RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 METTL4Q8N3J2 472 aa2.44□□□□□ -2.02
CD44-234ENST00000531873 SUMF1Q8NBK3 374 aa2.44□□□□□ -2.02
CD44-234ENST00000531873 STEAP2Q8NFT2 490 aa2.44□□□□□ -2.02
CD44-234ENST00000531873 FLVCR1-AS1Q8TAF5 88 aa2.44□□□□□ -2.02
CD44-234ENST00000531873 SHC3Q92529 594 aa2.44□□□□□ -2.02
CD44-234ENST00000531873 UPRTQ96BW1 309 aa2.44□□□□□ -2.02
CD44-234ENST00000531873 DHTKD1Q96HY7 919 aaPredicted RBP2.44□□□□□ -2.02
CD44-234ENST00000531873 ANKRD27Q96NW4 1050 aa2.44□□□□□ -2.02
CD44-234ENST00000531873 AGAP4Q96P64 663 aa2.44□□□□□ -2.02
CD44-234ENST00000531873 ZNF607Q96SK3 696 aa2.44□□□□□ -2.02
CD44-234ENST00000531873 C19orf43Q9BQ61 176 aa2.44□□□□□ -2.02
CD44-234ENST00000531873 ALG12Q9BV10 488 aa2.44□□□□□ -2.02
CD44-234ENST00000531873 EDEM2Q9BV94 578 aa2.44□□□□□ -2.02
CD44-234ENST00000531873 TBC1D10AQ9BXI6 508 aa2.44□□□□□ -2.02
CD44-234ENST00000531873 OCR1Q9BZK8 76 aa2.44□□□□□ -2.02
CD44-234ENST00000531873 TSPY26PQ9H489 355 aa2.44□□□□□ -2.02
CD44-234ENST00000531873 MOB1AQ9H8S9 216 aa2.44□□□□□ -2.02
CD44-234ENST00000531873 GORASP2Q9H8Y8 452 aa2.44□□□□□ -2.02
CD44-234ENST00000531873 COG4Q9H9E3 785 aa2.44□□□□□ -2.02
CD44-234ENST00000531873 IL1RL2Q9HB29 575 aa2.44□□□□□ -2.02
CD44-234ENST00000531873 DCAF13Q9NV06 445 aaKnown RBP2.44□□□□□ -2.02
CD44-234ENST00000531873 RBM28Q9NW13 759 aaKnown RBP2.44□□□□□ -2.02
CD44-234ENST00000531873 C1orf123Q9NWV4 160 aa2.44□□□□□ -2.02
CD44-234ENST00000531873 THEGQ9P2T0 379 aa2.44□□□□□ -2.02
CD44-234ENST00000531873 GHRLQ9UBU3 117 aa2.44□□□□□ -2.02
CD44-234ENST00000531873 SPATA2Q9UM82 520 aa2.44□□□□□ -2.02
CD44-234ENST00000531873 SNX6Q9UNH7 406 aa2.44□□□□□ -2.02
CD44-234ENST00000531873 A0A0J9YVX5 310 aa2.43□□□□□ -2.02
CD44-234ENST00000531873 CLRN2A0PK11 232 aa2.43□□□□□ -2.02
CD44-234ENST00000531873 ZSCAN5CA6NGD5 496 aaPredicted RBP2.43□□□□□ -2.02
CD44-234ENST00000531873 RNF212BA8MTL3 300 aa2.43□□□□□ -2.02
CD44-234ENST00000531873 EPM2AB3EWF7 344 aa2.43□□□□□ -2.02
CD44-234ENST00000531873 NPIPA2E9PIF3 369 aa2.43□□□□□ -2.02
CD44-234ENST00000531873 PPIAL4DF5H284 164 aa2.43□□□□□ -2.02
CD44-234ENST00000531873 MPHOSPH10O00566 681 aaKnown RBP2.43□□□□□ -2.02
CD44-234ENST00000531873 NTN3O00634 580 aaPredicted RBP2.43□□□□□ -2.02
CD44-234ENST00000531873 SOCS3O14543 225 aa2.43□□□□□ -2.02
CD44-234ENST00000531873 MAGEB3O15480 346 aa2.43□□□□□ -2.02
CD44-234ENST00000531873 ZSCAN12O43309 604 aa2.43□□□□□ -2.02
CD44-234ENST00000531873 IDH3BO43837 385 aa2.43□□□□□ -2.02
CD44-234ENST00000531873 JAK2O60674 1132 aa2.43□□□□□ -2.02
CD44-234ENST00000531873 PDE5AO76074 875 aa2.43□□□□□ -2.02
CD44-234ENST00000531873 SEMA4FO95754 770 aa2.43□□□□□ -2.02
CD44-234ENST00000531873 IGSF6O95976 241 aa2.43□□□□□ -2.02
CD44-234ENST00000531873 GSTA1P08263 222 aa2.43□□□□□ -2.02
CD44-234ENST00000531873 WNT2P09544 360 aa2.43□□□□□ -2.02
CD44-234ENST00000531873 GSTT2P0CG29 244 aa2.43□□□□□ -2.02
CD44-234ENST00000531873 GSTT2BP0CG30 244 aa2.43□□□□□ -2.02
CD44-234ENST00000531873 RGS4P49798 205 aa2.43□□□□□ -2.02
CD44-234ENST00000531873 GSK3BP49841 420 aa2.43□□□□□ -2.02
CD44-234ENST00000531873 CSRP3P50461 194 aa2.43□□□□□ -2.02
CD44-234ENST00000531873 ATP4BP51164 291 aa2.43□□□□□ -2.02
CD44-234ENST00000531873 PRELPP51888 382 aa2.43□□□□□ -2.02
CD44-234ENST00000531873 CRIP2P52943 208 aaPredicted RBP2.43□□□□□ -2.02
CD44-234ENST00000531873 SPIBQ01892 262 aa2.43□□□□□ -2.02
CD44-234ENST00000531873 ZNF33BQ06732 778 aa2.43□□□□□ -2.02
CD44-234ENST00000531873 SELPLGQ14242 412 aa2.43□□□□□ -2.02
CD44-234ENST00000531873 CHI3L2Q15782 390 aa2.43□□□□□ -2.02
CD44-234ENST00000531873 PCK2Q16822 640 aa2.43□□□□□ -2.02
CD44-234ENST00000531873 TMEM52BQ4KMG9 183 aa2.43□□□□□ -2.02
CD44-234ENST00000531873 CEP55Q53EZ4 464 aa2.43□□□□□ -2.02
CD44-234ENST00000531873 ACER2Q5QJU3 275 aa2.43□□□□□ -2.02
CD44-234ENST00000531873 BEND6Q5SZJ8 279 aaPredicted RBP2.43□□□□□ -2.02
CD44-234ENST00000531873 AGAP7PQ5VUJ5 663 aa2.43□□□□□ -2.02
CD44-234ENST00000531873 CENPUQ71F23 418 aa2.43□□□□□ -2.02
CD44-234ENST00000531873 Q7L0L9 218 aa2.43□□□□□ -2.02
CD44-234ENST00000531873 PRSS48Q7RTY5 328 aa2.43□□□□□ -2.02
CD44-234ENST00000531873 TAF15Q92804 592 aaKnown RBP eCLIP2.43□□□□□ -2.02
CD44-234ENST00000531873 MOCOSQ96EN8 888 aa2.43□□□□□ -2.02
CD44-234ENST00000531873 C11orf24Q96F05 449 aaPredicted RBP2.43□□□□□ -2.02
CD44-234ENST00000531873 TTC25Q96NG3 672 aa2.43□□□□□ -2.02
CD44-234ENST00000531873 DUX3Q96PT4 197 aa2.43□□□□□ -2.02
CD44-234ENST00000531873 TTYH2Q9BSA4 534 aa2.43□□□□□ -2.02
CD44-234ENST00000531873 GSDMCQ9BYG8 508 aa2.43□□□□□ -2.02
CD44-234ENST00000531873 STRADBQ9C0K7 418 aa2.43□□□□□ -2.02
CD44-234ENST00000531873 UPF3AQ9H1J1 476 aaKnown RBP2.43□□□□□ -2.02
CD44-234ENST00000531873 SLC25A51Q9H1U9 297 aa2.43□□□□□ -2.02
CD44-234ENST00000531873 RHOJQ9H4E5 214 aa2.43□□□□□ -2.02
CD44-234ENST00000531873 LPAR2Q9HBW0 351 aa2.43□□□□□ -2.02
CD44-234ENST00000531873 DUS2Q9NX74 493 aaKnown RBP2.43□□□□□ -2.02
CD44-234ENST00000531873 KLRF1Q9NZS2 232 aa2.43□□□□□ -2.02
CD44-234ENST00000531873 RABL2BQ9UNT1 228 aa2.43□□□□□ -2.02
CD44-234ENST00000531873 RNF6Q9Y252 685 aa2.43□□□□□ -2.02
CD44-234ENST00000531873 SLC9A8Q9Y2E8 581 aa2.43□□□□□ -2.02
CD44-234ENST00000531873 EXOSC1Q9Y3B2 195 aaKnown RBP2.43□□□□□ -2.02
CD44-234ENST00000531873 ASB3Q9Y575 518 aa2.43□□□□□ -2.02
CD44-234ENST00000531873 AP4B1Q9Y6B7 739 aa2.43□□□□□ -2.02
CD44-234ENST00000531873 CCDC7Q96M83 1385 aa2.43□□□□□ -2.02
CD44-234ENST00000531873 METP08581 1390 aa2.42□□□□□ -2.02
CD44-234ENST00000531873 IGLV7-46A0A075B6I9 117 aa2.42□□□□□ -2.02
CD44-234ENST00000531873 IGLV4-3A0A075B6K6 122 aa2.42□□□□□ -2.02
CD44-234ENST00000531873 SYNJ2BP-COX16A0A087WUM0 186 aa2.42□□□□□ -2.02
CD44-234ENST00000531873 NPIPA5A0A0B4J1W7 369 aa2.42□□□□□ -2.02
CD44-234ENST00000531873 BCLAF3A2AJT9 711 aaKnown RBP2.42□□□□□ -2.02
CD44-234ENST00000531873 MBLAC1A4D2B0 266 aaPredicted RBP2.42□□□□□ -2.02
CD44-234ENST00000531873 CYSRT1A8MQ03 144 aa2.42□□□□□ -2.02
CD44-234ENST00000531873 A8MUI8 341 aa2.42□□□□□ -2.02
CD44-234ENST00000531873 NPIPA5E9PKD4 350 aa2.42□□□□□ -2.02
CD44-234ENST00000531873 K7ERI5 159 aa2.42□□□□□ -2.02
CD44-234ENST00000531873 CLDN5O00501 218 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms