RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 UGT2B28Q9BY64 529 aa8.03□□□□□ -1.12
U2AF1-212ENST00000496462 OR51I1Q9H343 314 aa8.03□□□□□ -1.12
U2AF1-212ENST00000496462 MMADHCQ9H3L0 296 aaPredicted RBP8.03□□□□□ -1.12
U2AF1-212ENST00000496462 MTHFD2LQ9H903 347 aaPredicted RBP8.03□□□□□ -1.12
U2AF1-212ENST00000496462 TIGARQ9NQ88 270 aa8.03□□□□□ -1.12
U2AF1-212ENST00000496462 UBQLN4Q9NRR5 601 aa8.03□□□□□ -1.12
U2AF1-212ENST00000496462 KCMF1Q9P0J7 381 aa8.03□□□□□ -1.12
U2AF1-212ENST00000496462 MAGEL2Q9UJ55 1249 aa8.03□□□□□ -1.12
U2AF1-212ENST00000496462 ZNF225Q9UK10 706 aa8.03□□□□□ -1.12
U2AF1-212ENST00000496462 HS3ST3B1Q9Y662 390 aa8.03□□□□□ -1.12
U2AF1-212ENST00000496462 ELOVL7A1L3X0 281 aa8.02□□□□□ -1.13
U2AF1-212ENST00000496462 FRG2CA6NGY1 282 aa8.02□□□□□ -1.13
U2AF1-212ENST00000496462 PRAMEF4O60810 478 aa8.02□□□□□ -1.13
U2AF1-212ENST00000496462 DBIP07108 87 aaKnown RBP8.02□□□□□ -1.13
U2AF1-212ENST00000496462 DRD5P21918 477 aa8.02□□□□□ -1.13
U2AF1-212ENST00000496462 TACR1P25103 407 aa8.02□□□□□ -1.13
U2AF1-212ENST00000496462 SLC6A8P48029 635 aa8.02□□□□□ -1.13
U2AF1-212ENST00000496462 NUP107P57740 925 aa8.02□□□□□ -1.13
U2AF1-212ENST00000496462 CHRNB3Q05901 458 aa8.02□□□□□ -1.13
U2AF1-212ENST00000496462 GPR68Q15743 365 aa8.02□□□□□ -1.13
U2AF1-212ENST00000496462 LRRC23Q53EV4 343 aaPredicted RBP8.02□□□□□ -1.13
U2AF1-212ENST00000496462 PRAMEF9Q5VWM5 478 aa8.02□□□□□ -1.13
U2AF1-212ENST00000496462 REEP3Q6NUK4 255 aa8.02□□□□□ -1.13
U2AF1-212ENST00000496462 FAM111BQ6SJ93 734 aa8.02□□□□□ -1.13
U2AF1-212ENST00000496462 LANCL3Q6ZV70 420 aa8.02□□□□□ -1.13
U2AF1-212ENST00000496462 UBE3DQ7Z6J8 389 aa8.02□□□□□ -1.13
U2AF1-212ENST00000496462 DTX1Q86Y01 620 aa8.02□□□□□ -1.13
U2AF1-212ENST00000496462 SPNS2Q8IVW8 549 aa8.02□□□□□ -1.13
U2AF1-212ENST00000496462 C10orf53Q8N6V4 93 aa8.02□□□□□ -1.13
U2AF1-212ENST00000496462 OR8J3Q8NGG0 315 aa8.02□□□□□ -1.13
U2AF1-212ENST00000496462 PMEPA1Q969W9 287 aa8.02□□□□□ -1.13
U2AF1-212ENST00000496462 EGLN2Q96KS0 407 aa8.02□□□□□ -1.13
U2AF1-212ENST00000496462 SLC35A3Q9Y2D2 325 aa8.02□□□□□ -1.13
U2AF1-212ENST00000496462 ORC6Q9Y5N6 252 aa8.02□□□□□ -1.13
U2AF1-212ENST00000496462 IGHV1-45A0A0A0MS14 117 aa8.02□□□□□ -1.13
U2AF1-212ENST00000496462 A0A0G2JPF8 293 aa8.02□□□□□ -1.13
U2AF1-212ENST00000496462 OR5H15A6NDH6 313 aa8.02□□□□□ -1.13
U2AF1-212ENST00000496462 HNRNPCL2B2RXH8 293 aa8.02□□□□□ -1.13
U2AF1-212ENST00000496462 HNRNPCL3B7ZW38 293 aa8.02□□□□□ -1.13
U2AF1-212ENST00000496462 ASNA1O43681 348 aa8.02□□□□□ -1.13
U2AF1-212ENST00000496462 HMGN2P05204 90 aaKnown RBP8.02□□□□□ -1.13
U2AF1-212ENST00000496462 HNRNPCL4P0DMR1 293 aa8.02□□□□□ -1.13
U2AF1-212ENST00000496462 GP1BBP13224 206 aa8.02□□□□□ -1.13
U2AF1-212ENST00000496462 PER3P56645 1201 aa8.02□□□□□ -1.13
U2AF1-212ENST00000496462 RGS8P57771 180 aaPredicted RBP8.02□□□□□ -1.13
U2AF1-212ENST00000496462 CDK6Q00534 326 aa8.02□□□□□ -1.13
U2AF1-212ENST00000496462 EXOSC7Q15024 291 aaKnown RBP8.02□□□□□ -1.13
U2AF1-212ENST00000496462 SLC30A6Q6NXT4 461 aa8.02□□□□□ -1.13
U2AF1-212ENST00000496462 PPP1R32Q7Z5V6 425 aa8.02□□□□□ -1.13
U2AF1-212ENST00000496462 CAMKMTQ7Z624 323 aa8.02□□□□□ -1.13
U2AF1-212ENST00000496462 POU5F2Q8N7G0 328 aa8.02□□□□□ -1.13
U2AF1-212ENST00000496462 OIT3Q8WWZ8 545 aa8.02□□□□□ -1.13
U2AF1-212ENST00000496462 UBL7Q96S82 380 aaPredicted RBP8.02□□□□□ -1.13
U2AF1-212ENST00000496462 SECISBP2Q96T21 854 aaKnown RBP8.02□□□□□ -1.13
U2AF1-212ENST00000496462 TAPBPLQ9BX59 468 aa8.02□□□□□ -1.13
U2AF1-212ENST00000496462 ENAMQ9NRM1 1142 aa8.02□□□□□ -1.13
U2AF1-212ENST00000496462 TUBD1Q9UJT1 453 aa8.02□□□□□ -1.13
U2AF1-212ENST00000496462 K7ENP7 123 aa8.02□□□□□ -1.13
U2AF1-212ENST00000496462 ZNF682O95780 498 aa8.02□□□□□ -1.13
U2AF1-212ENST00000496462 PRR35P0CG20 571 aa8.02□□□□□ -1.13
U2AF1-212ENST00000496462 HLCSP50747 726 aa8.02□□□□□ -1.13
U2AF1-212ENST00000496462 PNLIPRP2P54317 469 aa8.02□□□□□ -1.13
U2AF1-212ENST00000496462 C21orf58P58505 322 aa8.02□□□□□ -1.13
U2AF1-212ENST00000496462 MRPS35P82673 323 aaKnown RBP8.02□□□□□ -1.13
U2AF1-212ENST00000496462 KCNAB2Q13303 367 aa8.02□□□□□ -1.13
U2AF1-212ENST00000496462 RAPSNQ13702 412 aa8.02□□□□□ -1.13
U2AF1-212ENST00000496462 SCARB2Q14108 478 aa8.02□□□□□ -1.13
U2AF1-212ENST00000496462 RCAN2Q14206 197 aa8.02□□□□□ -1.13
U2AF1-212ENST00000496462 MPEG1Q2M385 716 aa8.02□□□□□ -1.13
U2AF1-212ENST00000496462 LIN52Q52LA3 116 aa8.02□□□□□ -1.13
U2AF1-212ENST00000496462 MTX3Q5HYI7 312 aa8.02□□□□□ -1.13
U2AF1-212ENST00000496462 INO80CQ6PI98 192 aaPredicted RBP8.02□□□□□ -1.13
U2AF1-212ENST00000496462 KIRREL2Q6UWL6 708 aa8.02□□□□□ -1.13
U2AF1-212ENST00000496462 RNF130Q86XS8 419 aa8.02□□□□□ -1.13
U2AF1-212ENST00000496462 BRIX1Q8TDN6 353 aaKnown RBP8.02□□□□□ -1.13
U2AF1-212ENST00000496462 FIG4Q92562 907 aa8.02□□□□□ -1.13
U2AF1-212ENST00000496462 LANCL2Q9NS86 450 aa8.02□□□□□ -1.13
U2AF1-212ENST00000496462 MAT2BQ9NZL9 334 aa8.02□□□□□ -1.13
U2AF1-212ENST00000496462 SAMD4AQ9UPU9 718 aaKnown RBP8.02□□□□□ -1.13
U2AF1-212ENST00000496462 FREM2Q5SZK8 3169 aa8.01□□□□□ -1.13
U2AF1-212ENST00000496462 SUV39H1O43463 412 aa8.01□□□□□ -1.13
U2AF1-212ENST00000496462 ITGA10O75578 1167 aa8.01□□□□□ -1.13
U2AF1-212ENST00000496462 OR6A2O95222 327 aa8.01□□□□□ -1.13
U2AF1-212ENST00000496462 DDAH2O95865 285 aa8.01□□□□□ -1.13
U2AF1-212ENST00000496462 HIST1H2ABP04908 130 aa8.01□□□□□ -1.13
U2AF1-212ENST00000496462 TFPIP10646 304 aa8.01□□□□□ -1.13
U2AF1-212ENST00000496462 ELAVL4P26378 380 aaKnown RBP8.01□□□□□ -1.13
U2AF1-212ENST00000496462 ALDH6A1Q02252 535 aaKnown RBP8.01□□□□□ -1.13
U2AF1-212ENST00000496462 HIST3H2AQ7L7L0 130 aa8.01□□□□□ -1.13
U2AF1-212ENST00000496462 DEFB107AQ8IZN7 70 aa8.01□□□□□ -1.13
U2AF1-212ENST00000496462 PNPT1Q8TCS8 783 aaKnown RBP8.01□□□□□ -1.13
U2AF1-212ENST00000496462 WDR60Q8WVS4 1066 aa8.01□□□□□ -1.13
U2AF1-212ENST00000496462 HIST1H2ACQ93077 130 aa8.01□□□□□ -1.13
U2AF1-212ENST00000496462 CIDECQ96AQ7 238 aaPredicted RBP8.01□□□□□ -1.13
U2AF1-212ENST00000496462 OSBPL11Q9BXB4 747 aa8.01□□□□□ -1.13
U2AF1-212ENST00000496462 WWTR1Q9GZV5 400 aa8.01□□□□□ -1.13
U2AF1-212ENST00000496462 WASF3Q9UPY6 502 aa8.01□□□□□ -1.13
U2AF1-212ENST00000496462 PCDHGA9Q9Y5G4 932 aaKnown RBP8.01□□□□□ -1.13
U2AF1-212ENST00000496462 COL5A1P20908 1838 aaPredicted RBP8.01□□□□□ -1.13
U2AF1-212ENST00000496462 LOC102723996A0A087X1L8 192 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms