RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 VPS33AQ96AX1 596 aa17.88■□□□□ 0.45
HDAC4-212ENST00000495497 SGCZQ96LD1 299 aa17.88■□□□□ 0.45
HDAC4-212ENST00000495497 INPP5KQ9BT40 448 aa17.88■□□□□ 0.45
HDAC4-212ENST00000495497 NEUROD4Q9HD90 331 aa17.88■□□□□ 0.45
HDAC4-212ENST00000495497 FAM120CQ9NX05 1096 aaKnown RBP17.88■□□□□ 0.45
HDAC4-212ENST00000495497 BTNL2Q9UIR0 455 aa17.88■□□□□ 0.45
HDAC4-212ENST00000495497 PCDHGB4Q9UN71 923 aa17.88■□□□□ 0.45
HDAC4-212ENST00000495497 OR10H1Q9Y4A9 318 aa17.88■□□□□ 0.45
HDAC4-212ENST00000495497 CHCHD2Q9Y6H1 151 aaPredicted RBP17.88■□□□□ 0.45
HDAC4-212ENST00000495497 FAM234BA2RU67 622 aa17.87■□□□□ 0.45
HDAC4-212ENST00000495497 WISP2O76076 250 aa17.87■□□□□ 0.45
HDAC4-212ENST00000495497 C1QCP02747 245 aa17.87■□□□□ 0.45
HDAC4-212ENST00000495497 P04436 131 aa17.87■□□□□ 0.45
HDAC4-212ENST00000495497 HMGN2P05204 90 aaKnown RBP17.87■□□□□ 0.45
HDAC4-212ENST00000495497 IL6P05231 212 aa17.87■□□□□ 0.45
HDAC4-212ENST00000495497 GABRA3P34903 492 aa17.87■□□□□ 0.45
HDAC4-212ENST00000495497 CDKN2CP42773 168 aa17.87■□□□□ 0.45
HDAC4-212ENST00000495497 MRPL19P49406 292 aaKnown RBP17.87■□□□□ 0.45
HDAC4-212ENST00000495497 SEC24CP53992 1094 aa17.87■□□□□ 0.45
HDAC4-212ENST00000495497 LASP1Q14847 261 aaKnown RBP17.87■□□□□ 0.45
HDAC4-212ENST00000495497 ZNHIT3Q15649 155 aaPredicted RBP17.87■□□□□ 0.45
HDAC4-212ENST00000495497 TIGD2Q4W5G0 525 aa17.87■□□□□ 0.45
HDAC4-212ENST00000495497 SLC22A10Q63ZE4 541 aa17.87■□□□□ 0.45
HDAC4-212ENST00000495497 GOLM1Q8NBJ4 401 aa17.87■□□□□ 0.45
HDAC4-212ENST00000495497 SLC16A11Q8NCK7 471 aa17.87■□□□□ 0.45
HDAC4-212ENST00000495497 SFXN5Q8TD22 340 aa17.87■□□□□ 0.45
HDAC4-212ENST00000495497 HGDQ93099 445 aa17.87■□□□□ 0.45
HDAC4-212ENST00000495497 EFHD2Q96C19 240 aaPredicted RBP17.87■□□□□ 0.45
HDAC4-212ENST00000495497 CCDC115Q96NT0 180 aa17.87■□□□□ 0.45
HDAC4-212ENST00000495497 SACM1LQ9NTJ5 587 aa17.87■□□□□ 0.45
HDAC4-212ENST00000495497 GPATCH2Q9NW75 528 aa17.87■□□□□ 0.45
HDAC4-212ENST00000495497 CCDC167Q9P0B6 97 aa17.87■□□□□ 0.45
HDAC4-212ENST00000495497 KLF13Q9Y2Y9 288 aaPredicted RBP17.87■□□□□ 0.45
HDAC4-212ENST00000495497 CAPN14A8MX76 684 aa17.86■□□□□ 0.45
HDAC4-212ENST00000495497 UGT2B11O75310 529 aa17.86■□□□□ 0.45
HDAC4-212ENST00000495497 GSNP06396 782 aa17.86■□□□□ 0.45
HDAC4-212ENST00000495497 CNR1P21554 472 aa17.86■□□□□ 0.45
HDAC4-212ENST00000495497 MAP3K8P41279 467 aa17.86■□□□□ 0.45
HDAC4-212ENST00000495497 DNASE1L1P49184 302 aa17.86■□□□□ 0.45
HDAC4-212ENST00000495497 TMED10P49755 219 aaKnown RBP17.86■□□□□ 0.45
HDAC4-212ENST00000495497 ATP4BP51164 291 aa17.86■□□□□ 0.45
HDAC4-212ENST00000495497 CASP9P55211 416 aa17.86■□□□□ 0.45
HDAC4-212ENST00000495497 SQLEQ14534 574 aa17.86■□□□□ 0.45
HDAC4-212ENST00000495497 DUSP5Q16690 384 aa17.86■□□□□ 0.45
HDAC4-212ENST00000495497 AGKQ53H12 422 aa17.86■□□□□ 0.45
HDAC4-212ENST00000495497 FAM180AQ6UWF9 173 aa17.86■□□□□ 0.45
HDAC4-212ENST00000495497 C6orf120Q7Z4R8 191 aa17.86■□□□□ 0.45
HDAC4-212ENST00000495497 GALNT10Q86SR1 603 aa17.86■□□□□ 0.45
HDAC4-212ENST00000495497 DND1Q8IYX4 353 aaKnown RBP17.86■□□□□ 0.45
HDAC4-212ENST00000495497 CDRT4Q8N9R6 151 aa17.86■□□□□ 0.45
HDAC4-212ENST00000495497 OR56A1Q8NGH5 318 aa17.86■□□□□ 0.45
HDAC4-212ENST00000495497 SPPL2AQ8TCT8 520 aa17.86■□□□□ 0.45
HDAC4-212ENST00000495497 GPR151Q8TDV0 419 aa17.86■□□□□ 0.45
HDAC4-212ENST00000495497 JADE3Q92613 823 aa17.86■□□□□ 0.45
HDAC4-212ENST00000495497 HOXB13Q92826 284 aaPredicted RBP17.86■□□□□ 0.45
HDAC4-212ENST00000495497 CHMP6Q96FZ7 201 aa17.86■□□□□ 0.45
HDAC4-212ENST00000495497 NODALQ96S42 347 aa17.86■□□□□ 0.45
HDAC4-212ENST00000495497 ADOQ96SZ5 270 aa17.86■□□□□ 0.45
HDAC4-212ENST00000495497 ZNF385DQ9H6B1 395 aa17.86■□□□□ 0.45
HDAC4-212ENST00000495497 PROK2Q9HC23 129 aa17.86■□□□□ 0.45
HDAC4-212ENST00000495497 Q9N2J8 555 aa17.86■□□□□ 0.45
HDAC4-212ENST00000495497 CNOT11Q9UKZ1 510 aaKnown RBP17.86■□□□□ 0.45
HDAC4-212ENST00000495497 CBLCQ9ULV8 474 aa17.86■□□□□ 0.45
HDAC4-212ENST00000495497 RNF103-CHMP3A0A140T963 221 aa17.85■□□□□ 0.45
HDAC4-212ENST00000495497 ASPDHA6ND91 283 aa17.85■□□□□ 0.45
HDAC4-212ENST00000495497 KLRC4-KLRK1H3BQV0 150 aa17.85■□□□□ 0.45
HDAC4-212ENST00000495497 TP53I11O14683 189 aa17.85■□□□□ 0.45
HDAC4-212ENST00000495497 TSPAN2O60636 221 aa17.85■□□□□ 0.45
HDAC4-212ENST00000495497 NKX2-2O95096 273 aa17.85■□□□□ 0.45
HDAC4-212ENST00000495497 NAGAP17050 411 aa17.85■□□□□ 0.45
HDAC4-212ENST00000495497 RFX3P48380 749 aa17.85■□□□□ 0.45
HDAC4-212ENST00000495497 PRIM2P49643 509 aa17.85■□□□□ 0.45
HDAC4-212ENST00000495497 RPS26P62854 115 aaKnown RBP17.85■□□□□ 0.45
HDAC4-212ENST00000495497 INAQ16352 499 aa17.85■□□□□ 0.45
HDAC4-212ENST00000495497 RNFT1Q5M7Z0 435 aa17.85■□□□□ 0.45
HDAC4-212ENST00000495497 EXOSC6Q5RKV6 272 aaKnown RBP17.85■□□□□ 0.45
HDAC4-212ENST00000495497 FBXW8Q8N3Y1 598 aa17.85■□□□□ 0.45
HDAC4-212ENST00000495497 BCORP1Q8N888 145 aa17.85■□□□□ 0.45
HDAC4-212ENST00000495497 FAM98AQ8NCA5 519 aaKnown RBP17.85■□□□□ 0.45
HDAC4-212ENST00000495497 OR2M7Q8NG81 312 aa17.85■□□□□ 0.45
HDAC4-212ENST00000495497 FAR1Q8WVX9 515 aa17.85■□□□□ 0.45
HDAC4-212ENST00000495497 DIO2Q92813 273 aa17.85■□□□□ 0.45
HDAC4-212ENST00000495497 MIB2Q96AX9 1013 aa17.85■□□□□ 0.45
HDAC4-212ENST00000495497 FRMD6Q96NE9 622 aa17.85■□□□□ 0.45
HDAC4-212ENST00000495497 COL21A1Q96P44 957 aa17.85■□□□□ 0.45
HDAC4-212ENST00000495497 PANX1Q96RD7 426 aa17.85■□□□□ 0.45
HDAC4-212ENST00000495497 SERHL2Q9H4I8 314 aa17.85■□□□□ 0.45
HDAC4-212ENST00000495497 SERHLQ9NQF3 203 aa17.85■□□□□ 0.45
HDAC4-212ENST00000495497 KLHL14Q9P2G3 628 aa17.85■□□□□ 0.45
HDAC4-212ENST00000495497 TRIM33Q9UPN9 1127 aa17.85■□□□□ 0.45
HDAC4-212ENST00000495497 KCNE3Q9Y6H6 103 aa17.85■□□□□ 0.45
HDAC4-212ENST00000495497 NR5A2O00482 541 aa17.84■□□□□ 0.45
HDAC4-212ENST00000495497 IGKV1D-16P01601 117 aa17.84■□□□□ 0.45
HDAC4-212ENST00000495497 ALOX5P09917 674 aa17.84■□□□□ 0.45
HDAC4-212ENST00000495497 PLA2G2AP14555 144 aa17.84■□□□□ 0.45
HDAC4-212ENST00000495497 UQCRC2P22695 453 aa17.84■□□□□ 0.45
HDAC4-212ENST00000495497 MST1P26927 711 aa17.84■□□□□ 0.45
HDAC4-212ENST00000495497 IL12BP29460 328 aa17.84■□□□□ 0.45
HDAC4-212ENST00000495497 LSP1P33241 339 aa17.84■□□□□ 0.45
HDAC4-212ENST00000495497 KRT20P35900 424 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms