RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 FANCEQ9HB96 536 aa11.49□□□□□ -0.57
CHD7-211ENST00000532149 CLN6Q9NWW5 311 aa11.49□□□□□ -0.57
CHD7-211ENST00000532149 PRODH2Q9UF12 536 aa11.49□□□□□ -0.57
CHD7-211ENST00000532149 GMEB2Q9UKD1 530 aa11.49□□□□□ -0.57
CHD7-211ENST00000532149 CACNA1IQ9P0X4 2223 aa11.49□□□□□ -0.57
CHD7-211ENST00000532149 TMEM131Q92545 1883 aa11.49□□□□□ -0.57
CHD7-211ENST00000532149 GOLGA4Q13439 2230 aaKnown RBP11.48□□□□□ -0.57
CHD7-211ENST00000532149 AGAP5A6NIR3 686 aa11.48□□□□□ -0.57
CHD7-211ENST00000532149 ZAR1LA6NP61 321 aa11.48□□□□□ -0.57
CHD7-211ENST00000532149 CHST10O43529 356 aa11.48□□□□□ -0.57
CHD7-211ENST00000532149 OR10H3O60404 316 aa11.48□□□□□ -0.57
CHD7-211ENST00000532149 PRAMEF2O60811 474 aa11.48□□□□□ -0.57
CHD7-211ENST00000532149 NKX2-2O95096 273 aa11.48□□□□□ -0.57
CHD7-211ENST00000532149 CHRM4P08173 479 aa11.48□□□□□ -0.57
CHD7-211ENST00000532149 CCNYL3P0C7X3 344 aa11.48□□□□□ -0.57
CHD7-211ENST00000532149 C8orf89P0DMQ9 161 aa11.48□□□□□ -0.57
CHD7-211ENST00000532149 PIPP12273 146 aaPredicted RBP11.48□□□□□ -0.57
CHD7-211ENST00000532149 IL7RP16871 459 aa11.48□□□□□ -0.57
CHD7-211ENST00000532149 ENDOUP21128 410 aaKnown RBP11.48□□□□□ -0.57
CHD7-211ENST00000532149 NT5EP21589 574 aa11.48□□□□□ -0.57
CHD7-211ENST00000532149 ELAVL4P26378 380 aaKnown RBP11.48□□□□□ -0.57
CHD7-211ENST00000532149 MAP3K8P41279 467 aa11.48□□□□□ -0.57
CHD7-211ENST00000532149 ARL4DP49703 201 aa11.48□□□□□ -0.57
CHD7-211ENST00000532149 CASP9P55211 416 aa11.48□□□□□ -0.57
CHD7-211ENST00000532149 SIM1P81133 766 aaPredicted RBP11.48□□□□□ -0.57
CHD7-211ENST00000532149 LSAMPQ13449 338 aa11.48□□□□□ -0.57
CHD7-211ENST00000532149 MEP1AQ16819 746 aa11.48□□□□□ -0.57
CHD7-211ENST00000532149 ENTPD8Q5MY95 495 aa11.48□□□□□ -0.57
CHD7-211ENST00000532149 PLA2G2CQ5R387 149 aa11.48□□□□□ -0.57
CHD7-211ENST00000532149 RPL13AP3Q6NVV1 102 aa11.48□□□□□ -0.57
CHD7-211ENST00000532149 C1orf94Q6P1W5 598 aa11.48□□□□□ -0.57
CHD7-211ENST00000532149 PRSS42Q7Z5A4 293 aa11.48□□□□□ -0.57
CHD7-211ENST00000532149 GALNT5Q7Z7M9 940 aa11.48□□□□□ -0.57
CHD7-211ENST00000532149 GRAMD2AQ8IUY3 354 aa11.48□□□□□ -0.57
CHD7-211ENST00000532149 GALNT12Q8IXK2 581 aa11.48□□□□□ -0.57
CHD7-211ENST00000532149 ZNF619Q8N2I2 560 aa11.48□□□□□ -0.57
CHD7-211ENST00000532149 VWA5B2Q8N398 1253 aa11.48□□□□□ -0.57
CHD7-211ENST00000532149 FAM160A2Q8N612 972 aaPredicted RBP11.48□□□□□ -0.57
CHD7-211ENST00000532149 AQP11Q8NBQ7 271 aa11.48□□□□□ -0.57
CHD7-211ENST00000532149 ZNF540Q8NDQ6 660 aa11.48□□□□□ -0.57
CHD7-211ENST00000532149 OR7G2Q8NG99 324 aa11.48□□□□□ -0.57
CHD7-211ENST00000532149 OR5D16Q8NGK9 328 aa11.48□□□□□ -0.57
CHD7-211ENST00000532149 GNPDA2Q8TDQ7 276 aa11.48□□□□□ -0.57
CHD7-211ENST00000532149 RORBQ92753 470 aa11.48□□□□□ -0.57
CHD7-211ENST00000532149 COL26A1Q96A83 441 aa11.48□□□□□ -0.57
CHD7-211ENST00000532149 SLC35A4Q96G79 324 aa11.48□□□□□ -0.57
CHD7-211ENST00000532149 FCRL4Q96PJ5 515 aa11.48□□□□□ -0.57
CHD7-211ENST00000532149 CCNL2Q96S94 520 aaPredicted RBP11.48□□□□□ -0.57
CHD7-211ENST00000532149 SDF2Q99470 211 aa11.48□□□□□ -0.57
CHD7-211ENST00000532149 FUZQ9BT04 418 aa11.48□□□□□ -0.57
CHD7-211ENST00000532149 LMF2Q9BU23 707 aaKnown RBP11.48□□□□□ -0.57
CHD7-211ENST00000532149 ZNF350Q9GZX5 532 aa11.48□□□□□ -0.57
CHD7-211ENST00000532149 HOXD1Q9GZZ0 328 aa11.48□□□□□ -0.57
CHD7-211ENST00000532149 GPN2Q9H9Y4 310 aaPredicted RBP11.48□□□□□ -0.57
CHD7-211ENST00000532149 LRIT1Q9P2V4 623 aa11.48□□□□□ -0.57
CHD7-211ENST00000532149 SERTAD3Q9UJW9 196 aa11.48□□□□□ -0.57
CHD7-211ENST00000532149 MRTO4Q9UKD2 239 aaKnown RBP11.48□□□□□ -0.57
CHD7-211ENST00000532149 A4GNTQ9UNA3 340 aa11.48□□□□□ -0.57
CHD7-211ENST00000532149 PCDHGA6Q9Y5G7 932 aa11.48□□□□□ -0.57
CHD7-211ENST00000532149 CEP192Q8TEP8 1941 aa11.48□□□□□ -0.57
CHD7-211ENST00000532149 MN1Q10571 1320 aaPredicted RBP11.47□□□□□ -0.57
CHD7-211ENST00000532149 PRAMEF27A3QJZ7 478 aa11.47□□□□□ -0.57
CHD7-211ENST00000532149 PRAMEF25A6NGN4 478 aa11.47□□□□□ -0.57
CHD7-211ENST00000532149 TRIM64BA6NI03 449 aa11.47□□□□□ -0.57
CHD7-211ENST00000532149 CLCA1A8K7I4 914 aa11.47□□□□□ -0.57
CHD7-211ENST00000532149 NME6O75414 186 aaPredicted RBP11.47□□□□□ -0.57
CHD7-211ENST00000532149 CYP7B1O75881 506 aa11.47□□□□□ -0.57
CHD7-211ENST00000532149 CELA2BP08218 269 aaPredicted RBP11.47□□□□□ -0.57
CHD7-211ENST00000532149 NID1P14543 1247 aa11.47□□□□□ -0.57
CHD7-211ENST00000532149 RPS4Y1P22090 263 aaKnown RBP11.47□□□□□ -0.57
CHD7-211ENST00000532149 ELK4P28324 431 aa11.47□□□□□ -0.57
CHD7-211ENST00000532149 CNR2P34972 360 aa11.47□□□□□ -0.57
CHD7-211ENST00000532149 CTSKP43235 329 aa11.47□□□□□ -0.57
CHD7-211ENST00000532149 STT3AP46977 705 aa11.47□□□□□ -0.57
CHD7-211ENST00000532149 GABRA4P48169 554 aa11.47□□□□□ -0.57
CHD7-211ENST00000532149 ST13P50502 369 aaKnown RBP11.47□□□□□ -0.57
CHD7-211ENST00000532149 MAZP56270 477 aaKnown RBP11.47□□□□□ -0.57
CHD7-211ENST00000532149 TAS2R41P59536 307 aa11.47□□□□□ -0.57
CHD7-211ENST00000532149 POU6F2P78424 691 aaPredicted RBP11.47□□□□□ -0.57
CHD7-211ENST00000532149 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.47□□□□□ -0.57
CHD7-211ENST00000532149 RAB39AQ14964 217 aa11.47□□□□□ -0.57
CHD7-211ENST00000532149 DECR1Q16698 335 aa11.47□□□□□ -0.57
CHD7-211ENST00000532149 RPS26P11Q5JNZ5 115 aaPredicted RBP11.47□□□□□ -0.57
CHD7-211ENST00000532149 FGD3Q5JSP0 725 aa11.47□□□□□ -0.57
CHD7-211ENST00000532149 RNLSQ5VYX0 342 aa11.47□□□□□ -0.57
CHD7-211ENST00000532149 CASP12Q6UXS9 341 aa11.47□□□□□ -0.57
CHD7-211ENST00000532149 DEF8Q6ZN54 512 aa11.47□□□□□ -0.57
CHD7-211ENST00000532149 BPHLQ86WA6 291 aaPredicted RBP11.47□□□□□ -0.57
CHD7-211ENST00000532149 GPR135Q8IZ08 494 aa11.47□□□□□ -0.57
CHD7-211ENST00000532149 CLDN22Q8N7P3 220 aa11.47□□□□□ -0.57
CHD7-211ENST00000532149 COX18Q8N8Q8 333 aa11.47□□□□□ -0.57
CHD7-211ENST00000532149 BPIFB6Q8NFQ5 453 aa11.47□□□□□ -0.57
CHD7-211ENST00000532149 OR8J1Q8NGP2 316 aa11.47□□□□□ -0.57
CHD7-211ENST00000532149 CEP76Q8TAP6 659 aa11.47□□□□□ -0.57
CHD7-211ENST00000532149 ACOT11Q8WXI4 607 aaPredicted RBP11.47□□□□□ -0.57
CHD7-211ENST00000532149 SLC9A6Q92581 669 aa11.47□□□□□ -0.57
CHD7-211ENST00000532149 RIT1Q92963 219 aa11.47□□□□□ -0.57
CHD7-211ENST00000532149 ART5Q96L15 291 aa11.47□□□□□ -0.57
CHD7-211ENST00000532149 HS6ST2Q96MM7 605 aa11.47□□□□□ -0.57
CHD7-211ENST00000532149 DGAT2Q96PD7 388 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms