RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 COX6B1P14854 86 aa15.21■□□□□ 0.03
CDT1-202ENST00000562747 MANFP55145 182 aaKnown RBP15.21■□□□□ 0.03
CDT1-202ENST00000562747 FBXW4P57775 412 aa15.21■□□□□ 0.03
CDT1-202ENST00000562747 C21orf58P58505 322 aa15.21■□□□□ 0.03
CDT1-202ENST00000562747 OCRLQ01968 901 aa15.21■□□□□ 0.03
CDT1-202ENST00000562747 PLGLB1Q02325 96 aa15.21■□□□□ 0.03
CDT1-202ENST00000562747 PLCXD2Q0VAA5 305 aa15.21■□□□□ 0.03
CDT1-202ENST00000562747 MLC1Q15049 377 aa15.21■□□□□ 0.03
CDT1-202ENST00000562747 NNATQ16517 81 aa15.21■□□□□ 0.03
CDT1-202ENST00000562747 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.21■□□□□ 0.034e-6■□□□□ 10.9
CDT1-202ENST00000562747 TMEM64Q6YI46 380 aa15.21■□□□□ 0.03
CDT1-202ENST00000562747 SLC22A16Q86VW1 577 aa15.21■□□□□ 0.03
CDT1-202ENST00000562747 ZNF295-AS1Q8N0V1 137 aa15.21■□□□□ 0.03
CDT1-202ENST00000562747 GHDCQ8N2G8 530 aa15.21■□□□□ 0.03
CDT1-202ENST00000562747 PRPF18Q99633 342 aaKnown RBP15.21■□□□□ 0.03
CDT1-202ENST00000562747 TSPAN10Q9H1Z9 355 aaPredicted RBP15.21■□□□□ 0.03
CDT1-202ENST00000562747 RUBCNLQ9H714 662 aa15.21■□□□□ 0.03
CDT1-202ENST00000562747 IL1RL2Q9HB29 575 aa15.21■□□□□ 0.03
CDT1-202ENST00000562747 ATAD3AQ9NVI7 634 aa15.21■□□□□ 0.03
CDT1-202ENST00000562747 CNOT11Q9UKZ1 510 aaKnown RBP15.21■□□□□ 0.03
CDT1-202ENST00000562747 TRPC5OSA6NMA1 111 aa15.2■□□□□ 0.02
CDT1-202ENST00000562747 G3V3Y1 287 aa15.2■□□□□ 0.02
CDT1-202ENST00000562747 HDAC3O15379 428 aa15.2■□□□□ 0.02
CDT1-202ENST00000562747 HS6ST1O60243 411 aa15.2■□□□□ 0.02
CDT1-202ENST00000562747 GLSO94925 669 aaPredicted RBP15.2■□□□□ 0.02
CDT1-202ENST00000562747 ABCB1P08183 1280 aaPredicted RBP15.2■□□□□ 0.02
CDT1-202ENST00000562747 CT45A8P0DMV1 189 aa15.2■□□□□ 0.02
CDT1-202ENST00000562747 CT45A9P0DMV2 189 aa15.2■□□□□ 0.02
CDT1-202ENST00000562747 G6PDP11413 515 aa15.2■□□□□ 0.02
CDT1-202ENST00000562747 GPC1P35052 558 aa15.2■□□□□ 0.02
CDT1-202ENST00000562747 PIGAP37287 484 aa15.2■□□□□ 0.02
CDT1-202ENST00000562747 RFC3P40938 356 aa15.2■□□□□ 0.02
CDT1-202ENST00000562747 DNASE1L1P49184 302 aa15.2■□□□□ 0.02
CDT1-202ENST00000562747 CLDN8P56748 225 aa15.2■□□□□ 0.02
CDT1-202ENST00000562747 FOXO1Q12778 655 aa15.2■□□□□ 0.02
CDT1-202ENST00000562747 HSPB3Q12988 150 aa15.2■□□□□ 0.02
CDT1-202ENST00000562747 C3AR1Q16581 482 aa15.2■□□□□ 0.02
CDT1-202ENST00000562747 HYAL4Q2M3T9 481 aa15.2■□□□□ 0.02
CDT1-202ENST00000562747 CT45A2Q5DJT8 189 aa15.2■□□□□ 0.02
CDT1-202ENST00000562747 PRAMEF20Q5VT98 475 aa15.2■□□□□ 0.02
CDT1-202ENST00000562747 TMEM81Q6P7N7 255 aa15.2■□□□□ 0.02
CDT1-202ENST00000562747 RPTNQ6XPR3 784 aa15.2■□□□□ 0.02
CDT1-202ENST00000562747 LARP4Q71RC2 724 aaKnown RBP eCLIP15.2■□□□□ 0.02
CDT1-202ENST00000562747 ZNF551Q7Z340 670 aaPredicted RBP15.2■□□□□ 0.02
CDT1-202ENST00000562747 NUP54Q7Z3B4 507 aa15.2■□□□□ 0.02
CDT1-202ENST00000562747 RIMKLAQ8IXN7 391 aa15.2■□□□□ 0.02
CDT1-202ENST00000562747 PRR22Q8IZ63 422 aa15.2■□□□□ 0.02
CDT1-202ENST00000562747 OR7A2PQ8NGA2 310 aa15.2■□□□□ 0.02
CDT1-202ENST00000562747 OR5M3Q8NGP4 307 aa15.2■□□□□ 0.02
CDT1-202ENST00000562747 SPPL2AQ8TCT8 520 aa15.2■□□□□ 0.02
CDT1-202ENST00000562747 ZNF75CPQ92670 426 aaPredicted RBP15.2■□□□□ 0.02
CDT1-202ENST00000562747 DIO2Q92813 273 aa15.2■□□□□ 0.02
CDT1-202ENST00000562747 COQ8BQ96D53 544 aa15.2■□□□□ 0.02
CDT1-202ENST00000562747 OMA1Q96E52 524 aa15.2■□□□□ 0.02
CDT1-202ENST00000562747 TTTY12Q9BZ98 90 aa15.2■□□□□ 0.02
CDT1-202ENST00000562747 TINAGQ9UJW2 476 aa15.2■□□□□ 0.02
CDT1-202ENST00000562747 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.2■□□□□ 0.02
CDT1-202ENST00000562747 CCDC168Q8NDH2 2452 aa15.2■□□□□ 0.02
CDT1-202ENST00000562747 EML6Q6ZMW3 1958 aa15.2■□□□□ 0.02
CDT1-202ENST00000562747 EXPH5Q8NEV8 1989 aa15.2■□□□□ 0.02
CDT1-202ENST00000562747 PCNX1Q96RV3 2341 aa15.2■□□□□ 0.02
CDT1-202ENST00000562747 TTC36A6NLP5 189 aa15.19■□□□□ 0.02
CDT1-202ENST00000562747 SLC19A2O60779 497 aa15.19■□□□□ 0.02
CDT1-202ENST00000562747 LBPP18428 481 aa15.19■□□□□ 0.02
CDT1-202ENST00000562747 PPIAP62937 165 aaKnown RBP15.19■□□□□ 0.02
CDT1-202ENST00000562747 KCNJ2P63252 427 aa15.19■□□□□ 0.02
CDT1-202ENST00000562747 PSG6Q00889 435 aa15.19■□□□□ 0.02
CDT1-202ENST00000562747 ZNF155Q12901 538 aaPredicted RBP15.19■□□□□ 0.02
CDT1-202ENST00000562747 CPTPQ5TA50 214 aa15.19■□□□□ 0.02
CDT1-202ENST00000562747 OGFOD2Q6N063 350 aa15.19■□□□□ 0.02
CDT1-202ENST00000562747 NCCRP1Q6ZVX7 275 aaPredicted RBP15.19■□□□□ 0.02
CDT1-202ENST00000562747 CAMKMTQ7Z624 323 aa15.19■□□□□ 0.02
CDT1-202ENST00000562747 KRTCAP2Q8N6L1 136 aa15.19■□□□□ 0.02
CDT1-202ENST00000562747 HGDQ93099 445 aa15.19■□□□□ 0.02
CDT1-202ENST00000562747 BHLHE41Q9C0J9 482 aaPredicted RBP15.19■□□□□ 0.02
CDT1-202ENST00000562747 ZDHHC11Q9H8X9 412 aa15.19■□□□□ 0.02
CDT1-202ENST00000562747 PROK2Q9HC23 129 aa15.19■□□□□ 0.02
CDT1-202ENST00000562747 CHST11Q9NPF2 352 aa15.19■□□□□ 0.02
CDT1-202ENST00000562747 TUBA8Q9NY65 449 aaPredicted RBP15.19■□□□□ 0.02
CDT1-202ENST00000562747 NTMQ9P121 344 aa15.19■□□□□ 0.02
CDT1-202ENST00000562747 BOKQ9UMX3 212 aaPredicted RBP15.19■□□□□ 0.02
CDT1-202ENST00000562747 CACNA1CQ13936 2221 aa15.19■□□□□ 0.02
CDT1-202ENST00000562747 A0A1W2PRB8 838 aa15.18■□□□□ 0.02
CDT1-202ENST00000562747 OR6C70A6NIJ9 312 aa15.18■□□□□ 0.02
CDT1-202ENST00000562747 SDHDO14521 159 aa15.18■□□□□ 0.02
CDT1-202ENST00000562747 ABCB7O75027 752 aa15.18■□□□□ 0.02
CDT1-202ENST00000562747 SASH3O75995 380 aa15.18■□□□□ 0.02
CDT1-202ENST00000562747 SNX4O95219 450 aa15.18■□□□□ 0.02
CDT1-202ENST00000562747 KITP10721 976 aa15.18■□□□□ 0.02
CDT1-202ENST00000562747 LAMP1P11279 417 aa15.18■□□□□ 0.02
CDT1-202ENST00000562747 DIO3P55073 304 aa15.18■□□□□ 0.02
CDT1-202ENST00000562747 CORO7P57737 925 aa15.18■□□□□ 0.02
CDT1-202ENST00000562747 KRTAP10-9P60411 292 aa15.18■□□□□ 0.02
CDT1-202ENST00000562747 PPP2R2AP63151 447 aa15.18■□□□□ 0.02
CDT1-202ENST00000562747 ZNHIT3Q15649 155 aaPredicted RBP15.18■□□□□ 0.02
CDT1-202ENST00000562747 CMPK2Q5EBM0 449 aa15.18■□□□□ 0.02
CDT1-202ENST00000562747 MTFR2Q6P444 385 aa15.18■□□□□ 0.02
CDT1-202ENST00000562747 PAOXQ6QHF9 649 aa15.18■□□□□ 0.02
CDT1-202ENST00000562747 NPSR1Q6W5P4 371 aa15.18■□□□□ 0.02
CDT1-202ENST00000562747 WDR75Q8IWA0 830 aaKnown RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms