RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Swi5Q8K3D3 89 aa10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Lrch4Q921G6 680 aa10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Clp1Q99LI9 425 aa10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Asf1aQ9CQE6 204 aa10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Fam174aQ9D3L0 190 aa10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Slamf9Q9D780 285 aa10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Tlr1Q9EPQ1 795 aa10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Jph3Q9ET77 744 aa10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Dnajb2Q9QYI5 324 aa10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 PrkraQ9WTX2 313 aaKnown RBP10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Dpp6Q9Z218 804 aa10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Dock6Q8VDR9 2080 aa10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Col24a1Q30D77 1733 aa10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Gm28557A0A087WQQ0 336 aa10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Gm44973A0A140LJJ1 189 aa10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Sdccag3A2AIW0 432 aa10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Xlr5aA2BI45 236 aa10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Gm21904A8HG57 180 aa10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Olfr605E9Q838 314 aa10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Gm21866J3QMH4 180 aa10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Rgs5O08850 181 aa10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Dnajb3O35723 242 aa10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Hoxd8P23463 289 aa10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Igfbp3P47878 292 aa10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 EgflamQ4VBE4 1017 aa10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Zdhhc20Q5Y5T1 380 aa10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 PdgfrlQ6PE55 375 aa10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Zc3hc1Q80YV2 501 aa10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Gpr158Q8C419 1200 aa10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Q8CF31 99 aa10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Pex12Q8VC48 359 aa10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Lsm7Q9CQQ8 103 aaKnown RBP10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Q9CWU4 180 aaKnown RBP10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 3110001I22RikQ9CZ70 312 aa10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Znf524Q9D0B1 321 aa10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 DynapQ9D7M5 161 aa10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Ccdc107Q9DCC3 242 aa10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Ssr3Q9DCF9 185 aa10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Slc38a3Q9DCP2 505 aa10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 ItgaxQ9QXH4 1169 aa10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Gdf2Q9WV56 428 aa10.95□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Tp53bp1P70399 1969 aa10.94□□□□□ -0.66
Col9a1-202ENSMUST00000088349 1700028J19RikA0A0U1RP08 172 aa10.94□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Otud4B2RRE7 1107 aaKnown RBP10.94□□□□□ -0.66
Col9a1-202ENSMUST00000088349 2610021A01RikE9Q0Q3 834 aa10.94□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Zw10O54692 779 aa10.94□□□□□ -0.66
Col9a1-202ENSMUST00000088349 IlkO55222 452 aa10.94□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Cdk1P11440 297 aa10.94□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Fabp7P51880 132 aa10.94□□□□□ -0.66
Col9a1-202ENSMUST00000088349 NcanP55066 1268 aa10.94□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Hif3aQ0VBL6 662 aa10.94□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Xkr9Q5GH62 373 aa10.94□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Sgk494Q5SYL1 278 aa10.94□□□□□ -0.66
Col9a1-202ENSMUST00000088349 GnptgQ6S5C2 307 aa10.94□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Cacng6Q8VHW3 260 aa10.94□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Vmn1r51Q8VIC6 319 aa10.94□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Frs3Q91WJ0 492 aa10.94□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Ppp1r16aQ923M0 524 aa10.94□□□□□ -0.66
Col9a1-202ENSMUST00000088349 BniplQ99JU7 328 aa10.94□□□□□ -0.66
Col9a1-202ENSMUST00000088349 ItpaQ9D892 198 aa10.94□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Nacc2Q9DCM7 586 aa10.94□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Emc7Q9EP72 241 aa10.94□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Tinf2Q9QXG9 341 aa10.94□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Fem1aaQ9Z2G1 654 aa10.94□□□□□ -0.66
Col9a1-202ENSMUST00000088349 PtprhE9Q0N2 971 aa10.94□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Slc27a6E9Q9W4 619 aa10.94□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Vmn1r27K7N688 303 aa10.94□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Gcm2O09102 504 aa10.94□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Cnih2O35089 160 aa10.94□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Prl7a1O54830 266 aa10.94□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Psmb5O55234 264 aa10.94□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Sbk2P0C5K1 362 aa10.94□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Syt4P40749 425 aa10.94□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Tas2r7P59530 312 aa10.94□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Wdr5P61965 334 aa10.94□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Dgcr2P98154 548 aa10.94□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Adra2aQ01338 450 aa10.94□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Cyb5r4Q3TDX8 528 aa10.94□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Dcp1bQ3U564 578 aa10.94□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Wdr75Q3U821 830 aaKnown RBP10.94□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Coq8aQ60936 645 aa10.94□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Mapre3Q6PER3 281 aa10.94□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Fam109aQ8BH49 266 aa10.94□□□□□ -0.66
Col9a1-202ENSMUST00000088349 PstkQ8BP74 359 aa10.94□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Adipor2Q8BQS5 386 aa10.94□□□□□ -0.66
Col9a1-202ENSMUST00000088349 PpcdcQ8BZB2 204 aa10.94□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Fam46bQ8C152 427 aa10.94□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Med19Q8C1S0 244 aa10.94□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Yipf4Q8C407 246 aa10.94□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Crispld1Q8CGD2 500 aa10.94□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Bloc1s5Q8R015 185 aa10.94□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Adap2Q8R2V5 381 aa10.94□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Slc3a1Q91WV7 685 aa10.94□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Clcc1Q99LI2 539 aa10.94□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Exo5Q9CXP9 373 aa10.94□□□□□ -0.66
Col9a1-202ENSMUST00000088349 1700086D15RikQ9D9E9 151 aa10.94□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Dpysl5Q9EQF6 564 aa10.94□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Zbtb32Q9JKD9 465 aa10.94□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Cd163l1A0A1B0GSB0 991 aa10.93□□□□□ -0.66
Col9a1-202ENSMUST00000088349 Gm29776A0A286YEC0 699 aa10.93□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 42.7 ms