RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 GET4Q7L5D6 327 aaPredicted RBP11.65□□□□□ -0.54
HDAC7-230ENST00000552960 RRM2BQ7LG56 351 aa11.65□□□□□ -0.54
HDAC7-230ENST00000552960 CDH24Q86UP0 819 aa11.65□□□□□ -0.54
HDAC7-230ENST00000552960 OR4M2Q8NGB6 313 aa11.65□□□□□ -0.54
HDAC7-230ENST00000552960 ZNF431Q8TF32 576 aaPredicted RBP11.65□□□□□ -0.54
HDAC7-230ENST00000552960 MSANTD3Q96H12 275 aa11.65□□□□□ -0.54
HDAC7-230ENST00000552960 QRSL1Q9H0R6 528 aaKnown RBP11.65□□□□□ -0.54
HDAC7-230ENST00000552960 FZD3Q9NPG1 666 aa11.65□□□□□ -0.54
HDAC7-230ENST00000552960 ATP13A2Q9NQ11 1180 aa11.65□□□□□ -0.54
HDAC7-230ENST00000552960 SLAMF7Q9NQ25 335 aa11.65□□□□□ -0.54
HDAC7-230ENST00000552960 EVA1BQ9NVM1 165 aa11.65□□□□□ -0.54
HDAC7-230ENST00000552960 FBXW2Q9UKT8 454 aa11.65□□□□□ -0.54
HDAC7-230ENST00000552960 DSPPQ9NZW4 1301 aa11.65□□□□□ -0.55
HDAC7-230ENST00000552960 HELZP42694 1942 aaKnown RBP11.64□□□□□ -0.55
HDAC7-230ENST00000552960 PRRT4C9JH25 899 aa11.64□□□□□ -0.55
HDAC7-230ENST00000552960 HRO43593 1189 aa11.64□□□□□ -0.55
HDAC7-230ENST00000552960 ATG13O75143 517 aa11.64□□□□□ -0.55
HDAC7-230ENST00000552960 SLCO2B1O94956 709 aa11.64□□□□□ -0.55
HDAC7-230ENST00000552960 PAHP00439 452 aa11.64□□□□□ -0.55
HDAC7-230ENST00000552960 SYPP08247 313 aa11.64□□□□□ -0.55
HDAC7-230ENST00000552960 UQCRC2P22695 453 aa11.64□□□□□ -0.55
HDAC7-230ENST00000552960 KCNC3Q14003 757 aa11.64□□□□□ -0.55
HDAC7-230ENST00000552960 POU4F3Q15319 338 aa11.64□□□□□ -0.55
HDAC7-230ENST00000552960 GOT1L1Q8NHS2 421 aaPredicted RBP11.64□□□□□ -0.55
HDAC7-230ENST00000552960 CDCP1Q9H5V8 836 aa11.64□□□□□ -0.55
HDAC7-230ENST00000552960 PTGFRNQ9P2B2 879 aa11.64□□□□□ -0.55
HDAC7-230ENST00000552960 MGAT4AQ9UM21 535 aa11.64□□□□□ -0.55
HDAC7-230ENST00000552960 HS3ST2Q9Y278 367 aa11.64□□□□□ -0.55
HDAC7-230ENST00000552960 SERTM1A2A2V5 107 aa11.64□□□□□ -0.55
HDAC7-230ENST00000552960 LEFTY1O75610 366 aa11.64□□□□□ -0.55
HDAC7-230ENST00000552960 C1GALT1C1LP0DN25 315 aa11.64□□□□□ -0.55
HDAC7-230ENST00000552960 SSTR2P30874 369 aa11.64□□□□□ -0.55
HDAC7-230ENST00000552960 C21orf58P58505 322 aa11.64□□□□□ -0.55
HDAC7-230ENST00000552960 KLHL22Q53GT1 634 aa11.64□□□□□ -0.55
HDAC7-230ENST00000552960 ARSIQ5FYB1 569 aa11.64□□□□□ -0.55
HDAC7-230ENST00000552960 TOR2AQ5JU69 321 aa11.64□□□□□ -0.55
HDAC7-230ENST00000552960 FGF13Q92913 245 aa11.64□□□□□ -0.55
HDAC7-230ENST00000552960 MRGPRX3Q96LB0 322 aa11.64□□□□□ -0.55
HDAC7-230ENST00000552960 ABCG5Q9H222 651 aa11.64□□□□□ -0.55
HDAC7-230ENST00000552960 SLC28A3Q9HAS3 691 aa11.64□□□□□ -0.55
HDAC7-230ENST00000552960 NCKAP1Q9Y2A7 1128 aa11.64□□□□□ -0.55
HDAC7-230ENST00000552960 AP1M2Q9Y6Q5 423 aa11.64□□□□□ -0.55
HDAC7-230ENST00000552960 DMDP11532 3685 aa11.64□□□□□ -0.55
HDAC7-230ENST00000552960 SHISA3A0PJX4 238 aa11.64□□□□□ -0.55
HDAC7-230ENST00000552960 GLOD5A6NK44 160 aa11.64□□□□□ -0.55
HDAC7-230ENST00000552960 LEUTXA8MZ59 168 aa11.64□□□□□ -0.55
HDAC7-230ENST00000552960 SCAMP1O15126 338 aa11.64□□□□□ -0.55
HDAC7-230ENST00000552960 HCN1O60741 890 aa11.64□□□□□ -0.55
HDAC7-230ENST00000552960 ZNF250P15622 560 aa11.64□□□□□ -0.55
HDAC7-230ENST00000552960 WASP42768 502 aa11.64□□□□□ -0.55
HDAC7-230ENST00000552960 PCDH1Q08174 1060 aa11.64□□□□□ -0.55
HDAC7-230ENST00000552960 C19orf57Q0VDD7 668 aa11.64□□□□□ -0.55
HDAC7-230ENST00000552960 TMEM115Q12893 351 aaPredicted RBP11.64□□□□□ -0.55
HDAC7-230ENST00000552960 FGFBP1Q14512 234 aa11.64□□□□□ -0.55
HDAC7-230ENST00000552960 ESCO2Q56NI9 601 aa11.64□□□□□ -0.55
HDAC7-230ENST00000552960 ZNF767PQ75MW2 155 aa11.64□□□□□ -0.55
HDAC7-230ENST00000552960 LRRC17Q8N6Y2 441 aa11.64□□□□□ -0.55
HDAC7-230ENST00000552960 ANKK1Q8NFD2 765 aa11.64□□□□□ -0.55
HDAC7-230ENST00000552960 TEX47Q8TBZ9 253 aa11.64□□□□□ -0.55
HDAC7-230ENST00000552960 PDXPQ96GD0 296 aa11.64□□□□□ -0.55
HDAC7-230ENST00000552960 F2RL3Q96RI0 385 aa11.64□□□□□ -0.55
HDAC7-230ENST00000552960 ZNF607Q96SK3 696 aa11.64□□□□□ -0.55
HDAC7-230ENST00000552960 TREX2Q9BQ50 279 aaPredicted RBP11.64□□□□□ -0.55
HDAC7-230ENST00000552960 NIPAL2Q9H841 368 aa11.64□□□□□ -0.55
HDAC7-230ENST00000552960 ZNF224Q9NZL3 707 aa11.64□□□□□ -0.55
HDAC7-230ENST00000552960 KCND3Q9UK17 655 aa11.64□□□□□ -0.55
HDAC7-230ENST00000552960 ZFR2Q9UPR6 939 aaKnown RBP11.64□□□□□ -0.55
HDAC7-230ENST00000552960 PLXND1Q9Y4D7 1925 aa11.63□□□□□ -0.55
HDAC7-230ENST00000552960 LOC105369274A0A096LPK9 316 aa11.63□□□□□ -0.55
HDAC7-230ENST00000552960 TOXO94900 526 aa11.63□□□□□ -0.55
HDAC7-230ENST00000552960 POP4O95707 220 aaKnown RBP11.63□□□□□ -0.55
HDAC7-230ENST00000552960 SLC30A6Q6NXT4 461 aa11.63□□□□□ -0.55
HDAC7-230ENST00000552960 GLRX5Q86SX6 157 aa11.63□□□□□ -0.55
HDAC7-230ENST00000552960 COMTD1Q86VU5 262 aa11.63□□□□□ -0.55
HDAC7-230ENST00000552960 OR4N4Q8N0Y3 316 aa11.63□□□□□ -0.55
HDAC7-230ENST00000552960 BEST4Q8NFU0 473 aa11.63□□□□□ -0.55
HDAC7-230ENST00000552960 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.63□□□□□ -0.55
HDAC7-230ENST00000552960 UCN3Q969E3 161 aa11.63□□□□□ -0.55
HDAC7-230ENST00000552960 SENP5Q96HI0 755 aaPredicted RBP11.63□□□□□ -0.55
HDAC7-230ENST00000552960 ZNF354BQ96LW1 612 aa11.63□□□□□ -0.55
HDAC7-230ENST00000552960 LYSMD1Q96S90 227 aa11.63□□□□□ -0.55
HDAC7-230ENST00000552960 TMEM43Q9BTV4 400 aa11.63□□□□□ -0.55
HDAC7-230ENST00000552960 PPP1R3EQ9H7J1 279 aa11.63□□□□□ -0.55
HDAC7-230ENST00000552960 NUDT15Q9NV35 164 aa11.63□□□□□ -0.55
HDAC7-230ENST00000552960 RABL2AQ9UBK7 228 aaPredicted RBP11.63□□□□□ -0.55
HDAC7-230ENST00000552960 SCN8AQ9UQD0 1980 aa11.63□□□□□ -0.55
HDAC7-230ENST00000552960 EEF1E1O43324 174 aaKnown RBP11.63□□□□□ -0.55
HDAC7-230ENST00000552960 LANCL1O43813 399 aa11.63□□□□□ -0.55
HDAC7-230ENST00000552960 LGI1O95970 557 aa11.63□□□□□ -0.55
HDAC7-230ENST00000552960 SRP9P49458 86 aaKnown RBP11.63□□□□□ -0.55
HDAC7-230ENST00000552960 EVX1P49640 407 aa11.63□□□□□ -0.55
HDAC7-230ENST00000552960 SMSP52788 366 aa11.63□□□□□ -0.55
HDAC7-230ENST00000552960 CLDN20P56880 219 aa11.63□□□□□ -0.55
HDAC7-230ENST00000552960 TMEM201Q5SNT2 666 aa11.63□□□□□ -0.55
HDAC7-230ENST00000552960 MTFR2Q6P444 385 aa11.63□□□□□ -0.55
HDAC7-230ENST00000552960 FAM92BQ6ZTR7 304 aa11.63□□□□□ -0.55
HDAC7-230ENST00000552960 CREB3L2Q70SY1 520 aa11.63□□□□□ -0.55
HDAC7-230ENST00000552960 KLBQ86Z14 1044 aa11.63□□□□□ -0.55
HDAC7-230ENST00000552960 FAM26EQ8N5C1 309 aa11.63□□□□□ -0.55
HDAC7-230ENST00000552960 FAM181AQ8N9Y4 354 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms