RNA–Protein interactions for RNA: ENST00000331456.6

TRAIP-201, Transcript of TRAF interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAIP, Length 2,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-201ENST00000331456 QRSL1Q9H0R6 528 aaKnown RBP13.06□□□□□ -0.32
TRAIP-201ENST00000331456 DUSP22Q9NRW4 184 aa13.06□□□□□ -0.32
TRAIP-201ENST00000331456 UCKL1Q9NWZ5 548 aa13.06□□□□□ -0.32
TRAIP-201ENST00000331456 MAT2BQ9NZL9 334 aa13.06□□□□□ -0.32
TRAIP-201ENST00000331456 ERVK-18Q9QC07 812 aa13.06□□□□□ -0.32
TRAIP-201ENST00000331456 AASSQ9UDR5 926 aa13.06□□□□□ -0.32
TRAIP-201ENST00000331456 MPZL2O60487 215 aa13.06□□□□□ -0.32
TRAIP-201ENST00000331456 COQ9O75208 318 aa13.06□□□□□ -0.32
TRAIP-201ENST00000331456 NME6O75414 186 aaPredicted RBP13.06□□□□□ -0.32
TRAIP-201ENST00000331456 NSA2O95478 260 aaKnown RBP13.06□□□□□ -0.32
TRAIP-201ENST00000331456 ZBTB11O95625 1053 aaPredicted RBP13.06□□□□□ -0.32
TRAIP-201ENST00000331456 EPPINO95925 133 aa13.06□□□□□ -0.32
TRAIP-201ENST00000331456 AK1P00568 194 aa13.06□□□□□ -0.32
TRAIP-201ENST00000331456 CTSBP07858 339 aa13.06□□□□□ -0.32
TRAIP-201ENST00000331456 OSMP13725 252 aa13.06□□□□□ -0.32
TRAIP-201ENST00000331456 FUT4P22083 530 aa13.06□□□□□ -0.32
TRAIP-201ENST00000331456 ALDH4A1P30038 563 aa13.06□□□□□ -0.32
TRAIP-201ENST00000331456 AVPR1BP47901 424 aa13.06□□□□□ -0.32
TRAIP-201ENST00000331456 TAS2R41P59536 307 aa13.06□□□□□ -0.32
TRAIP-201ENST00000331456 PTGES3Q15185 160 aaKnown RBP13.06□□□□□ -0.32
TRAIP-201ENST00000331456 SEC23BQ15437 767 aa13.06□□□□□ -0.32
TRAIP-201ENST00000331456 RHOXF1Q8NHV9 184 aa13.06□□□□□ -0.32
TRAIP-201ENST00000331456 MUL1Q969V5 352 aa13.06□□□□□ -0.32
TRAIP-201ENST00000331456 ZNF285Q96NJ3 590 aa13.06□□□□□ -0.32
TRAIP-201ENST00000331456 FUZQ9BT04 418 aa13.06□□□□□ -0.32
TRAIP-201ENST00000331456 LHPPQ9H008 270 aa13.06□□□□□ -0.32
TRAIP-201ENST00000331456 HCN3Q9P1Z3 774 aa13.06□□□□□ -0.32
TRAIP-201ENST00000331456 LRIT1Q9P2V4 623 aa13.06□□□□□ -0.32
TRAIP-201ENST00000331456 MKLN1Q9UL63 735 aa13.06□□□□□ -0.32
TRAIP-201ENST00000331456 SATB2Q9UPW6 733 aa13.06□□□□□ -0.32
TRAIP-201ENST00000331456 HYKKA2RU49 373 aa13.05□□□□□ -0.32
TRAIP-201ENST00000331456 CLDN4O14493 209 aa13.05□□□□□ -0.32
TRAIP-201ENST00000331456 FCMRO60667 390 aa13.05□□□□□ -0.32
TRAIP-201ENST00000331456 CCNYL3P0C7X3 344 aa13.05□□□□□ -0.32
TRAIP-201ENST00000331456 CTSKP43235 329 aa13.05□□□□□ -0.32
TRAIP-201ENST00000331456 GFERP55789 205 aa13.05□□□□□ -0.32
TRAIP-201ENST00000331456 STX4Q12846 297 aa13.05□□□□□ -0.32
TRAIP-201ENST00000331456 SLC13A2Q13183 592 aa13.05□□□□□ -0.32
TRAIP-201ENST00000331456 COL9A2Q14055 689 aaPredicted RBP13.05□□□□□ -0.32
TRAIP-201ENST00000331456 SMN1Q16637 294 aaKnown RBP13.05□□□□□ -0.32
TRAIP-201ENST00000331456 INAVAQ3KP66 663 aa13.05□□□□□ -0.32
TRAIP-201ENST00000331456 EIPR1Q53HC9 387 aa13.05□□□□□ -0.32
TRAIP-201ENST00000331456 LAIR1Q6GTX8 287 aa13.05□□□□□ -0.32
TRAIP-201ENST00000331456 PGBD2Q6P3X8 592 aa13.05□□□□□ -0.32
TRAIP-201ENST00000331456 PODNL1Q6PEZ8 512 aa13.05□□□□□ -0.32
TRAIP-201ENST00000331456 ZNF595Q8IYB9 648 aa13.05□□□□□ -0.32
TRAIP-201ENST00000331456 COX18Q8N8Q8 333 aa13.05□□□□□ -0.32
TRAIP-201ENST00000331456 SLC7A13Q8TCU3 470 aa13.05□□□□□ -0.32
TRAIP-201ENST00000331456 APH1BQ8WW43 257 aa13.05□□□□□ -0.32
TRAIP-201ENST00000331456 UBE2FQ969M7 185 aa13.05□□□□□ -0.32
TRAIP-201ENST00000331456 C12orf43Q96C57 262 aaKnown RBP13.05□□□□□ -0.32
TRAIP-201ENST00000331456 SDF2Q99470 211 aa13.05□□□□□ -0.32
TRAIP-201ENST00000331456 POLR2J3Q9H1A7 115 aaKnown RBP13.05□□□□□ -0.32
TRAIP-201ENST00000331456 ERVMER34-1Q9H9K5 563 aa13.05□□□□□ -0.32
TRAIP-201ENST00000331456 PLCXD1Q9NUJ7 323 aa13.05□□□□□ -0.32
TRAIP-201ENST00000331456 FTSJ1Q9UET6 329 aa13.05□□□□□ -0.32
TRAIP-201ENST00000331456 CDC14AQ9UNH5 594 aa13.05□□□□□ -0.32
TRAIP-201ENST00000331456 ZNF443Q9Y2A4 671 aaPredicted RBP13.05□□□□□ -0.32
TRAIP-201ENST00000331456 CSNK1G3Q9Y6M4 447 aa13.05□□□□□ -0.32
TRAIP-201ENST00000331456 RNF215Q9Y6U7 377 aa13.05□□□□□ -0.32
TRAIP-201ENST00000331456 CEP192Q8TEP8 1941 aa13.05□□□□□ -0.32
TRAIP-201ENST00000331456 ZAR1LA6NP61 321 aa13.05□□□□□ -0.32
TRAIP-201ENST00000331456 ZNF99A8MXY4 864 aaPredicted RBP13.05□□□□□ -0.32
TRAIP-201ENST00000331456 AP3D1O14617 1153 aa13.05□□□□□ -0.32
TRAIP-201ENST00000331456 FOXS1O43638 330 aa13.05□□□□□ -0.32
TRAIP-201ENST00000331456 CTNSO60931 367 aa13.05□□□□□ -0.32
TRAIP-201ENST00000331456 STX11O75558 287 aa13.05□□□□□ -0.32
TRAIP-201ENST00000331456 PCMT1P22061 227 aa13.05□□□□□ -0.32
TRAIP-201ENST00000331456 CHMP24386 653 aa13.05□□□□□ -0.32
TRAIP-201ENST00000331456 POU1F1P28069 291 aa13.05□□□□□ -0.32
TRAIP-201ENST00000331456 SOX18P35713 384 aa13.05□□□□□ -0.32
TRAIP-201ENST00000331456 GABRA4P48169 554 aa13.05□□□□□ -0.32
TRAIP-201ENST00000331456 TMBIM6P55061 237 aa13.05□□□□□ -0.32
TRAIP-201ENST00000331456 ROR2Q01974 943 aaKnown RBP13.05□□□□□ -0.32
TRAIP-201ENST00000331456 MVKQ03426 396 aa13.05□□□□□ -0.32
TRAIP-201ENST00000331456 MGAT2Q10469 447 aa13.05□□□□□ -0.32
TRAIP-201ENST00000331456 COX10Q12887 443 aa13.05□□□□□ -0.32
TRAIP-201ENST00000331456 TARDBPQ13148 414 aaKnown RBP eCLIP13.05□□□□□ -0.32
TRAIP-201ENST00000331456 ILKQ13418 452 aa13.05□□□□□ -0.32
TRAIP-201ENST00000331456 EXOSC6Q5RKV6 272 aaKnown RBP13.05□□□□□ -0.32
TRAIP-201ENST00000331456 DCST2Q5T1A1 773 aa13.05□□□□□ -0.32
TRAIP-201ENST00000331456 TYW3Q6IPR3 259 aaKnown RBP13.05□□□□□ -0.32
TRAIP-201ENST00000331456 PRSS48Q7RTY5 328 aa13.05□□□□□ -0.32
TRAIP-201ENST00000331456 CARFQ8N187 725 aa13.05□□□□□ -0.32
TRAIP-201ENST00000331456 VWA5B2Q8N398 1253 aa13.05□□□□□ -0.32
TRAIP-201ENST00000331456 SIMC1Q8NDZ2 872 aa13.05□□□□□ -0.32
TRAIP-201ENST00000331456 PMM1Q92871 262 aa13.05□□□□□ -0.32
TRAIP-201ENST00000331456 SLC38A4Q969I6 547 aa13.05□□□□□ -0.32
TRAIP-201ENST00000331456 CTHRC1Q96CG8 243 aa13.05□□□□□ -0.32
TRAIP-201ENST00000331456 ZG16BQ96DA0 208 aa13.05□□□□□ -0.32
TRAIP-201ENST00000331456 DOK1Q99704 481 aa13.05□□□□□ -0.32
TRAIP-201ENST00000331456 IGHV5-51A0A0C4DH38 117 aa13.04□□□□□ -0.32
TRAIP-201ENST00000331456 C19orf67A6NJJ6 358 aa13.04□□□□□ -0.32
TRAIP-201ENST00000331456 NUDT21O43809 227 aaKnown RBP13.04□□□□□ -0.32
TRAIP-201ENST00000331456 ZIC2O95409 532 aaPredicted RBP13.04□□□□□ -0.32
TRAIP-201ENST00000331456 THBS1P07996 1170 aa13.04□□□□□ -0.32
TRAIP-201ENST00000331456 IFNGR2P38484 337 aa13.04□□□□□ -0.32
TRAIP-201ENST00000331456 ARL4DP49703 201 aa13.04□□□□□ -0.32
TRAIP-201ENST00000331456 RGS8P57771 180 aaPredicted RBP13.04□□□□□ -0.32
TRAIP-201ENST00000331456 EMX1Q04741 257 aaPredicted RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 6.3 ms