 aa13.58□□□□□ -0.24
ATG4D-207ENST00000587256 DESI1Q6ICB0 168 aa13.58□□□□□ -0.24
ATG4D-207ENST00000587256 MAMDC2Q7Z304 686 aaPredicted RBP13.58□□□□□ -0.24
ATG4D-207ENST00000587256 WDR53Q7Z5U6 358 aaPredicted RBP13.58□□□□□ -0.24
ATG4D-207ENST00000587256 DOLPP1Q86YN1 238 aa13.58□□□□□ -0.24
ATG4D-207ENST00000587256 TRIM42Q8IWZ5 723 aa13.58□□□□□ -0.24
ATG4D-207ENST00000587256 GOLGA6L1Q8N7Z2 621 aa13.58□□□□□ -0.24
ATG4D-207ENST00000587256 OR7A2PQ8NGA2 310 aa13.58□□□□□ -0.24
ATG4D-207ENST00000587256 EFHD2Q96C19 240 aaPredicted RBP13.58□□□□□ -0.24
ATG4D-207ENST00000587256 TMCO6Q96DC7 493 aa13.58□□□□□ -0.24
ATG4D-207ENST00000587256 SLC35A4Q96G79 324 aa13.58□□□□□ -0.24
ATG4D-207ENST00000587256 NODALQ96S42 347 aa13.58□□□□□ -0.24
ATG4D-207ENST00000587256 ADOQ96SZ5 270 aa13.58□□□□□ -0.24
ATG4D-207ENST00000587256 PRPF18Q99633 342 aaKnown RBP13.58□□□□□ -0.24
ATG4D-207ENST00000587256 AKTIPQ9H8T0 292 aa13.58□□□□□ -0.24
ATG4D-207ENST00000587256 Q9N2J8 555 aa13.58□□□□□ -0.24
ATG4D-207ENST00000587256 PNPOQ9NVS9 261 aa13.58□□□□□ -0.24
ATG4D-207ENST00000587256 HAO1Q9UJM8 370 aa13.58□□□□□ -0.24
ATG4D-207ENST00000587256 MEMO1Q9Y316 297 aa13.58□□□□□ -0.24
ATG4D-207ENST00000587256 EML6Q6ZMW3 1958 aa13.58□□□□□ -0.24
ATG4D-207ENST00000587256 TRGV5A0A0B4J1U4 118 aa13.57□□□□□ -0.24
ATG4D-207ENST00000587256 GNB5O14775 395 aa13.57□□□□□ -0.24
ATG4D-207ENST00000587256 G6PDP11413 515 aa13.57□□□□□ -0.24
ATG4D-207ENST00000587256 PRPS1L1P21108 318 aa13.57□□□□□ -0.24
ATG4D-207ENST00000587256 ELAVL4P26378 380 aaKnown RBP13.57□□□□□ -0.24
ATG4D-207ENST00000587256 FRKP42685 505 aaPredicted RBP13.57□□□□□ -0.24
ATG4D-207ENST00000587256 RFX3P48380 749 aa13.57□□□□□ -0.24
ATG4D-207ENST00000587256 PRKAG1P54619 331 aa13.57□□□□□ -0.24
ATG4D-207ENST00000587256 MRPS22P82650 360 aaKnown RBP13.57□□□□□ -0.24
ATG4D-207ENST00000587256 PSG6Q00889 435 aa13.57□□□□□ -0.24
ATG4D-207ENST00000587256 EMX2Q04743 252 aa13.57□□□□□ -0.24
ATG4D-207ENST00000587256 SMU1Q2TAY7 513 aa13.57□□□□□ -0.24
ATG4D-207ENST00000587256 SLC30A6Q6NXT4 461 aa13.57□□□□□ -0.24
ATG4D-207ENST00000587256 ANGPTL8Q6UXH0 198 aa13.57□□□□□ -0.24
ATG4D-207ENST00000587256 RPTNQ6XPR3 784 aa13.57□□□□□ -0.24
ATG4D-207ENST00000587256 TRILQ7L0X0 811 aa13.57□□□□□ -0.24
ATG4D-207ENST00000587256 KRTCAP2Q8N6L1 136 aa13.57□□□□□ -0.24
ATG4D-207ENST00000587256 OR4N2Q8NGD1 307 aa13.57□□□□□ -0.24
ATG4D-207ENST00000587256 FBXO30Q8TB52 745 aa13.57□□□□□ -0.24
ATG4D-207ENST00000587256 RAB3IL1Q8TBN0 382 aa13.57□□□□□ -0.24
ATG4D-207ENST00000587256 ARL8AQ96BM9 186 aa13.57□□□□□ -0.24
ATG4D-207ENST00000587256 TMEM41AQ96HV5 264 aa13.57□□□□□ -0.24
ATG4D-207ENST00000587256 MS4A4EQ96PG1 132 aa13.57□□□□□ -0.24
ATG4D-207ENST00000587256 SLC6A15Q9H2J7 730 aa13.57□□□□□ -0.24
ATG4D-207ENST00000587256 TP63Q9H3D4 680 aaPredicted RBP13.57□□□□□ -0.24
ATG4D-207ENST00000587256 C3orf14Q9HBI5 128 aa13.57□□□□□ -0.24
ATG4D-207ENST00000587256 GALNT9Q9HCQ5 603 aa13.57□□□□□ -0.24
ATG4D-207ENST00000587256 THAP1Q9NVV9 213 aa13.57□□□□□ -0.24
ATG4D-207ENST00000587256 QPCTLQ9NXS2 382 aa13.57□□□□□ -0.24
ATG4D-207ENST00000587256 ASIC5Q9NY37 505 aa13.57□□□□□ -0.24
ATG4D-207ENST00000587256 MARCOQ9UEW3 520 aaPredicted RBP13.57□□□□□ -0.24
ATG4D-207ENST00000587256 C15orf41Q9Y2V0 281 aa13.57□□□□□ -0.24
ATG4D-207ENST00000587256 UTP20O75691 2785 aaKnown RBP13.57□□□□□ -0.24
ATG4D-207ENST00000587256 A0A1W2PRB8 838 aa13.56□□□□□ -0.24
ATG4D-207ENST00000587256 OR14I1A6ND48 311 aa13.56□□□□□ -0.24
ATG4D-207ENST00000587256 E9PLN8 166 aa13.56□□□□□ -0.24
ATG4D-207ENST00000587256 AQP7O14520 342 aa13.56□□□□□ -0.24
ATG4D-207ENST00000587256 BCKDKO14874 412 aa13.56□□□□□ -0.24
ATG4D-207ENST00000587256 SUSD5O60279 629 aa13.56□□□□□ -0.24
ATG4D-207ENST00000587256 TSPAN2O60636 221 aa13.56□□□□□ -0.24
ATG4D-207ENST00000587256 HCN1O60741 890 aa13.56□□□□□ -0.24
ATG4D-207ENST00000587256 TRAPPC6AO75865 159 aa13.56□□□□□ -0.24
ATG4D-207ENST00000587256 CLDN1O95832 211 aa13.56□□□□□ -0.24
ATG4D-207ENST00000587256 LAMP1P11279 417 aa13.56□□□□□ -0.24
ATG4D-207ENST00000587256 TRPC1P48995 793 aa13.56□□□□□ -0.24
ATG4D-207ENST00000587256 SMSP52788 366 aa13.56□□□□□ -0.24
ATG4D-207ENST00000587256 PRR5P85299 388 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms