RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 GIMAP2Q9UG22 337 aa13.11□□□□□ -0.31
BRCA1-218ENST00000489037 MAPRE3Q9UPY8 281 aa13.11□□□□□ -0.31
BRCA1-218ENST00000489037 NCKAP5O14513 1909 aa13.11□□□□□ -0.31
BRCA1-218ENST00000489037 TRGV5A0A0B4J1U4 118 aa13.1□□□□□ -0.31
BRCA1-218ENST00000489037 OR14I1A6ND48 311 aa13.1□□□□□ -0.31
BRCA1-218ENST00000489037 OR6C70A6NIJ9 312 aa13.1□□□□□ -0.31
BRCA1-218ENST00000489037 BCKDKO14874 412 aa13.1□□□□□ -0.31
BRCA1-218ENST00000489037 SUSD5O60279 629 aa13.1□□□□□ -0.31
BRCA1-218ENST00000489037 HCN1O60741 890 aa13.1□□□□□ -0.31
BRCA1-218ENST00000489037 IGHG3P01860 377 aa13.1□□□□□ -0.31
BRCA1-218ENST00000489037 RNF224P0DH78 156 aa13.1□□□□□ -0.31
BRCA1-218ENST00000489037 CT45A8P0DMV1 189 aa13.1□□□□□ -0.31
BRCA1-218ENST00000489037 CT45A9P0DMV2 189 aa13.1□□□□□ -0.31
BRCA1-218ENST00000489037 SNTA1Q13424 505 aa13.1□□□□□ -0.31
BRCA1-218ENST00000489037 PDE7AQ13946 482 aa13.1□□□□□ -0.31
BRCA1-218ENST00000489037 TOMM20Q15388 145 aa13.1□□□□□ -0.31
BRCA1-218ENST00000489037 SMU1Q2TAY7 513 aa13.1□□□□□ -0.31
BRCA1-218ENST00000489037 CT45A2Q5DJT8 189 aa13.1□□□□□ -0.31
BRCA1-218ENST00000489037 CPTPQ5TA50 214 aa13.1□□□□□ -0.31
BRCA1-218ENST00000489037 AGBL2Q5U5Z8 902 aa13.1□□□□□ -0.31
BRCA1-218ENST00000489037 TMEM211Q6ICI0 200 aa13.1□□□□□ -0.31
BRCA1-218ENST00000489037 LARP4Q71RC2 724 aaKnown RBP eCLIP13.1□□□□□ -0.31
BRCA1-218ENST00000489037 ZNF551Q7Z340 670 aaPredicted RBP13.1□□□□□ -0.31
BRCA1-218ENST00000489037 CD163Q86VB7 1156 aa13.1□□□□□ -0.31
BRCA1-218ENST00000489037 DOLPP1Q86YN1 238 aa13.1□□□□□ -0.31
BRCA1-218ENST00000489037 OR2L13Q8N349 312 aa13.1□□□□□ -0.31
BRCA1-218ENST00000489037 CIDECQ96AQ7 238 aaPredicted RBP13.1□□□□□ -0.31
BRCA1-218ENST00000489037 SARAFQ96BY9 339 aa13.1□□□□□ -0.31
BRCA1-218ENST00000489037 CCDC120Q96HB5 630 aa13.1□□□□□ -0.31
BRCA1-218ENST00000489037 PPP1R36Q96LQ0 422 aa13.1□□□□□ -0.31
BRCA1-218ENST00000489037 ZNF395Q9H8N7 513 aaPredicted RBP13.1□□□□□ -0.31
BRCA1-218ENST00000489037 PROK2Q9HC23 129 aa13.1□□□□□ -0.31
BRCA1-218ENST00000489037 Q9N2J8 555 aa13.1□□□□□ -0.31
BRCA1-218ENST00000489037 NOP53Q9NZM5 478 aaKnown RBP13.1□□□□□ -0.31
BRCA1-218ENST00000489037 ATP6V1HQ9UI12 483 aa13.1□□□□□ -0.31
BRCA1-218ENST00000489037 MEMO1Q9Y316 297 aa13.1□□□□□ -0.31
BRCA1-218ENST00000489037 PHF3Q92576 2039 aaKnown RBP13.1□□□□□ -0.31
BRCA1-218ENST00000489037 NPIPA2E9PIF3 369 aa13.09□□□□□ -0.31
BRCA1-218ENST00000489037 E9PLN8 166 aa13.09□□□□□ -0.31
BRCA1-218ENST00000489037 NPIPA3F8WFD2 350 aa13.09□□□□□ -0.31
BRCA1-218ENST00000489037 UPK1AO00322 258 aa13.09□□□□□ -0.31
BRCA1-218ENST00000489037 AQP7O14520 342 aa13.09□□□□□ -0.31
BRCA1-218ENST00000489037 SCAMP2O15127 329 aaKnown RBP13.09□□□□□ -0.31
BRCA1-218ENST00000489037 UGT2B11O75310 529 aa13.09□□□□□ -0.31
BRCA1-218ENST00000489037 TRIM3O75382 744 aaPredicted RBP13.09□□□□□ -0.31
BRCA1-218ENST00000489037 TRAPPC6AO75865 159 aa13.09□□□□□ -0.31
BRCA1-218ENST00000489037 PRPS1L1P21108 318 aa13.09□□□□□ -0.31
BRCA1-218ENST00000489037 ELAVL4P26378 380 aaKnown RBP13.09□□□□□ -0.31
BRCA1-218ENST00000489037 PNLIPRP2P54317 469 aa13.09□□□□□ -0.31
BRCA1-218ENST00000489037 PRKAG1P54619 331 aa13.09□□□□□ -0.31
BRCA1-218ENST00000489037 PSMD4P55036 377 aaKnown RBP13.09□□□□□ -0.31
BRCA1-218ENST00000489037 CORO7P57737 925 aa13.09□□□□□ -0.31
BRCA1-218ENST00000489037 EMX2Q04743 252 aa13.09□□□□□ -0.31
BRCA1-218ENST00000489037 BST1Q10588 318 aa13.09□□□□□ -0.31
BRCA1-218ENST00000489037 DECR1Q16698 335 aa13.09□□□□□ -0.31
BRCA1-218ENST00000489037 LSM12Q3MHD2 195 aaKnown RBP13.09□□□□□ -0.31
BRCA1-218ENST00000489037 VPS26BQ4G0F5 336 aa13.09□□□□□ -0.31
BRCA1-218ENST00000489037 CYP27C1Q4G0S4 372 aa13.09□□□□□ -0.31
BRCA1-218ENST00000489037 CES4AQ5XG92 561 aa13.09□□□□□ -0.31
BRCA1-218ENST00000489037 TMEM81Q6P7N7 255 aa13.09□□□□□ -0.31
BRCA1-218ENST00000489037 XKRXQ6PP77 449 aa13.09□□□□□ -0.31
BRCA1-218ENST00000489037 TRILQ7L0X0 811 aa13.09□□□□□ -0.31
BRCA1-218ENST00000489037 SZRD1Q7Z422 152 aa13.09□□□□□ -0.31
BRCA1-218ENST00000489037 MRGPRGQ86SM5 289 aa13.09□□□□□ -0.31
BRCA1-218ENST00000489037 ZNF808Q8N4W9 903 aaPredicted RBP13.09□□□□□ -0.31
BRCA1-218ENST00000489037 OR1J4Q8NGS1 313 aa13.09□□□□□ -0.31
BRCA1-218ENST00000489037 RAB3IL1Q8TBN0 382 aa13.09□□□□□ -0.31
BRCA1-218ENST00000489037 HGDQ93099 445 aa13.09□□□□□ -0.31
BRCA1-218ENST00000489037 TLCD1Q96CP7 247 aa13.09□□□□□ -0.31
BRCA1-218ENST00000489037 SLC35A4Q96G79 324 aa13.09□□□□□ -0.31
BRCA1-218ENST00000489037 TMEM41AQ96HV5 264 aa13.09□□□□□ -0.31
BRCA1-218ENST00000489037 ADOQ96SZ5 270 aa13.09□□□□□ -0.31
BRCA1-218ENST00000489037 SORT1Q99523 831 aa13.09□□□□□ -0.31
BRCA1-218ENST00000489037 VKORC1Q9BQB6 163 aa13.09□□□□□ -0.31
BRCA1-218ENST00000489037 OSBPL11Q9BXB4 747 aa13.09□□□□□ -0.31
BRCA1-218ENST00000489037 TP63Q9H3D4 680 aaPredicted RBP13.09□□□□□ -0.31
BRCA1-218ENST00000489037 ZNF703Q9H7S9 590 aaPredicted RBP13.09□□□□□ -0.31
BRCA1-218ENST00000489037 THAP1Q9NVV9 213 aa13.09□□□□□ -0.31
BRCA1-218ENST00000489037 ACAD8Q9UKU7 415 aa13.09□□□□□ -0.31
BRCA1-218ENST00000489037 NCOA6Q14686 2063 aaPredicted RBP13.08□□□□□ -0.32
BRCA1-218ENST00000489037 A0A1B0GVC2 190 aa13.08□□□□□ -0.32
BRCA1-218ENST00000489037 A0A1W2PRB8 838 aa13.08□□□□□ -0.32
BRCA1-218ENST00000489037 PRAMEF25A6NGN4 478 aa13.08□□□□□ -0.32
BRCA1-218ENST00000489037 GNB5O14775 395 aa13.08□□□□□ -0.32
BRCA1-218ENST00000489037 ZNHIT1O43257 154 aa13.08□□□□□ -0.32
BRCA1-218ENST00000489037 EMC8O43402 210 aa13.08□□□□□ -0.32
BRCA1-218ENST00000489037 GCKP35557 465 aa13.08□□□□□ -0.32
BRCA1-218ENST00000489037 CLK3P49761 638 aaKnown RBP13.08□□□□□ -0.32
BRCA1-218ENST00000489037 WDR4P57081 412 aaKnown RBP13.08□□□□□ -0.32
BRCA1-218ENST00000489037 PRR5P85299 388 aa13.08□□□□□ -0.32
BRCA1-218ENST00000489037 PTGR1Q14914 329 aa13.08□□□□□ -0.32
BRCA1-218ENST00000489037 ZNF385BQ569K4 471 aa13.08□□□□□ -0.32
BRCA1-218ENST00000489037 WLSQ5T9L3 541 aa13.08□□□□□ -0.32
BRCA1-218ENST00000489037 BICRALQ6AI39 1079 aa13.08□□□□□ -0.32
BRCA1-218ENST00000489037 TIGD3Q6B0B8 471 aa13.08□□□□□ -0.32
BRCA1-218ENST00000489037 ANGPTL8Q6UXH0 198 aa13.08□□□□□ -0.32
BRCA1-218ENST00000489037 HDXQ7Z353 690 aa13.08□□□□□ -0.32
BRCA1-218ENST00000489037 FGD2Q7Z6J4 655 aa13.08□□□□□ -0.32
BRCA1-218ENST00000489037 CHERPQ8IWX8 916 aaKnown RBP13.08□□□□□ -0.32
BRCA1-218ENST00000489037 NUP43Q8NFH3 380 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms