RNA–Protein interactions for RNA: ENST00000483344.1

FNDC3B-210, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 3

Gene FNDC3B, Length 666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-210ENST00000483344 AEBP2Q6ZN18 517 aaPredicted RBP21.46■■□□□ 1.03
FNDC3B-210ENST00000483344 CHIC1Q5VXU3 224 aa20.31■□□□□ 0.84
FNDC3B-210ENST00000483344 SENP3Q9H4L4 574 aaPredicted RBP18.18■□□□□ 0.5
FNDC3B-210ENST00000483344 PHF23Q9BUL5 403 aaPredicted RBP17.99■□□□□ 0.47
FNDC3B-210ENST00000483344 FOXD1Q16676 465 aa17.05■□□□□ 0.32
FNDC3B-210ENST00000483344 PLPPR3Q6T4P5 718 aa16.65■□□□□ 0.26
FNDC3B-210ENST00000483344 PPP6R1Q9UPN7 881 aa15.93■□□□□ 0.14
FNDC3B-210ENST00000483344 PIAS4Q8N2W9 510 aaPredicted RBP15.88■□□□□ 0.13
FNDC3B-210ENST00000483344 MSH5O43196 834 aa15.87■□□□□ 0.13
FNDC3B-210ENST00000483344 ADRA2BP18089 450 aa15.86■□□□□ 0.13
FNDC3B-210ENST00000483344 POTEDQ86YR6 584 aa15.71■□□□□ 0.11
FNDC3B-210ENST00000483344 KCNA4P22459 653 aa14.71□□□□□ -0.05
FNDC3B-210ENST00000483344 PPP4R3CPQ6ZMV5 832 aa14.7□□□□□ -0.06
FNDC3B-210ENST00000483344 MAPK8IP2Q13387 824 aaPredicted RBP14.61□□□□□ -0.07
FNDC3B-210ENST00000483344 DMRT2Q9Y5R5 561 aa14.44□□□□□ -0.1
FNDC3B-210ENST00000483344 NCBP3Q53F19 620 aaKnown RBP14.43□□□□□ -0.1
FNDC3B-210ENST00000483344 SCAF1Q9H7N4 1312 aaKnown RBP14.39□□□□□ -0.11
FNDC3B-210ENST00000483344 CNKSR2Q8WXI2 1034 aa14.23□□□□□ -0.13
FNDC3B-210ENST00000483344 NPM3O75607 178 aaKnown RBP14.19□□□□□ -0.14
FNDC3B-210ENST00000483344 SLC4A1APQ9BWU0 796 aaKnown RBP14.08□□□□□ -0.16
FNDC3B-210ENST00000483344 EHMT2Q96KQ7 1210 aa14.03□□□□□ -0.16
FNDC3B-210ENST00000483344 DCAF8L1A6NGE4 600 aa13.88□□□□□ -0.19
FNDC3B-210ENST00000483344 HOXD11P31277 338 aaPredicted RBP13.87□□□□□ -0.19
FNDC3B-210ENST00000483344 RNF216Q9NWF9 866 aaPredicted RBP13.87□□□□□ -0.19
FNDC3B-210ENST00000483344 DNAJC5BQ9UF47 199 aa13.73□□□□□ -0.21
FNDC3B-210ENST00000483344 CACNB1Q02641 598 aaPredicted RBP13.72□□□□□ -0.21
FNDC3B-210ENST00000483344 CSRNP3Q8WYN3 585 aa13.72□□□□□ -0.21
FNDC3B-210ENST00000483344 RNF39Q9H2S5 420 aa13.6□□□□□ -0.23
FNDC3B-210ENST00000483344 ZBTB22O15209 634 aa13.53□□□□□ -0.24
FNDC3B-210ENST00000483344 FOXD4L1Q9NU39 408 aa13.46□□□□□ -0.25
FNDC3B-210ENST00000483344 C1QBPQ07021 282 aaKnown RBP13.33□□□□□ -0.28
FNDC3B-210ENST00000483344 SLC4A2P04920 1241 aa13.31□□□□□ -0.28
FNDC3B-210ENST00000483344 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.21□□□□□ -0.29
FNDC3B-210ENST00000483344 MYCNP04198 464 aaPredicted RBP13.12□□□□□ -0.31
FNDC3B-210ENST00000483344 U3KPZ7 1027 aaPredicted RBP12.99□□□□□ -0.33
FNDC3B-210ENST00000483344 ATXN8OSP0DMR3 200 aa12.97□□□□□ -0.33
FNDC3B-210ENST00000483344 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.89□□□□□ -0.35
FNDC3B-210ENST00000483344 HNRNPUL2Q1KMD3 747 aaKnown RBP12.89□□□□□ -0.35
FNDC3B-210ENST00000483344 SAMD1Q6SPF0 538 aaPredicted RBP12.85□□□□□ -0.35
FNDC3B-210ENST00000483344 SPINK5Q9NQ38 1064 aaPredicted RBP12.85□□□□□ -0.35
FNDC3B-210ENST00000483344 CAPN15O75808 1086 aa12.77□□□□□ -0.37
FNDC3B-210ENST00000483344 DSG3P32926 999 aa12.72□□□□□ -0.37
FNDC3B-210ENST00000483344 ATF5Q9Y2D1 282 aaPredicted RBP12.72□□□□□ -0.37
FNDC3B-210ENST00000483344 APLP2Q06481 763 aa12.68□□□□□ -0.38
FNDC3B-210ENST00000483344 TRHP20396 242 aaPredicted RBP12.57□□□□□ -0.4
FNDC3B-210ENST00000483344 ABCB7O75027 752 aa12.53□□□□□ -0.4
FNDC3B-210ENST00000483344 ZNF219Q9P2Y4 722 aaPredicted RBP12.51□□□□□ -0.41
FNDC3B-210ENST00000483344 FKBP8Q14318 412 aa12.4□□□□□ -0.42
FNDC3B-210ENST00000483344 POLA2Q14181 598 aa12.29□□□□□ -0.44
FNDC3B-210ENST00000483344 POTEHQ6S545 545 aa12.27□□□□□ -0.45
FNDC3B-210ENST00000483344 FBLN2P98095 1184 aa12.21□□□□□ -0.45
FNDC3B-210ENST00000483344 MKRN4PQ13434 485 aaPredicted RBP12.18□□□□□ -0.46
FNDC3B-210ENST00000483344 ZBTB12Q9Y330 459 aaPredicted RBP12.13□□□□□ -0.47
FNDC3B-210ENST00000483344 SPDYE4A6NLX3 237 aa12.09□□□□□ -0.47
FNDC3B-210ENST00000483344 RBM42Q9BTD8 480 aaKnown RBP12.04□□□□□ -0.48
FNDC3B-210ENST00000483344 PROM2Q8N271 834 aa11.92□□□□□ -0.5
FNDC3B-210ENST00000483344 FBXO3Q9UK99 471 aa11.9□□□□□ -0.5
FNDC3B-210ENST00000483344 CHRDL2Q6WN34 429 aa11.89□□□□□ -0.51
FNDC3B-210ENST00000483344 AMER1Q5JTC6 1135 aaPredicted RBP11.87□□□□□ -0.51
FNDC3B-210ENST00000483344 OSCARQ8IYS5 282 aa11.85□□□□□ -0.51
FNDC3B-210ENST00000483344 ZNF692Q9BU19 519 aaPredicted RBP11.82□□□□□ -0.52
FNDC3B-210ENST00000483344 RTN4Q9NQC3 1192 aaKnown RBP11.82□□□□□ -0.52
FNDC3B-210ENST00000483344 SPDYE2BA6NHP3 402 aa11.81□□□□□ -0.52
FNDC3B-210ENST00000483344 SPDYE6P0CI01 402 aa11.81□□□□□ -0.52
FNDC3B-210ENST00000483344 SPDYE2Q495Y8 402 aa11.81□□□□□ -0.52
FNDC3B-210ENST00000483344 AKT1S1Q96B36 256 aa11.78□□□□□ -0.52
FNDC3B-210ENST00000483344 SSUH2Q9Y2M2 353 aa11.74□□□□□ -0.53
FNDC3B-210ENST00000483344 REM2Q8IYK8 340 aaPredicted RBP11.73□□□□□ -0.53
FNDC3B-210ENST00000483344 VASPP50552 380 aaPredicted RBP11.7□□□□□ -0.54
FNDC3B-210ENST00000483344 PABPN1Q86U42 306 aaKnown RBP eCLIP11.66□□□□□ -0.54
FNDC3B-210ENST00000483344 PITPNM1O00562 1244 aa11.63□□□□□ -0.55
FNDC3B-210ENST00000483344 PIP4P2Q8N4L2 257 aa11.61□□□□□ -0.55
FNDC3B-210ENST00000483344 STAG3Q9UJ98 1225 aa11.59□□□□□ -0.55
FNDC3B-210ENST00000483344 IFNLR1Q8IU57 520 aaPredicted RBP11.56□□□□□ -0.56
FNDC3B-210ENST00000483344 FXR2P51116 673 aaKnown RBP eCLIP11.5□□□□□ -0.57
FNDC3B-210ENST00000483344 PLCD3Q8N3E9 789 aa11.47□□□□□ -0.57
FNDC3B-210ENST00000483344 SP7Q8TDD2 431 aaPredicted RBP11.46□□□□□ -0.57
FNDC3B-210ENST00000483344 KLHL34Q8N239 644 aa11.45□□□□□ -0.58
FNDC3B-210ENST00000483344 MIER1Q8N108 512 aa11.44□□□□□ -0.58
FNDC3B-210ENST00000483344 HAX1O00165 279 aa11.4□□□□□ -0.58
FNDC3B-210ENST00000483344 PLEKHG5O94827 1062 aa11.39□□□□□ -0.59
FNDC3B-210ENST00000483344 SPDYE1Q8NFV5 336 aaPredicted RBP11.39□□□□□ -0.59
FNDC3B-210ENST00000483344 SPOCK2Q92563 424 aa11.39□□□□□ -0.59
FNDC3B-210ENST00000483344 CLEC11AQ9Y240 323 aa11.38□□□□□ -0.59
FNDC3B-210ENST00000483344 EVX2Q03828 476 aa11.35□□□□□ -0.59
FNDC3B-210ENST00000483344 ZBTB47Q9UFB7 747 aaPredicted RBP11.33□□□□□ -0.6
FNDC3B-210ENST00000483344 PRKAR2AP13861 404 aaKnown RBP11.3□□□□□ -0.6
FNDC3B-210ENST00000483344 PKD2Q13563 968 aa11.29□□□□□ -0.6
FNDC3B-210ENST00000483344 PRR29P0C7W0 189 aa11.27□□□□□ -0.61
FNDC3B-210ENST00000483344 CHADLQ6NUI6 762 aa11.22□□□□□ -0.61
FNDC3B-210ENST00000483344 SLC24A1O60721 1099 aa11.2□□□□□ -0.62
FNDC3B-210ENST00000483344 ECM2O94769 699 aaPredicted RBP11.18□□□□□ -0.62
FNDC3B-210ENST00000483344 DCAF8L2P0C7V8 631 aa11.18□□□□□ -0.62
FNDC3B-210ENST00000483344 CREBZFQ9NS37 354 aa11.17□□□□□ -0.62
FNDC3B-210ENST00000483344 CIZ1Q9ULV3 898 aaPredicted RBP11.16□□□□□ -0.62
FNDC3B-210ENST00000483344 C19orf67A6NJJ6 358 aa11.14□□□□□ -0.63
FNDC3B-210ENST00000483344 MNX1P50219 401 aaPredicted RBP11.09□□□□□ -0.63
FNDC3B-210ENST00000483344 NUBP1P53384 320 aa11.09□□□□□ -0.63
FNDC3B-210ENST00000483344 GSE1Q14687 1217 aa11.08□□□□□ -0.64
FNDC3B-210ENST00000483344 TRIM41Q8WV44 630 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms