RNA–Protein interactions for RNA: ENST00000424721.5

VPS8-205, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 653 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-205ENST00000424721 TFF3Q07654 80 aa4.9□□□□□ -1.63
VPS8-205ENST00000424721 ASPHQ12797 758 aa4.9□□□□□ -1.63
VPS8-205ENST00000424721 PDIA2Q13087 525 aaKnown RBP4.9□□□□□ -1.63
VPS8-205ENST00000424721 CHIT1Q13231 466 aa4.9□□□□□ -1.63
VPS8-205ENST00000424721 SLAMF1Q13291 335 aa4.9□□□□□ -1.63
VPS8-205ENST00000424721 GAB1Q13480 694 aa4.9□□□□□ -1.63
VPS8-205ENST00000424721 KEAP1Q14145 624 aa4.9□□□□□ -1.63
VPS8-205ENST00000424721 DOC2AQ14183 400 aa4.9□□□□□ -1.63
VPS8-205ENST00000424721 RCAN2Q14206 197 aa4.9□□□□□ -1.63
VPS8-205ENST00000424721 TOMM20Q15388 145 aa4.9□□□□□ -1.63
VPS8-205ENST00000424721 CDSNQ15517 529 aa4.9□□□□□ -1.63
VPS8-205ENST00000424721 TSNQ15631 228 aaKnown RBP4.9□□□□□ -1.63
VPS8-205ENST00000424721 PPP1R3AQ16821 1122 aa4.9□□□□□ -1.63
VPS8-205ENST00000424721 ZNF791Q3KP31 576 aaPredicted RBP4.9□□□□□ -1.63
VPS8-205ENST00000424721 FLYWCH1Q4VC44 716 aa4.9□□□□□ -1.63
VPS8-205ENST00000424721 ZMAT1Q5H9K5 638 aa4.9□□□□□ -1.63
VPS8-205ENST00000424721 DEPDC1Q5TB30 811 aa4.9□□□□□ -1.63
VPS8-205ENST00000424721 LIPJQ5W064 366 aa4.9□□□□□ -1.63
VPS8-205ENST00000424721 STEAP4Q687X5 459 aa4.9□□□□□ -1.63
VPS8-205ENST00000424721 METTL2BQ6P1Q9 378 aaKnown RBP4.9□□□□□ -1.63
VPS8-205ENST00000424721 KLC3Q6P597 504 aa4.9□□□□□ -1.63
VPS8-205ENST00000424721 C3orf62Q6ZUJ4 267 aa4.9□□□□□ -1.63
VPS8-205ENST00000424721 RAPH1Q70E73 1250 aa4.9□□□□□ -1.63
VPS8-205ENST00000424721 LRRC70Q7Z2Q7 622 aa4.9□□□□□ -1.63
VPS8-205ENST00000424721 CLNKQ7Z7G1 428 aa4.9□□□□□ -1.63
VPS8-205ENST00000424721 TBC1D1Q86TI0 1168 aaPredicted RBP4.9□□□□□ -1.63
VPS8-205ENST00000424721 LACC1Q8IV20 430 aa4.9□□□□□ -1.63
VPS8-205ENST00000424721 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.9□□□□□ -1.63
VPS8-205ENST00000424721 ST13P4Q8IZP2 240 aaPredicted RBP4.9□□□□□ -1.63
VPS8-205ENST00000424721 MARVELD2Q8N4S9 558 aa4.9□□□□□ -1.63
VPS8-205ENST00000424721 NUDT10Q8NFP7 164 aa4.9□□□□□ -1.63
VPS8-205ENST00000424721 NEIL3Q8TAT5 605 aa4.9□□□□□ -1.63
VPS8-205ENST00000424721 PAQR8Q8TEZ7 354 aa4.9□□□□□ -1.63
VPS8-205ENST00000424721 ANP32BQ92688 251 aaKnown RBP4.9□□□□□ -1.63
VPS8-205ENST00000424721 RIT1Q92963 219 aa4.9□□□□□ -1.63
VPS8-205ENST00000424721 RNASE6Q93091 150 aaKnown RBP4.9□□□□□ -1.63
VPS8-205ENST00000424721 UCN3Q969E3 161 aa4.9□□□□□ -1.63
VPS8-205ENST00000424721 TRIM63Q969Q1 353 aa4.9□□□□□ -1.63
VPS8-205ENST00000424721 MBD6Q96DN6 1003 aa4.9□□□□□ -1.63
VPS8-205ENST00000424721 NUDT11Q96G61 164 aa4.9□□□□□ -1.63
VPS8-205ENST00000424721 JSRP1Q96MG2 331 aaPredicted RBP4.9□□□□□ -1.63
VPS8-205ENST00000424721 ZFP3Q96NJ6 502 aa4.9□□□□□ -1.63
VPS8-205ENST00000424721 F2RL3Q96RI0 385 aa4.9□□□□□ -1.63
VPS8-205ENST00000424721 CPNE1Q99829 537 aa4.9□□□□□ -1.63
VPS8-205ENST00000424721 DOHHQ9BU89 302 aa4.9□□□□□ -1.63
VPS8-205ENST00000424721 CXXC4Q9H2H0 198 aa4.9□□□□□ -1.63
VPS8-205ENST00000424721 LIN28AQ9H9Z2 209 aaKnown RBP4.9□□□□□ -1.63
VPS8-205ENST00000424721 CALHM2Q9HA72 323 aa4.9□□□□□ -1.63
VPS8-205ENST00000424721 SNX15Q9NRS6 342 aa4.9□□□□□ -1.63
VPS8-205ENST00000424721 RASSF1Q9NS23 344 aa4.9□□□□□ -1.63
VPS8-205ENST00000424721 NMRK1Q9NWW6 199 aa4.9□□□□□ -1.63
VPS8-205ENST00000424721 LYARQ9NX58 379 aaKnown RBP4.9□□□□□ -1.63
VPS8-205ENST00000424721 OPTCQ9UBM4 332 aa4.9□□□□□ -1.63
VPS8-205ENST00000424721 ST6GALNAC2Q9UJ37 374 aa4.9□□□□□ -1.63
VPS8-205ENST00000424721 PTBP2Q9UKA9 531 aaKnown RBP4.9□□□□□ -1.63
VPS8-205ENST00000424721 ZNF490Q9ULM2 529 aaPredicted RBP4.9□□□□□ -1.63
VPS8-205ENST00000424721 SNX12Q9UMY4 172 aa4.9□□□□□ -1.63
VPS8-205ENST00000424721 CHMP2BQ9UQN3 213 aa4.9□□□□□ -1.63
VPS8-205ENST00000424721 LRCH1Q9Y2L9 728 aa4.9□□□□□ -1.63
VPS8-205ENST00000424721 ATG4BQ9Y4P1 393 aa4.9□□□□□ -1.63
VPS8-205ENST00000424721 TEX264Q9Y6I9 313 aa4.9□□□□□ -1.63
VPS8-205ENST00000424721 IKBKGQ9Y6K9 419 aa4.9□□□□□ -1.63
VPS8-205ENST00000424721 SCN3AQ9NY46 2000 aa4.9□□□□□ -1.63
VPS8-205ENST00000424721 OTOGQ6ZRI0 2925 aa4.9□□□□□ -1.63
VPS8-205ENST00000424721 PDZD2O15018 2839 aa4.89□□□□□ -1.63
VPS8-205ENST00000424721 C15orf38-AP3S2A0A0A6YYH1 394 aa4.89□□□□□ -1.63
VPS8-205ENST00000424721 C2orf92A0A1B0GVN3 265 aa4.89□□□□□ -1.63
VPS8-205ENST00000424721 TMEM200CA6NKL6 621 aa4.89□□□□□ -1.63
VPS8-205ENST00000424721 A6NNC1 897 aa4.89□□□□□ -1.63
VPS8-205ENST00000424721 EFCAB8A8MWE9 144 aa4.89□□□□□ -1.63
VPS8-205ENST00000424721 K7EPI3 171 aa4.89□□□□□ -1.63
VPS8-205ENST00000424721 ZNHIT1O43257 154 aa4.89□□□□□ -1.63
VPS8-205ENST00000424721 PROM1O43490 865 aa4.89□□□□□ -1.63
VPS8-205ENST00000424721 UGDHO60701 494 aa4.89□□□□□ -1.63
VPS8-205ENST00000424721 TRIM13O60858 407 aa4.89□□□□□ -1.63
VPS8-205ENST00000424721 LDB3O75112 727 aa4.89□□□□□ -1.63
VPS8-205ENST00000424721 ERN1O75460 977 aaKnown RBP4.89□□□□□ -1.63
VPS8-205ENST00000424721 ACTL6AO96019 429 aa4.89□□□□□ -1.63
VPS8-205ENST00000424721 RAF1P04049 648 aa4.89□□□□□ -1.63
VPS8-205ENST00000424721 SLC35E2BP0CK96 405 aa4.89□□□□□ -1.63
VPS8-205ENST00000424721 SLC35E2P0CK97 266 aa4.89□□□□□ -1.63
VPS8-205ENST00000424721 NAGAP17050 411 aa4.89□□□□□ -1.63
VPS8-205ENST00000424721 CTSSP25774 331 aa4.89□□□□□ -1.63
VPS8-205ENST00000424721 GDF1P27539 372 aa4.89□□□□□ -1.63
VPS8-205ENST00000424721 CERS1P27544 350 aa4.89□□□□□ -1.63
VPS8-205ENST00000424721 PIK3R1P27986 724 aa4.89□□□□□ -1.63
VPS8-205ENST00000424721 DEKP35659 375 aaKnown RBP4.89□□□□□ -1.63
VPS8-205ENST00000424721 PIGAP37287 484 aa4.89□□□□□ -1.63
VPS8-205ENST00000424721 HSPA7P48741 367 aa4.89□□□□□ -1.63
VPS8-205ENST00000424721 DNASE1L1P49184 302 aa4.89□□□□□ -1.63
VPS8-205ENST00000424721 DIO3P55073 304 aa4.89□□□□□ -1.63
VPS8-205ENST00000424721 RAB10P61026 200 aa4.89□□□□□ -1.63
VPS8-205ENST00000424721 PSPHP78330 225 aa4.89□□□□□ -1.63
VPS8-205ENST00000424721 SRSF2Q01130 221 aaKnown RBP4.89□□□□□ -1.63
VPS8-205ENST00000424721 CAV1Q03135 178 aa4.89□□□□□ -1.63
VPS8-205ENST00000424721 FOXO1Q12778 655 aa4.89□□□□□ -1.63
VPS8-205ENST00000424721 FAM83EQ2M2I3 478 aa4.89□□□□□ -1.63
VPS8-205ENST00000424721 CT83Q5H943 113 aa4.89□□□□□ -1.63
VPS8-205ENST00000424721 KHDRBS2Q5VWX1 349 aaKnown RBP4.89□□□□□ -1.63
VPS8-205ENST00000424721 SHEQ5VZ18 495 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms