RNA–Protein interactions for RNA: ENST00000519540.5

FAM49B-214, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49B, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-214ENST00000519540 SLC13A2Q13183 592 aa17.23■□□□□ 0.35
FAM49B-214ENST00000519540 SRSF5Q13243 272 aaKnown RBP17.23■□□□□ 0.35
FAM49B-214ENST00000519540 DGCR6Q14129 220 aa17.23■□□□□ 0.35
FAM49B-214ENST00000519540 SYT16Q17RD7 645 aa17.23■□□□□ 0.35
FAM49B-214ENST00000519540 DHRS4L2Q6PKH6 230 aa17.23■□□□□ 0.35
FAM49B-214ENST00000519540 KLHL17Q6TDP4 642 aa17.23■□□□□ 0.35
FAM49B-214ENST00000519540 ZNF595Q8IYB9 648 aa17.23■□□□□ 0.35
FAM49B-214ENST00000519540 ENTHD1Q8IYW4 607 aa17.23■□□□□ 0.35
FAM49B-214ENST00000519540 SPARTQ8N0X7 666 aa17.23■□□□□ 0.35
FAM49B-214ENST00000519540 SLC7A13Q8TCU3 470 aa17.23■□□□□ 0.35
FAM49B-214ENST00000519540 FNDC11Q9BVV2 318 aa17.23■□□□□ 0.35
FAM49B-214ENST00000519540 DUSP22Q9NRW4 184 aa17.23■□□□□ 0.35
FAM49B-214ENST00000519540 RASSF1Q9NS23 344 aa17.23■□□□□ 0.35
FAM49B-214ENST00000519540 MRPS33Q9Y291 106 aaKnown RBP17.23■□□□□ 0.35
FAM49B-214ENST00000519540 WDR45Q9Y484 360 aa17.23■□□□□ 0.35
FAM49B-214ENST00000519540 USP34Q70CQ2 3546 aa17.23■□□□□ 0.35
FAM49B-214ENST00000519540 BLACEA4D250 179 aa17.23■□□□□ 0.35
FAM49B-214ENST00000519540 TGFBR3LH3BV60 316 aa17.23■□□□□ 0.35
FAM49B-214ENST00000519540 OR10H2O60403 315 aa17.23■□□□□ 0.35
FAM49B-214ENST00000519540 MYF5P13349 255 aa17.23■□□□□ 0.35
FAM49B-214ENST00000519540 JUNBP17275 347 aaPredicted RBP17.23■□□□□ 0.35
FAM49B-214ENST00000519540 ZXDAP98168 799 aa17.23■□□□□ 0.35
FAM49B-214ENST00000519540 KCNAB1Q14722 419 aa17.23■□□□□ 0.35
FAM49B-214ENST00000519540 NEDD8Q15843 81 aa17.23■□□□□ 0.35
FAM49B-214ENST00000519540 PROX2Q3B8N5 592 aa17.23■□□□□ 0.35
FAM49B-214ENST00000519540 AMZ1Q400G9 498 aa17.23■□□□□ 0.35
FAM49B-214ENST00000519540 PLXDC1Q8IUK5 500 aa17.23■□□□□ 0.35
FAM49B-214ENST00000519540 CARFQ8N187 725 aa17.23■□□□□ 0.35
FAM49B-214ENST00000519540 ADAMTS18Q8TE60 1221 aa17.23■□□□□ 0.35
FAM49B-214ENST00000519540 MMABQ96EY8 250 aaPredicted RBP17.23■□□□□ 0.35
FAM49B-214ENST00000519540 PRRC1Q96M27 445 aa17.23■□□□□ 0.35
FAM49B-214ENST00000519540 STACQ99469 402 aa17.23■□□□□ 0.35
FAM49B-214ENST00000519540 TRIM45Q9H8W5 580 aaPredicted RBP17.23■□□□□ 0.35
FAM49B-214ENST00000519540 ENOPH1Q9UHY7 261 aa17.23■□□□□ 0.35
FAM49B-214ENST00000519540 MGAT4BQ9UQ53 548 aa17.23■□□□□ 0.35
FAM49B-214ENST00000519540 GPR55Q9Y2T6 319 aaPredicted RBP17.23■□□□□ 0.35
FAM49B-214ENST00000519540 SH3PXD2BA1X283 911 aa17.22■□□□□ 0.35
FAM49B-214ENST00000519540 HRO43593 1189 aa17.22■□□□□ 0.35
FAM49B-214ENST00000519540 DUX1O43812 170 aa17.22■□□□□ 0.35
FAM49B-214ENST00000519540 WBP4O75554 376 aaKnown RBP17.22■□□□□ 0.35
FAM49B-214ENST00000519540 ADAP00813 363 aa17.22■□□□□ 0.35
FAM49B-214ENST00000519540 GNSP15586 552 aa17.22■□□□□ 0.35
FAM49B-214ENST00000519540 AVPR1BP47901 424 aa17.22■□□□□ 0.35
FAM49B-214ENST00000519540 EMP3P54852 163 aa17.22■□□□□ 0.35
FAM49B-214ENST00000519540 HSD11B2P80365 405 aa17.22■□□□□ 0.35
FAM49B-214ENST00000519540 IGLV3-21P80748 117 aaPredicted RBP17.22■□□□□ 0.35
FAM49B-214ENST00000519540 PIGFQ07326 219 aa17.22■□□□□ 0.35
FAM49B-214ENST00000519540 ERV3-1Q14264 604 aa17.22■□□□□ 0.35
FAM49B-214ENST00000519540 GRM7Q14831 915 aa17.22■□□□□ 0.35
FAM49B-214ENST00000519540 RAB39AQ14964 217 aa17.22■□□□□ 0.35
FAM49B-214ENST00000519540 NR1D2Q14995 579 aa17.22■□□□□ 0.35
FAM49B-214ENST00000519540 CCNJQ5T5M9 372 aa17.22■□□□□ 0.35
FAM49B-214ENST00000519540 XAF1Q6GPH4 301 aa17.22■□□□□ 0.35
FAM49B-214ENST00000519540 WDR5BQ86VZ2 330 aa17.22■□□□□ 0.35
FAM49B-214ENST00000519540 VWA5B2Q8N398 1253 aa17.22■□□□□ 0.35
FAM49B-214ENST00000519540 CLIP4Q8N3C7 705 aa17.22■□□□□ 0.35
FAM49B-214ENST00000519540 Q8N9G6 341 aaPredicted RBP17.22■□□□□ 0.35
FAM49B-214ENST00000519540 CXorf21Q9HAI6 301 aa17.22■□□□□ 0.35
FAM49B-214ENST00000519540 MAN2C1Q9NTJ4 1040 aa17.22■□□□□ 0.35
FAM49B-214ENST00000519540 RSL24D1Q9UHA3 163 aaKnown RBP17.22■□□□□ 0.35
FAM49B-214ENST00000519540 SLC13A4Q9UKG4 626 aa17.22■□□□□ 0.35
FAM49B-214ENST00000519540 SATB2Q9UPW6 733 aa17.22■□□□□ 0.35
FAM49B-214ENST00000519540 RNF6Q9Y252 685 aa17.22■□□□□ 0.35
FAM49B-214ENST00000519540 IFT52Q9Y366 437 aa17.22■□□□□ 0.35
FAM49B-214ENST00000519540 TMEM184BQ9Y519 407 aaPredicted RBP17.22■□□□□ 0.35
FAM49B-214ENST00000519540 COMMD3-BMI1R4GMX3 469 aa17.22■□□□□ 0.35
FAM49B-214ENST00000519540 H3BMH7 237 aa17.21■□□□□ 0.35
FAM49B-214ENST00000519540 CLDN4O14493 209 aa17.21■□□□□ 0.35
FAM49B-214ENST00000519540 OR10H3O60404 316 aa17.21■□□□□ 0.35
FAM49B-214ENST00000519540 CDC123O75794 336 aaPredicted RBP17.21■□□□□ 0.35
FAM49B-214ENST00000519540 CBX7O95931 251 aa17.21■□□□□ 0.35
FAM49B-214ENST00000519540 TDGF1P13385 188 aa17.21■□□□□ 0.35
FAM49B-214ENST00000519540 S1PR1P21453 382 aa17.21■□□□□ 0.35
FAM49B-214ENST00000519540 GSSP48637 474 aa17.21■□□□□ 0.35
FAM49B-214ENST00000519540 SEPHS1P49903 392 aa17.21■□□□□ 0.35
FAM49B-214ENST00000519540 BTG2P78543 158 aa17.21■□□□□ 0.35
FAM49B-214ENST00000519540 STX4Q12846 297 aa17.21■□□□□ 0.35
FAM49B-214ENST00000519540 SMN1Q16637 294 aaKnown RBP17.21■□□□□ 0.35
FAM49B-214ENST00000519540 DCST2Q5T1A1 773 aa17.21■□□□□ 0.35
FAM49B-214ENST00000519540 PMS2CLQ68D20 193 aa17.21■□□□□ 0.35
FAM49B-214ENST00000519540 PODNL1Q6PEZ8 512 aa17.21■□□□□ 0.35
FAM49B-214ENST00000519540 PEX5LQ8IYB4 626 aa17.21■□□□□ 0.35
FAM49B-214ENST00000519540 APH1BQ8WW43 257 aa17.21■□□□□ 0.35
FAM49B-214ENST00000519540 PIK3R3Q92569 461 aa17.21■□□□□ 0.35
FAM49B-214ENST00000519540 NODALQ96S42 347 aa17.21■□□□□ 0.35
FAM49B-214ENST00000519540 TUBA1CQ9BQE3 449 aa17.21■□□□□ 0.35
FAM49B-214ENST00000519540 ALOXE3Q9BYJ1 711 aa17.21■□□□□ 0.35
FAM49B-214ENST00000519540 ZNF350Q9GZX5 532 aa17.21■□□□□ 0.35
FAM49B-214ENST00000519540 DUSP21Q9H596 190 aa17.21■□□□□ 0.35
FAM49B-214ENST00000519540 FANCEQ9HB96 536 aa17.21■□□□□ 0.35
FAM49B-214ENST00000519540 PRTFDC1Q9NRG1 225 aa17.21■□□□□ 0.35
FAM49B-214ENST00000519540 TMEM9Q9P0T7 183 aa17.21■□□□□ 0.35
FAM49B-214ENST00000519540 ZNF232Q9UNY5 417 aa17.21■□□□□ 0.35
FAM49B-214ENST00000519540 TPRKBQ9Y3C4 175 aa17.21■□□□□ 0.35
FAM49B-214ENST00000519540 CLDN16Q9Y5I7 305 aa17.21■□□□□ 0.35
FAM49B-214ENST00000519540 H0YIG0 161 aa17.21■□□□□ 0.35
FAM49B-214ENST00000519540 TPST2O60704 377 aa17.21■□□□□ 0.35
FAM49B-214ENST00000519540 CD1CP29017 333 aa17.21■□□□□ 0.35
FAM49B-214ENST00000519540 TTKP33981 857 aa17.21■□□□□ 0.35
FAM49B-214ENST00000519540 GPLD1P80108 840 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms