RNA–Protein interactions for RNA: ENST00000483344.1

FNDC3B-210, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 3

Gene FNDC3B, Length 666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-210ENST00000483344 SNRPCP09234 159 aaKnown RBP3.47□□□□□ -1.85
FNDC3B-210ENST00000483344 ZCCHC18P0CG32 403 aa3.47□□□□□ -1.85
FNDC3B-210ENST00000483344 FOLR2P14207 255 aa3.47□□□□□ -1.85
FNDC3B-210ENST00000483344 CCNA2P20248 432 aa3.47□□□□□ -1.85
FNDC3B-210ENST00000483344 PRDX2P32119 198 aa3.47□□□□□ -1.85
FNDC3B-210ENST00000483344 SAA4P35542 130 aa3.47□□□□□ -1.85
FNDC3B-210ENST00000483344 BRCC3P46736 316 aa3.47□□□□□ -1.85
FNDC3B-210ENST00000483344 MFAP2P55001 183 aa3.47□□□□□ -1.85
FNDC3B-210ENST00000483344 VCPP55072 806 aaKnown RBP3.47□□□□□ -1.85
FNDC3B-210ENST00000483344 RAG2P55895 527 aa3.47□□□□□ -1.85
FNDC3B-210ENST00000483344 BNIP1Q12981 228 aa3.47□□□□□ -1.85
FNDC3B-210ENST00000483344 PDIA5Q14554 519 aa3.47□□□□□ -1.85
FNDC3B-210ENST00000483344 ZKSCAN8Q15776 578 aaPredicted RBP3.47□□□□□ -1.85
FNDC3B-210ENST00000483344 ZSWIM7Q19AV6 140 aa3.47□□□□□ -1.85
FNDC3B-210ENST00000483344 C17orf58Q2M2W7 97 aa3.47□□□□□ -1.85
FNDC3B-210ENST00000483344 ACSF3Q4G176 576 aaPredicted RBP3.47□□□□□ -1.85
FNDC3B-210ENST00000483344 C14orf28Q4W4Y0 310 aa3.47□□□□□ -1.85
FNDC3B-210ENST00000483344 ACER2Q5QJU3 275 aa3.47□□□□□ -1.85
FNDC3B-210ENST00000483344 LINC00242Q5T6M2 205 aa3.47□□□□□ -1.85
FNDC3B-210ENST00000483344 ATRAIDQ6UW56 229 aa3.47□□□□□ -1.85
FNDC3B-210ENST00000483344 STOX1Q6ZVD7 989 aa3.47□□□□□ -1.85
FNDC3B-210ENST00000483344 ZSCAN30Q86W11 494 aa3.47□□□□□ -1.85
FNDC3B-210ENST00000483344 FAM71CQ8NEG0 241 aa3.47□□□□□ -1.85
FNDC3B-210ENST00000483344 OR56B1Q8NGI3 324 aa3.47□□□□□ -1.85
FNDC3B-210ENST00000483344 LHX4Q969G2 390 aa3.47□□□□□ -1.85
FNDC3B-210ENST00000483344 RAB3CQ96E17 227 aa3.47□□□□□ -1.85
FNDC3B-210ENST00000483344 FAM173AQ9BQD7 235 aa3.47□□□□□ -1.85
FNDC3B-210ENST00000483344 RPP25Q9BUL9 199 aaKnown RBP3.47□□□□□ -1.85
FNDC3B-210ENST00000483344 APOOQ9BUR5 198 aa3.47□□□□□ -1.85
FNDC3B-210ENST00000483344 AMBNQ9NP70 447 aa3.47□□□□□ -1.85
FNDC3B-210ENST00000483344 ZNF446Q9NWS9 450 aa3.47□□□□□ -1.85
FNDC3B-210ENST00000483344 MLXQ9UH92 298 aa3.47□□□□□ -1.85
FNDC3B-210ENST00000483344 FKBP7Q9Y680 259 aa3.47□□□□□ -1.85
FNDC3B-210ENST00000483344 PCNX3Q9H6A9 2034 aa3.47□□□□□ -1.85
FNDC3B-210ENST00000483344 PREX2Q70Z35 1606 aa3.47□□□□□ -1.85
FNDC3B-210ENST00000483344 TNRQ92752 1358 aa3.47□□□□□ -1.85
FNDC3B-210ENST00000483344 CACNA1FO60840 1977 aa3.47□□□□□ -1.85
FNDC3B-210ENST00000483344 SUPT6HQ7KZ85 1726 aaKnown RBP3.47□□□□□ -1.85
FNDC3B-210ENST00000483344 COL5A2P05997 1499 aaPredicted RBP3.47□□□□□ -1.85
FNDC3B-210ENST00000483344 PZPP20742 1482 aa3.47□□□□□ -1.85
FNDC3B-210ENST00000483344 CDK12Q9NYV4 1490 aaPredicted RBP3.47□□□□□ -1.85
FNDC3B-210ENST00000483344 INO80Q9ULG1 1556 aaPredicted RBP3.46□□□□□ -1.85
FNDC3B-210ENST00000483344 MIA2Q96PC5 1412 aa3.46□□□□□ -1.86
FNDC3B-210ENST00000483344 BICDL2A1A5D9 508 aa3.46□□□□□ -1.86
FNDC3B-210ENST00000483344 TRIM49BA6NDI0 452 aa3.46□□□□□ -1.86
FNDC3B-210ENST00000483344 ZNF487B1APH4 448 aa3.46□□□□□ -1.86
FNDC3B-210ENST00000483344 E2F3O00716 465 aa3.46□□□□□ -1.86
FNDC3B-210ENST00000483344 RANBP6O60518 1105 aaKnown RBP3.46□□□□□ -1.86
FNDC3B-210ENST00000483344 CYP11B1P15538 503 aa3.46□□□□□ -1.86
FNDC3B-210ENST00000483344 GATA2P23769 480 aaPredicted RBP3.46□□□□□ -1.86
FNDC3B-210ENST00000483344 RPA1P27694 616 aa3.46□□□□□ -1.86
FNDC3B-210ENST00000483344 PTPN4P29074 926 aa3.46□□□□□ -1.86
FNDC3B-210ENST00000483344 ELK3P41970 407 aa3.46□□□□□ -1.86
FNDC3B-210ENST00000483344 PTGER3P43115 390 aa3.46□□□□□ -1.86
FNDC3B-210ENST00000483344 GMFBP60983 142 aa3.46□□□□□ -1.86
FNDC3B-210ENST00000483344 HERVK_113P63132 956 aa3.46□□□□□ -1.86
FNDC3B-210ENST00000483344 ERVK-8P63133 956 aa3.46□□□□□ -1.86
FNDC3B-210ENST00000483344 NOP14P78316 857 aaKnown RBP3.46□□□□□ -1.86
FNDC3B-210ENST00000483344 GABPB1Q06547 395 aaPredicted RBP3.46□□□□□ -1.86
FNDC3B-210ENST00000483344 ABRAXAS2Q15018 415 aa3.46□□□□□ -1.86
FNDC3B-210ENST00000483344 KARSQ15046 597 aaKnown RBP3.46□□□□□ -1.86
FNDC3B-210ENST00000483344 SLC1A5Q15758 541 aa3.46□□□□□ -1.86
FNDC3B-210ENST00000483344 CD226Q15762 336 aa3.46□□□□□ -1.86
FNDC3B-210ENST00000483344 PARP6Q2NL67 630 aa3.46□□□□□ -1.86
FNDC3B-210ENST00000483344 ZNF699Q32M78 642 aa3.46□□□□□ -1.86
FNDC3B-210ENST00000483344 TCTEX1D4Q5JR98 221 aa3.46□□□□□ -1.86
FNDC3B-210ENST00000483344 FAM219BQ5XKK7 198 aa3.46□□□□□ -1.86
FNDC3B-210ENST00000483344 RAET1GQ6H3X3 334 aa3.46□□□□□ -1.86
FNDC3B-210ENST00000483344 IRGCQ6NXR0 463 aa3.46□□□□□ -1.86
FNDC3B-210ENST00000483344 VPS36Q86VN1 386 aa3.46□□□□□ -1.86
FNDC3B-210ENST00000483344 ANKRD20A12PQ8NF67 263 aa3.46□□□□□ -1.86
FNDC3B-210ENST00000483344 OR52J3Q8NH60 311 aa3.46□□□□□ -1.86
FNDC3B-210ENST00000483344 WDR36Q8NI36 951 aaKnown RBP3.46□□□□□ -1.86
FNDC3B-210ENST00000483344 FCGR1BQ92637 280 aa3.46□□□□□ -1.86
FNDC3B-210ENST00000483344 NCLNQ969V3 563 aa3.46□□□□□ -1.86
FNDC3B-210ENST00000483344 WRAP53Q9BUR4 548 aaKnown RBP3.46□□□□□ -1.86
FNDC3B-210ENST00000483344 ERVK-6Q9BXR3 956 aa3.46□□□□□ -1.86
FNDC3B-210ENST00000483344 ALG9Q9H6U8 611 aa3.46□□□□□ -1.86
FNDC3B-210ENST00000483344 SOHLH2Q9NX45 425 aa3.46□□□□□ -1.86
FNDC3B-210ENST00000483344 ZNF581Q9P0T4 197 aa3.46□□□□□ -1.86
FNDC3B-210ENST00000483344 RCOR3Q9P2K3 495 aaPredicted RBP3.46□□□□□ -1.86
FNDC3B-210ENST00000483344 PURGQ9UJV8 347 aaKnown RBP3.46□□□□□ -1.86
FNDC3B-210ENST00000483344 RNF24Q9Y225 148 aa3.46□□□□□ -1.86
FNDC3B-210ENST00000483344 CLCA3PQ9Y6N3 262 aa3.46□□□□□ -1.86
FNDC3B-210ENST00000483344 NLRP1Q9C000 1473 aa3.46□□□□□ -1.86
FNDC3B-210ENST00000483344 UGGT1Q9NYU2 1555 aa3.46□□□□□ -1.86
FNDC3B-210ENST00000483344 ROBO1Q9Y6N7 1651 aa3.46□□□□□ -1.86
FNDC3B-210ENST00000483344 UTRNP46939 3433 aa3.45□□□□□ -1.86
FNDC3B-210ENST00000483344 RGS12O14924 1447 aa3.45□□□□□ -1.86
FNDC3B-210ENST00000483344 EP400Q96L91 3159 aa3.45□□□□□ -1.86
FNDC3B-210ENST00000483344 ATP7AQ04656 1500 aa3.45□□□□□ -1.86
FNDC3B-210ENST00000483344 SYCP2Q9BX26 1530 aa3.45□□□□□ -1.86
FNDC3B-210ENST00000483344 COL16A1Q07092 1604 aaPredicted RBP3.45□□□□□ -1.86
FNDC3B-210ENST00000483344 IGKV3D-20A0A0C4DH25 116 aa3.45□□□□□ -1.86
FNDC3B-210ENST00000483344 SRRM5B3KS81 715 aa3.45□□□□□ -1.86
FNDC3B-210ENST00000483344 E9PAM4 449 aa3.45□□□□□ -1.86
FNDC3B-210ENST00000483344 PHF1O43189 567 aaPredicted RBP3.45□□□□□ -1.86
FNDC3B-210ENST00000483344 LRRTM2O43300 516 aa3.45□□□□□ -1.86
FNDC3B-210ENST00000483344 GHRP10912 638 aa3.45□□□□□ -1.86
FNDC3B-210ENST00000483344 RPL34P49207 117 aaKnown RBP3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms