RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 TATDN3Q17R31 274 aa4.91□□□□□ -1.62
USP54-206ENST00000433394 ANKDD1AQ495B1 522 aa4.91□□□□□ -1.62
USP54-206ENST00000433394 SLC36A3Q495N2 470 aa4.91□□□□□ -1.62
USP54-206ENST00000433394 ARMCX5Q6P1M9 558 aa4.91□□□□□ -1.62
USP54-206ENST00000433394 Q6ZTC4 211 aa4.91□□□□□ -1.62
USP54-206ENST00000433394 STXBP4Q6ZWJ1 553 aa4.91□□□□□ -1.62
USP54-206ENST00000433394 Q7L0L9 218 aa4.91□□□□□ -1.62
USP54-206ENST00000433394 ERASQ7Z444 233 aa4.91□□□□□ -1.62
USP54-206ENST00000433394 NR4A3Q92570 626 aa4.91□□□□□ -1.62
USP54-206ENST00000433394 DLX4Q92988 240 aaPredicted RBP4.91□□□□□ -1.62
USP54-206ENST00000433394 ESM1Q9NQ30 184 aa4.91□□□□□ -1.62
USP54-206ENST00000433394 STARD5Q9NSY2 213 aa4.91□□□□□ -1.62
USP54-206ENST00000433394 SENP1Q9P0U3 644 aa4.91□□□□□ -1.62
USP54-206ENST00000433394 THAP10Q9P2Z0 257 aaPredicted RBP4.91□□□□□ -1.62
USP54-206ENST00000433394 EIF3LQ9Y262 564 aaKnown RBP4.91□□□□□ -1.62
USP54-206ENST00000433394 MRPS7Q9Y2R9 242 aaKnown RBP4.91□□□□□ -1.62
USP54-206ENST00000433394 MRPL11Q9Y3B7 192 aaKnown RBP4.91□□□□□ -1.62
USP54-206ENST00000433394 AP4B1Q9Y6B7 739 aa4.91□□□□□ -1.62
USP54-206ENST00000433394 DNMBPQ6XZF7 1577 aa4.91□□□□□ -1.62
USP54-206ENST00000433394 CARMIL1Q5VZK9 1371 aa4.91□□□□□ -1.62
USP54-206ENST00000433394 WDR97A6NE52 1622 aa4.9□□□□□ -1.62
USP54-206ENST00000433394 A0A0J9YWU9 116 aa4.9□□□□□ -1.63
USP54-206ENST00000433394 A0A1B0GTH9 108 aa4.9□□□□□ -1.63
USP54-206ENST00000433394 MFSD2BA6NFX1 497 aa4.9□□□□□ -1.63
USP54-206ENST00000433394 H0YCG3 227 aa4.9□□□□□ -1.63
USP54-206ENST00000433394 JAK2O60674 1132 aa4.9□□□□□ -1.63
USP54-206ENST00000433394 ASNSP08243 561 aa4.9□□□□□ -1.63
USP54-206ENST00000433394 PRG2P13727 222 aa4.9□□□□□ -1.63
USP54-206ENST00000433394 SELEP16581 610 aa4.9□□□□□ -1.63
USP54-206ENST00000433394 TRIM23P36406 574 aa4.9□□□□□ -1.63
USP54-206ENST00000433394 MFAP2P55001 183 aa4.9□□□□□ -1.63
USP54-206ENST00000433394 HILS1P60008 231 aa4.9□□□□□ -1.63
USP54-206ENST00000433394 RFTN1Q14699 578 aaPredicted RBP4.9□□□□□ -1.63
USP54-206ENST00000433394 LRRC23Q53EV4 343 aaPredicted RBP4.9□□□□□ -1.63
USP54-206ENST00000433394 VWA2Q5GFL6 755 aa4.9□□□□□ -1.63
USP54-206ENST00000433394 ATAD3BQ5T9A4 648 aa4.9□□□□□ -1.63
USP54-206ENST00000433394 SULT1C3Q6IMI6 304 aa4.9□□□□□ -1.63
USP54-206ENST00000433394 SLC25A24Q6NUK1 477 aa4.9□□□□□ -1.63
USP54-206ENST00000433394 LEG1Q6P5S2 330 aa4.9□□□□□ -1.63
USP54-206ENST00000433394 EMBQ6PCB8 327 aa4.9□□□□□ -1.63
USP54-206ENST00000433394 DOK6Q6PKX4 331 aa4.9□□□□□ -1.63
USP54-206ENST00000433394 ZNF562Q6V9R5 426 aa4.9□□□□□ -1.63
USP54-206ENST00000433394 RPAINQ86UA6 219 aa4.9□□□□□ -1.63
USP54-206ENST00000433394 CCDC71Q8IV32 467 aaPredicted RBP4.9□□□□□ -1.63
USP54-206ENST00000433394 MIPOL1Q8TD10 442 aa4.9□□□□□ -1.63
USP54-206ENST00000433394 TAF15Q92804 592 aaKnown RBP eCLIP4.9□□□□□ -1.63
USP54-206ENST00000433394 RAB7BQ96AH8 199 aa4.9□□□□□ -1.63
USP54-206ENST00000433394 TRIM9Q9C026 710 aa4.9□□□□□ -1.63
USP54-206ENST00000433394 PALMDQ9NP74 551 aa4.9□□□□□ -1.63
USP54-206ENST00000433394 RNF6Q9Y252 685 aa4.9□□□□□ -1.63
USP54-206ENST00000433394 CCDC7Q96M83 1385 aa4.9□□□□□ -1.63
USP54-206ENST00000433394 TRBV7-9A0A0J9YWB2 115 aa4.89□□□□□ -1.63
USP54-206ENST00000433394 GSAPA4D1B5 854 aa4.89□□□□□ -1.63
USP54-206ENST00000433394 TRABD2BA6NFA1 517 aa4.89□□□□□ -1.63
USP54-206ENST00000433394 FBLL1A6NHQ2 334 aaKnown RBP4.89□□□□□ -1.63
USP54-206ENST00000433394 PDLIM1O00151 329 aa4.89□□□□□ -1.63
USP54-206ENST00000433394 CLDN5O00501 218 aa4.89□□□□□ -1.63
USP54-206ENST00000433394 MPHOSPH10O00566 681 aaKnown RBP4.89□□□□□ -1.63
USP54-206ENST00000433394 CASKO14936 926 aa4.89□□□□□ -1.63
USP54-206ENST00000433394 MT-ND1P03886 318 aa4.89□□□□□ -1.63
USP54-206ENST00000433394 BRCC3P46736 316 aa4.89□□□□□ -1.63
USP54-206ENST00000433394 RPL34P49207 117 aaKnown RBP4.89□□□□□ -1.63
USP54-206ENST00000433394 ATP4BP51164 291 aa4.89□□□□□ -1.63
USP54-206ENST00000433394 METAP1P53582 386 aa4.89□□□□□ -1.63
USP54-206ENST00000433394 ITPK1Q13572 414 aa4.89□□□□□ -1.63
USP54-206ENST00000433394 LY6DQ14210 128 aa4.89□□□□□ -1.63
USP54-206ENST00000433394 SIX1Q15475 284 aaPredicted RBP4.89□□□□□ -1.63
USP54-206ENST00000433394 CD226Q15762 336 aa4.89□□□□□ -1.63
USP54-206ENST00000433394 ZKSCAN8Q15776 578 aaPredicted RBP4.89□□□□□ -1.63
USP54-206ENST00000433394 USH1GQ495M9 461 aa4.89□□□□□ -1.63
USP54-206ENST00000433394 CYBRD1Q53TN4 286 aa4.89□□□□□ -1.63
USP54-206ENST00000433394 ACER2Q5QJU3 275 aa4.89□□□□□ -1.63
USP54-206ENST00000433394 LCE1AQ5T7P2 110 aa4.89□□□□□ -1.63
USP54-206ENST00000433394 PRR5LQ6MZQ0 368 aa4.89□□□□□ -1.63
USP54-206ENST00000433394 BLOC1S2Q6QNY1 142 aa4.89□□□□□ -1.63
USP54-206ENST00000433394 ARMCX2Q7L311 632 aa4.89□□□□□ -1.63
USP54-206ENST00000433394 PHC2Q8IXK0 858 aa4.89□□□□□ -1.63
USP54-206ENST00000433394 C4orf32Q8N8J7 132 aa4.89□□□□□ -1.63
USP54-206ENST00000433394 ZNF540Q8NDQ6 660 aa4.89□□□□□ -1.63
USP54-206ENST00000433394 PRSS33Q8NF86 280 aa4.89□□□□□ -1.63
USP54-206ENST00000433394 DTNBP1Q96EV8 351 aa4.89□□□□□ -1.63
USP54-206ENST00000433394 AKR1E2Q96JD6 320 aa4.89□□□□□ -1.63
USP54-206ENST00000433394 C18orf12Q96KH6 178 aa4.89□□□□□ -1.63
USP54-206ENST00000433394 TRIM15Q9C019 465 aa4.89□□□□□ -1.63
USP54-206ENST00000433394 HEXA-AS1Q9H8Q6 139 aa4.89□□□□□ -1.63
USP54-206ENST00000433394 RAI14Q9P0K7 980 aa4.89□□□□□ -1.63
USP54-206ENST00000433394 CTSZQ9UBR2 303 aa4.89□□□□□ -1.63
USP54-206ENST00000433394 SPATA2Q9UM82 520 aa4.89□□□□□ -1.63
USP54-206ENST00000433394 SYNJ1O43426 1573 aa4.88□□□□□ -1.63
USP54-206ENST00000433394 RNF222A6NCQ9 220 aa4.88□□□□□ -1.63
USP54-206ENST00000433394 H0YL77 283 aa4.88□□□□□ -1.63
USP54-206ENST00000433394 K7EQG2 157 aa4.88□□□□□ -1.63
USP54-206ENST00000433394 TBX19O60806 448 aa4.88□□□□□ -1.63
USP54-206ENST00000433394 OAS1P00973 400 aaKnown RBP4.88□□□□□ -1.63
USP54-206ENST00000433394 PTPN4P29074 926 aa4.88□□□□□ -1.63
USP54-206ENST00000433394 PGFP49763 221 aa4.88□□□□□ -1.63
USP54-206ENST00000433394 HYAL1Q12794 435 aa4.88□□□□□ -1.63
USP54-206ENST00000433394 SLX4IPQ5VYV7 408 aa4.88□□□□□ -1.63
USP54-206ENST00000433394 WDR25Q64LD2 544 aaPredicted RBP4.88□□□□□ -1.63
USP54-206ENST00000433394 PPP1R42Q7Z4L9 355 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms