RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 OR7G1Q8NGA0 311 aa13.44□□□□□ -0.26
PNKP-202ENST00000593706 OR4K14Q8NGD5 310 aa13.44□□□□□ -0.26
PNKP-202ENST00000593706 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.44□□□□□ -0.26
PNKP-202ENST00000593706 UCN3Q969E3 161 aa13.44□□□□□ -0.26
PNKP-202ENST00000593706 WDYHV1Q96HA8 205 aa13.44□□□□□ -0.26
PNKP-202ENST00000593706 ZNF382Q96SR6 550 aa13.44□□□□□ -0.26
PNKP-202ENST00000593706 SERPINI1Q99574 410 aa13.44□□□□□ -0.26
PNKP-202ENST00000593706 OSBPL11Q9BXB4 747 aa13.44□□□□□ -0.26
PNKP-202ENST00000593706 CALHM2Q9HA72 323 aa13.44□□□□□ -0.26
PNKP-202ENST00000593706 FARSBQ9NSD9 589 aaKnown RBP13.44□□□□□ -0.26
PNKP-202ENST00000593706 KLRF1Q9NZS2 232 aa13.44□□□□□ -0.26
PNKP-202ENST00000593706 RPH3AQ9Y2J0 694 aaPredicted RBP13.44□□□□□ -0.26
PNKP-202ENST00000593706 A0A1W2PPM1 405 aa13.43□□□□□ -0.26
PNKP-202ENST00000593706 PPM1BO75688 479 aa13.43□□□□□ -0.26
PNKP-202ENST00000593706 GOSR1O95249 250 aa13.43□□□□□ -0.26
PNKP-202ENST00000593706 ACTL6AO96019 429 aa13.43□□□□□ -0.26
PNKP-202ENST00000593706 CPMP14384 443 aa13.43□□□□□ -0.26
PNKP-202ENST00000593706 GPX3P22352 226 aa13.43□□□□□ -0.26
PNKP-202ENST00000593706 ATP5F1P24539 256 aaPredicted RBP13.43□□□□□ -0.26
PNKP-202ENST00000593706 PTPN6P29350 595 aa13.43□□□□□ -0.26
PNKP-202ENST00000593706 ADSLP30566 484 aaPredicted RBP13.43□□□□□ -0.26
PNKP-202ENST00000593706 XKP51811 444 aa13.43□□□□□ -0.26
PNKP-202ENST00000593706 PRKAA2P54646 552 aa13.43□□□□□ -0.26
PNKP-202ENST00000593706 NAGLUP54802 743 aa13.43□□□□□ -0.26
PNKP-202ENST00000593706 DCAF7P61962 342 aa13.43□□□□□ -0.26
PNKP-202ENST00000593706 GALNT1Q10472 559 aaPredicted RBP13.43□□□□□ -0.26
PNKP-202ENST00000593706 TTC19Q6DKK2 380 aaPredicted RBP13.43□□□□□ -0.26
PNKP-202ENST00000593706 PAGE2Q7Z2X7 111 aa13.43□□□□□ -0.26
PNKP-202ENST00000593706 LUZP2Q86TE4 346 aa13.43□□□□□ -0.26
PNKP-202ENST00000593706 YRDCQ86U90 279 aaKnown RBP13.43□□□□□ -0.26
PNKP-202ENST00000593706 VWA5B2Q8N398 1253 aa13.43□□□□□ -0.26
PNKP-202ENST00000593706 C9orf106Q8NAJ2 232 aa13.43□□□□□ -0.26
PNKP-202ENST00000593706 OR14L1PQ8NHC6 308 aa13.43□□□□□ -0.26
PNKP-202ENST00000593706 ATP6V1E2Q96A05 226 aa13.43□□□□□ -0.26
PNKP-202ENST00000593706 ADIPOR1Q96A54 375 aa13.43□□□□□ -0.26
PNKP-202ENST00000593706 L3HYPDHQ96EM0 354 aa13.43□□□□□ -0.26
PNKP-202ENST00000593706 RBM24Q9BX46 236 aaKnown RBP13.43□□□□□ -0.26
PNKP-202ENST00000593706 MRPL1Q9BYD6 325 aaKnown RBP13.43□□□□□ -0.26
PNKP-202ENST00000593706 BRINP2Q9C0B6 783 aa13.43□□□□□ -0.26
PNKP-202ENST00000593706 NXF5Q9H1B4 397 aaKnown RBP13.43□□□□□ -0.26
PNKP-202ENST00000593706 PCNX3Q9H6A9 2034 aa13.43□□□□□ -0.26
PNKP-202ENST00000593706 NEUROD4Q9HD90 331 aa13.43□□□□□ -0.26
PNKP-202ENST00000593706 TBK1Q9UHD2 729 aa13.43□□□□□ -0.26
PNKP-202ENST00000593706 TRPS1Q9UHF7 1281 aa13.43□□□□□ -0.26
PNKP-202ENST00000593706 BCAP29Q9UHQ4 241 aa13.43□□□□□ -0.26
PNKP-202ENST00000593706 ADAM29Q9UKF5 820 aa13.43□□□□□ -0.26
PNKP-202ENST00000593706 MAPRE3Q9UPY8 281 aa13.43□□□□□ -0.26
PNKP-202ENST00000593706 GOLGA6L10A6NI86 522 aa13.42□□□□□ -0.26
PNKP-202ENST00000593706 G3V2L1 256 aa13.42□□□□□ -0.26
PNKP-202ENST00000593706 IL18BPO95998 194 aa13.42□□□□□ -0.26
PNKP-202ENST00000593706 KLK1P06870 262 aa13.42□□□□□ -0.26
PNKP-202ENST00000593706 PORP16435 677 aaPredicted RBP13.42□□□□□ -0.26
PNKP-202ENST00000593706 IMPDH1P20839 514 aa13.42□□□□□ -0.26
PNKP-202ENST00000593706 SRYQ05066 204 aa13.42□□□□□ -0.26
PNKP-202ENST00000593706 CLCQ05315 142 aa13.42□□□□□ -0.26
PNKP-202ENST00000593706 LTBQ06643 244 aa13.42□□□□□ -0.26
PNKP-202ENST00000593706 PLCXD2Q0VAA5 305 aa13.42□□□□□ -0.26
PNKP-202ENST00000593706 TCHHL1Q5QJ38 904 aaPredicted RBP13.42□□□□□ -0.26
PNKP-202ENST00000593706 ENPP6Q6UWR7 440 aa13.42□□□□□ -0.26
PNKP-202ENST00000593706 Q71RC1 249 aaPredicted RBP13.42□□□□□ -0.26
PNKP-202ENST00000593706 MILR1Q7Z6M3 343 aa13.42□□□□□ -0.26
PNKP-202ENST00000593706 METTL4Q8N3J2 472 aa13.42□□□□□ -0.26
PNKP-202ENST00000593706 ZPLD1Q8TCW7 415 aa13.42□□□□□ -0.26
PNKP-202ENST00000593706 TRPC4APQ8TEL6 797 aa13.42□□□□□ -0.26
PNKP-202ENST00000593706 C18orf12Q96KH6 178 aa13.42□□□□□ -0.26
PNKP-202ENST00000593706 ZFP3Q96NJ6 502 aa13.42□□□□□ -0.26
PNKP-202ENST00000593706 TM9SF2Q99805 663 aa13.42□□□□□ -0.26
PNKP-202ENST00000593706 SFXN3Q9BWM7 321 aa13.42□□□□□ -0.26
PNKP-202ENST00000593706 ITPAQ9BY32 194 aa13.42□□□□□ -0.26
PNKP-202ENST00000593706 PLEKHF2Q9H8W4 249 aa13.42□□□□□ -0.26
PNKP-202ENST00000593706 PPCSQ9HAB8 311 aa13.42□□□□□ -0.26
PNKP-202ENST00000593706 BRF2Q9HAW0 419 aa13.42□□□□□ -0.26
PNKP-202ENST00000593706 GALNT9Q9HCQ5 603 aa13.42□□□□□ -0.26
PNKP-202ENST00000593706 GALNT8Q9NY28 637 aa13.42□□□□□ -0.26
PNKP-202ENST00000593706 EHD3Q9NZN3 535 aa13.42□□□□□ -0.26
PNKP-202ENST00000593706 CFL2Q9Y281 166 aa13.42□□□□□ -0.26
PNKP-202ENST00000593706 DTX4Q9Y2E6 619 aa13.42□□□□□ -0.26
PNKP-202ENST00000593706 SH3D21A4FU49 640 aa13.41□□□□□ -0.26
PNKP-202ENST00000593706 SNPHO15079 494 aa13.41□□□□□ -0.26
PNKP-202ENST00000593706 ERAL1O75616 437 aaKnown RBP13.41□□□□□ -0.26
PNKP-202ENST00000593706 OR4F21O95013 312 aa13.41□□□□□ -0.26
PNKP-202ENST00000593706 PDYNP01213 254 aa13.41□□□□□ -0.26
PNKP-202ENST00000593706 PROCP04070 461 aa13.41□□□□□ -0.26
PNKP-202ENST00000593706 ABCB1P08183 1280 aaPredicted RBP13.41□□□□□ -0.26
PNKP-202ENST00000593706 TAC1P20366 129 aa13.41□□□□□ -0.26
PNKP-202ENST00000593706 DEKP35659 375 aaKnown RBP13.41□□□□□ -0.26
PNKP-202ENST00000593706 SOX18P35713 384 aa13.41□□□□□ -0.26
PNKP-202ENST00000593706 CPOXP36551 454 aa13.41□□□□□ -0.26
PNKP-202ENST00000593706 SLCO1A2P46721 670 aa13.41□□□□□ -0.26
PNKP-202ENST00000593706 MAPK12P53778 367 aa13.41□□□□□ -0.26
PNKP-202ENST00000593706 VSNL1P62760 191 aa13.41□□□□□ -0.26
PNKP-202ENST00000593706 FOXF2Q12947 444 aa13.41□□□□□ -0.26
PNKP-202ENST00000593706 IFT88Q13099 833 aa13.41□□□□□ -0.26
PNKP-202ENST00000593706 EXOSC7Q15024 291 aaKnown RBP13.41□□□□□ -0.26
PNKP-202ENST00000593706 CCNYL2Q5T2Q4 361 aa13.41□□□□□ -0.26
PNKP-202ENST00000593706 SLC30A6Q6NXT4 461 aa13.41□□□□□ -0.26
PNKP-202ENST00000593706 COMMD6Q7Z4G1 85 aa13.41□□□□□ -0.26
PNKP-202ENST00000593706 IFNEQ86WN2 208 aa13.41□□□□□ -0.26
PNKP-202ENST00000593706 GCNT2Q8N0V5 402 aa13.41□□□□□ -0.26
PNKP-202ENST00000593706 RDH11Q8TC12 318 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms