RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 OR9Q2Q8NGE9 314 aa13.11□□□□□ -0.31
PTPN7-216ENST00000492977 PMM1Q92871 262 aa13.11□□□□□ -0.31
PTPN7-216ENST00000492977 NIPSNAP1Q9BPW8 284 aa13.11□□□□□ -0.31
PTPN7-216ENST00000492977 WFDC6Q9BQY6 131 aa13.11□□□□□ -0.31
PTPN7-216ENST00000492977 CACYBPQ9HB71 228 aaKnown RBP13.11□□□□□ -0.31
PTPN7-216ENST00000492977 HCN3Q9P1Z3 774 aa13.11□□□□□ -0.31
PTPN7-216ENST00000492977 SLC13A4Q9UKG4 626 aa13.11□□□□□ -0.31
PTPN7-216ENST00000492977 A4GNTQ9UNA3 340 aa13.11□□□□□ -0.31
PTPN7-216ENST00000492977 ZNF232Q9UNY5 417 aa13.11□□□□□ -0.31
PTPN7-216ENST00000492977 TRBV4-1A0A0J9YWV2 114 aa13.11□□□□□ -0.31
PTPN7-216ENST00000492977 M0R3H8 397 aa13.11□□□□□ -0.31
PTPN7-216ENST00000492977 SLC1A7O00341 560 aa13.11□□□□□ -0.31
PTPN7-216ENST00000492977 B4GAT1O43505 415 aa13.11□□□□□ -0.31
PTPN7-216ENST00000492977 COQ9O75208 318 aa13.11□□□□□ -0.31
PTPN7-216ENST00000492977 UGT2B17O75795 530 aa13.11□□□□□ -0.31
PTPN7-216ENST00000492977 ANGPTL1O95841 491 aa13.11□□□□□ -0.31
PTPN7-216ENST00000492977 ADAP00813 363 aa13.11□□□□□ -0.31
PTPN7-216ENST00000492977 AGXTP21549 392 aa13.11□□□□□ -0.31
PTPN7-216ENST00000492977 ELAVL4P26378 380 aaKnown RBP13.11□□□□□ -0.31
PTPN7-216ENST00000492977 TTKP33981 857 aa13.11□□□□□ -0.31
PTPN7-216ENST00000492977 GGT2P36268 569 aa13.11□□□□□ -0.31
PTPN7-216ENST00000492977 MAP3K8P41279 467 aa13.11□□□□□ -0.31
PTPN7-216ENST00000492977 CSNK2BP67870 215 aa13.11□□□□□ -0.31
PTPN7-216ENST00000492977 SIGLEC14Q08ET2 396 aa13.11□□□□□ -0.31
PTPN7-216ENST00000492977 STX4Q12846 297 aa13.11□□□□□ -0.31
PTPN7-216ENST00000492977 SLC13A2Q13183 592 aa13.11□□□□□ -0.31
PTPN7-216ENST00000492977 BIKQ13323 160 aa13.11□□□□□ -0.31
PTPN7-216ENST00000492977 ZBED5Q49AG3 693 aa13.11□□□□□ -0.31
PTPN7-216ENST00000492977 FGD3Q5JSP0 725 aa13.11□□□□□ -0.31
PTPN7-216ENST00000492977 WDR74Q6RFH5 385 aaPredicted RBP13.11□□□□□ -0.31
PTPN7-216ENST00000492977 KMT5CQ86Y97 462 aa13.11□□□□□ -0.31
PTPN7-216ENST00000492977 PEX5LQ8IYB4 626 aa13.11□□□□□ -0.31
PTPN7-216ENST00000492977 VWA5B2Q8N398 1253 aa13.11□□□□□ -0.31
PTPN7-216ENST00000492977 AQP11Q8NBQ7 271 aa13.11□□□□□ -0.31
PTPN7-216ENST00000492977 SIMC1Q8NDZ2 872 aa13.11□□□□□ -0.31
PTPN7-216ENST00000492977 OR6T1Q8NGN1 323 aa13.11□□□□□ -0.31
PTPN7-216ENST00000492977 OR52P1PQ8NH57 321 aa13.11□□□□□ -0.31
PTPN7-216ENST00000492977 GAB3Q8WWW8 586 aa13.11□□□□□ -0.31
PTPN7-216ENST00000492977 HOXB13Q92826 284 aaPredicted RBP13.11□□□□□ -0.31
PTPN7-216ENST00000492977 FKBP10Q96AY3 582 aa13.11□□□□□ -0.31
PTPN7-216ENST00000492977 ZG16BQ96DA0 208 aa13.11□□□□□ -0.31
PTPN7-216ENST00000492977 MMABQ96EY8 250 aaPredicted RBP13.11□□□□□ -0.31
PTPN7-216ENST00000492977 PEX11GQ96HA9 241 aa13.11□□□□□ -0.31
PTPN7-216ENST00000492977 PRRC1Q96M27 445 aa13.11□□□□□ -0.31
PTPN7-216ENST00000492977 SDF2Q99470 211 aa13.11□□□□□ -0.31
PTPN7-216ENST00000492977 ARHGDIGQ99819 225 aa13.11□□□□□ -0.31
PTPN7-216ENST00000492977 FUZQ9BT04 418 aa13.11□□□□□ -0.31
PTPN7-216ENST00000492977 DUSP23Q9BVJ7 150 aa13.11□□□□□ -0.31
PTPN7-216ENST00000492977 FNDC11Q9BVV2 318 aa13.11□□□□□ -0.31
PTPN7-216ENST00000492977 SPRTNQ9H040 489 aaPredicted RBP13.11□□□□□ -0.31
PTPN7-216ENST00000492977 VCX3AQ9NNX9 186 aa13.11□□□□□ -0.31
PTPN7-216ENST00000492977 KLHL28Q9NXS3 571 aa13.11□□□□□ -0.31
PTPN7-216ENST00000492977 NLGN3Q9NZ94 848 aa13.11□□□□□ -0.31
PTPN7-216ENST00000492977 KLHL3Q9UH77 587 aa13.11□□□□□ -0.31
PTPN7-216ENST00000492977 PILRBQ9UKJ0 227 aa13.11□□□□□ -0.31
PTPN7-216ENST00000492977 MGAT4BQ9UQ53 548 aa13.11□□□□□ -0.31
PTPN7-216ENST00000492977 WDR45Q9Y484 360 aa13.11□□□□□ -0.31
PTPN7-216ENST00000492977 MN1Q10571 1320 aaPredicted RBP13.1□□□□□ -0.31
PTPN7-216ENST00000492977 HRO43593 1189 aa13.1□□□□□ -0.31
PTPN7-216ENST00000492977 PCDHGA12O60330 932 aa13.1□□□□□ -0.31
PTPN7-216ENST00000492977 FCMRO60667 390 aa13.1□□□□□ -0.31
PTPN7-216ENST00000492977 NME6O75414 186 aaPredicted RBP13.1□□□□□ -0.31
PTPN7-216ENST00000492977 STX11O75558 287 aa13.1□□□□□ -0.31
PTPN7-216ENST00000492977 ZIC2O95409 532 aaPredicted RBP13.1□□□□□ -0.31
PTPN7-216ENST00000492977 GASTP01350 101 aa13.1□□□□□ -0.31
PTPN7-216ENST00000492977 CT62P0C5K7 136 aa13.1□□□□□ -0.31
PTPN7-216ENST00000492977 JUNBP17275 347 aaPredicted RBP13.1□□□□□ -0.31
PTPN7-216ENST00000492977 FUT4P22083 530 aa13.1□□□□□ -0.31
PTPN7-216ENST00000492977 ARL4DP49703 201 aa13.1□□□□□ -0.31
PTPN7-216ENST00000492977 PIN1Q13526 163 aaPredicted RBP13.1□□□□□ -0.31
PTPN7-216ENST00000492977 COL9A2Q14055 689 aaPredicted RBP13.1□□□□□ -0.31
PTPN7-216ENST00000492977 MAD2L1BPQ15013 274 aaPredicted RBP13.1□□□□□ -0.31
PTPN7-216ENST00000492977 AP1ARQ63HQ0 302 aa13.1□□□□□ -0.31
PTPN7-216ENST00000492977 TYW3Q6IPR3 259 aaKnown RBP13.1□□□□□ -0.31
PTPN7-216ENST00000492977 KCTD8Q6ZWB6 473 aa13.1□□□□□ -0.31
PTPN7-216ENST00000492977 GPR141Q7Z602 305 aa13.1□□□□□ -0.31
PTPN7-216ENST00000492977 VRK2Q86Y07 508 aa13.1□□□□□ -0.31
PTPN7-216ENST00000492977 CNIH3Q8TBE1 160 aa13.1□□□□□ -0.31
PTPN7-216ENST00000492977 TMIGD2Q96BF3 282 aa13.1□□□□□ -0.31
PTPN7-216ENST00000492977 RBM18Q96H35 190 aaKnown RBP13.1□□□□□ -0.31
PTPN7-216ENST00000492977 TSC22D3Q99576 134 aa13.1□□□□□ -0.31
PTPN7-216ENST00000492977 TUBA1CQ9BQE3 449 aa13.1□□□□□ -0.31
PTPN7-216ENST00000492977 ZNF350Q9GZX5 532 aa13.1□□□□□ -0.31
PTPN7-216ENST00000492977 SAP130Q9H0E3 1048 aa13.1□□□□□ -0.31
PTPN7-216ENST00000492977 QRSL1Q9H0R6 528 aaKnown RBP13.1□□□□□ -0.31
PTPN7-216ENST00000492977 CXorf21Q9HAI6 301 aa13.1□□□□□ -0.31
PTPN7-216ENST00000492977 POLE3Q9NRF9 147 aa13.1□□□□□ -0.31
PTPN7-216ENST00000492977 PRTFDC1Q9NRG1 225 aa13.1□□□□□ -0.31
PTPN7-216ENST00000492977 TPRKBQ9Y3C4 175 aa13.1□□□□□ -0.31
PTPN7-216ENST00000492977 PCDHGA6Q9Y5G7 932 aa13.1□□□□□ -0.31
PTPN7-216ENST00000492977 CEPT1Q9Y6K0 416 aa13.1□□□□□ -0.31
PTPN7-216ENST00000492977 SH3PXD2BA1X283 911 aa13.09□□□□□ -0.31
PTPN7-216ENST00000492977 LAMTOR5O43504 91 aa13.09□□□□□ -0.31
PTPN7-216ENST00000492977 CBX7O95931 251 aa13.09□□□□□ -0.31
PTPN7-216ENST00000492977 PDGFBP01127 241 aaPredicted RBP13.09□□□□□ -0.31
PTPN7-216ENST00000492977 THBS1P07996 1170 aa13.09□□□□□ -0.31
PTPN7-216ENST00000492977 MSL3P1P0C860 447 aa13.09□□□□□ -0.31
PTPN7-216ENST00000492977 PNLIPP16233 465 aa13.09□□□□□ -0.31
PTPN7-216ENST00000492977 S1PR1P21453 382 aa13.09□□□□□ -0.31
PTPN7-216ENST00000492977 CD1CP29017 333 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms