RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 PDLIM1O00151 329 aa3.55□□□□□ -1.84
XRN1-213ENST00000489241 HMMRO75330 724 aa3.55□□□□□ -1.84
XRN1-213ENST00000489241 NEBLO76041 1014 aa3.55□□□□□ -1.84
XRN1-213ENST00000489241 TM7SF2O76062 418 aa3.55□□□□□ -1.84
XRN1-213ENST00000489241 KIAA0754O94854 1291 aa3.55□□□□□ -1.84
XRN1-213ENST00000489241 SNX4O95219 450 aa3.55□□□□□ -1.84
XRN1-213ENST00000489241 UGT2B4P06133 528 aa3.55□□□□□ -1.84
XRN1-213ENST00000489241 ADORA3P0DMS8 318 aa3.55□□□□□ -1.84
XRN1-213ENST00000489241 UQCRBP14927 111 aa3.55□□□□□ -1.84
XRN1-213ENST00000489241 UCP1P25874 307 aa3.55□□□□□ -1.84
XRN1-213ENST00000489241 SAA4P35542 130 aa3.55□□□□□ -1.84
XRN1-213ENST00000489241 CHI3L1P36222 383 aaPredicted RBP3.55□□□□□ -1.84
XRN1-213ENST00000489241 RGS4P49798 205 aa3.55□□□□□ -1.84
XRN1-213ENST00000489241 VCPP55072 806 aaKnown RBP3.55□□□□□ -1.84
XRN1-213ENST00000489241 GSCP56915 257 aaPredicted RBP3.55□□□□□ -1.84
XRN1-213ENST00000489241 TPD52L1Q16890 204 aaPredicted RBP3.55□□□□□ -1.84
XRN1-213ENST00000489241 MOGAT2Q3SYC2 334 aa3.55□□□□□ -1.84
XRN1-213ENST00000489241 RABGAP1LQ5R372 815 aa3.55□□□□□ -1.84
XRN1-213ENST00000489241 BEND6Q5SZJ8 279 aaPredicted RBP3.55□□□□□ -1.84
XRN1-213ENST00000489241 LCE1FQ5T754 118 aa3.55□□□□□ -1.84
XRN1-213ENST00000489241 BSPRYQ5W0U4 402 aa3.55□□□□□ -1.84
XRN1-213ENST00000489241 PNCKQ6P2M8 343 aa3.55□□□□□ -1.84
XRN1-213ENST00000489241 GDPGP1Q6ZNW5 385 aa3.55□□□□□ -1.84
XRN1-213ENST00000489241 MOB2Q70IA6 237 aa3.55□□□□□ -1.84
XRN1-213ENST00000489241 ZFAND4Q86XD8 727 aa3.55□□□□□ -1.84
XRN1-213ENST00000489241 ZCCHC7Q8N3Z6 543 aaKnown RBP3.55□□□□□ -1.84
XRN1-213ENST00000489241 SPEM1Q8N4L4 309 aa3.55□□□□□ -1.84
XRN1-213ENST00000489241 ZNF614Q8N883 585 aa3.55□□□□□ -1.84
XRN1-213ENST00000489241 AQP11Q8NBQ7 271 aa3.55□□□□□ -1.84
XRN1-213ENST00000489241 OR5AU1Q8NGC0 362 aa3.55□□□□□ -1.84
XRN1-213ENST00000489241 SSC4DQ8WTU2 575 aa3.55□□□□□ -1.84
XRN1-213ENST00000489241 BIRC7Q96CA5 298 aa3.55□□□□□ -1.84
XRN1-213ENST00000489241 NSMCE3Q96MG7 304 aa3.55□□□□□ -1.84
XRN1-213ENST00000489241 OPRPNQ99935 248 aaPredicted RBP3.55□□□□□ -1.84
XRN1-213ENST00000489241 EDEM2Q9BV94 578 aa3.55□□□□□ -1.84
XRN1-213ENST00000489241 ST6GALNAC5Q9BVH7 336 aa3.55□□□□□ -1.84
XRN1-213ENST00000489241 GSDMCQ9BYG8 508 aa3.55□□□□□ -1.84
XRN1-213ENST00000489241 LIME1Q9H400 295 aa3.55□□□□□ -1.84
XRN1-213ENST00000489241 GPN2Q9H9Y4 310 aaPredicted RBP3.55□□□□□ -1.84
XRN1-213ENST00000489241 RBM28Q9NW13 759 aaKnown RBP3.55□□□□□ -1.84
XRN1-213ENST00000489241 NDE1Q9NXR1 346 aa3.55□□□□□ -1.84
XRN1-213ENST00000489241 KLRF1Q9NZS2 232 aa3.55□□□□□ -1.84
XRN1-213ENST00000489241 ZNF346Q9UL40 294 aaKnown RBP3.55□□□□□ -1.84
XRN1-213ENST00000489241 HPCAL4Q9UM19 191 aa3.55□□□□□ -1.84
XRN1-213ENST00000489241 DDX49Q9Y6V7 483 aaKnown RBP3.55□□□□□ -1.84
XRN1-213ENST00000489241 IGLV7-46A0A075B6I9 117 aa3.54□□□□□ -1.84
XRN1-213ENST00000489241 MEX3AA1L020 520 aaKnown RBP3.54□□□□□ -1.84
XRN1-213ENST00000489241 ZSCAN5CA6NGD5 496 aaPredicted RBP3.54□□□□□ -1.84
XRN1-213ENST00000489241 PPIAL4DF5H284 164 aa3.54□□□□□ -1.84
XRN1-213ENST00000489241 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.54□□□□□ -1.84
XRN1-213ENST00000489241 CLDN5O00501 218 aa3.54□□□□□ -1.84
XRN1-213ENST00000489241 CXCL11O14625 94 aa3.54□□□□□ -1.84
XRN1-213ENST00000489241 TFECO14948 347 aaPredicted RBP3.54□□□□□ -1.84
XRN1-213ENST00000489241 CTAGE5O15320 804 aa3.54□□□□□ -1.84
XRN1-213ENST00000489241 GPRIN2O60269 458 aa3.54□□□□□ -1.84
XRN1-213ENST00000489241 SNAP91O60641 907 aa3.54□□□□□ -1.84
XRN1-213ENST00000489241 PALMO75781 387 aa3.54□□□□□ -1.84
XRN1-213ENST00000489241 RHOBTB1O94844 696 aa3.54□□□□□ -1.84
XRN1-213ENST00000489241 IGHG1P01857 330 aa3.54□□□□□ -1.84
XRN1-213ENST00000489241 MT-ND1P03886 318 aa3.54□□□□□ -1.84
XRN1-213ENST00000489241 OR9G9P0C7N8 305 aa3.54□□□□□ -1.84
XRN1-213ENST00000489241 TMEM50BP56557 158 aa3.54□□□□□ -1.84
XRN1-213ENST00000489241 KRTAP10-12P60413 245 aa3.54□□□□□ -1.84
XRN1-213ENST00000489241 IRX1P78414 480 aaPredicted RBP3.54□□□□□ -1.84
XRN1-213ENST00000489241 FKBP3Q00688 224 aaKnown RBP3.54□□□□□ -1.84
XRN1-213ENST00000489241 ZNF85Q03923 595 aa3.54□□□□□ -1.84
XRN1-213ENST00000489241 RIPK1Q13546 671 aa3.54□□□□□ -1.84
XRN1-213ENST00000489241 SELPLGQ14242 412 aa3.54□□□□□ -1.84
XRN1-213ENST00000489241 ZNF146Q15072 292 aa3.54□□□□□ -1.84
XRN1-213ENST00000489241 CD226Q15762 336 aa3.54□□□□□ -1.84
XRN1-213ENST00000489241 CAMK4Q16566 473 aa3.54□□□□□ -1.84
XRN1-213ENST00000489241 LRRC23Q53EV4 343 aaPredicted RBP3.54□□□□□ -1.84
XRN1-213ENST00000489241 ZC2HC1BQ5TFG8 222 aa3.54□□□□□ -1.84
XRN1-213ENST00000489241 FAAP20Q6NZ36 180 aa3.54□□□□□ -1.84
XRN1-213ENST00000489241 BLOC1S2Q6QNY1 142 aa3.54□□□□□ -1.84
XRN1-213ENST00000489241 HACD2Q6Y1H2 254 aa3.54□□□□□ -1.84
XRN1-213ENST00000489241 TMEM184AQ6ZMB5 413 aa3.54□□□□□ -1.84
XRN1-213ENST00000489241 ADAMTSL5Q6ZMM2 481 aa3.54□□□□□ -1.84
XRN1-213ENST00000489241 NUFIP2Q7Z417 695 aaKnown RBP3.54□□□□□ -1.84
XRN1-213ENST00000489241 METTL4Q8N3J2 472 aa3.54□□□□□ -1.84
XRN1-213ENST00000489241 OR1B1Q8NGR6 318 aa3.54□□□□□ -1.84
XRN1-213ENST00000489241 PNPT1Q8TCS8 783 aaKnown RBP3.54□□□□□ -1.84
XRN1-213ENST00000489241 RLN3Q8WXF3 142 aa3.54□□□□□ -1.84
XRN1-213ENST00000489241 ART4Q93070 314 aa3.54□□□□□ -1.84
XRN1-213ENST00000489241 UPRTQ96BW1 309 aa3.54□□□□□ -1.84
XRN1-213ENST00000489241 DHTKD1Q96HY7 919 aaPredicted RBP3.54□□□□□ -1.84
XRN1-213ENST00000489241 SENP8Q96LD8 212 aa3.54□□□□□ -1.84
XRN1-213ENST00000489241 AGAP4Q96P64 663 aa3.54□□□□□ -1.84
XRN1-213ENST00000489241 LGMNQ99538 433 aa3.54□□□□□ -1.84
XRN1-213ENST00000489241 C19orf43Q9BQ61 176 aa3.54□□□□□ -1.84
XRN1-213ENST00000489241 RPP25Q9BUL9 199 aaKnown RBP3.54□□□□□ -1.84
XRN1-213ENST00000489241 TBC1D10AQ9BXI6 508 aa3.54□□□□□ -1.84
XRN1-213ENST00000489241 PUS3Q9BZE2 481 aaKnown RBP3.54□□□□□ -1.84
XRN1-213ENST00000489241 DHX33Q9H6R0 707 aaKnown RBP3.54□□□□□ -1.84
XRN1-213ENST00000489241 IL1RL2Q9HB29 575 aa3.54□□□□□ -1.84
XRN1-213ENST00000489241 DCAF13Q9NV06 445 aaKnown RBP3.54□□□□□ -1.84
XRN1-213ENST00000489241 DUS2Q9NX74 493 aaKnown RBP3.54□□□□□ -1.84
XRN1-213ENST00000489241 COX16Q9P0S2 106 aa3.54□□□□□ -1.84
XRN1-213ENST00000489241 RNF6Q9Y252 685 aa3.54□□□□□ -1.84
XRN1-213ENST00000489241 MRPS33Q9Y291 106 aaKnown RBP3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms