RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 CLEC5AQ9NY25 188 aa4.33□□□□□ -1.72
SMARCE1-219ENST00000583294 BCAP29Q9UHQ4 241 aa4.33□□□□□ -1.72
SMARCE1-219ENST00000583294 HOOK1Q9UJC3 728 aaKnown RBP4.33□□□□□ -1.72
SMARCE1-219ENST00000583294 PLEKHA6Q9Y2H5 1048 aa4.33□□□□□ -1.72
SMARCE1-219ENST00000583294 UBE4BO95155 1302 aa4.32□□□□□ -1.72
SMARCE1-219ENST00000583294 SAP18O00422 153 aaKnown RBP4.32□□□□□ -1.72
SMARCE1-219ENST00000583294 PRPSAP2O60256 369 aa4.32□□□□□ -1.72
SMARCE1-219ENST00000583294 SDC3O75056 442 aa4.32□□□□□ -1.72
SMARCE1-219ENST00000583294 KBTBD11O94819 623 aa4.32□□□□□ -1.72
SMARCE1-219ENST00000583294 PTBP3O95758 552 aaKnown RBP4.32□□□□□ -1.72
SMARCE1-219ENST00000583294 IGSF6O95976 241 aa4.32□□□□□ -1.72
SMARCE1-219ENST00000583294 KRTAP10-12P60413 245 aa4.32□□□□□ -1.72
SMARCE1-219ENST00000583294 ZNF85Q03923 595 aa4.32□□□□□ -1.72
SMARCE1-219ENST00000583294 SRYQ05066 204 aa4.32□□□□□ -1.72
SMARCE1-219ENST00000583294 ZNF33BQ06732 778 aa4.32□□□□□ -1.72
SMARCE1-219ENST00000583294 SNX1Q13596 522 aa4.32□□□□□ -1.72
SMARCE1-219ENST00000583294 PARP6Q2NL67 630 aa4.32□□□□□ -1.72
SMARCE1-219ENST00000583294 ZCCHC12Q6PEW1 402 aa4.32□□□□□ -1.72
SMARCE1-219ENST00000583294 OLFM4Q6UX06 510 aa4.32□□□□□ -1.72
SMARCE1-219ENST00000583294 TSEN54Q7Z6J9 526 aaKnown RBP4.32□□□□□ -1.72
SMARCE1-219ENST00000583294 LYG1Q8N1E2 194 aa4.32□□□□□ -1.72
SMARCE1-219ENST00000583294 SLC39A11Q8N1S5 342 aa4.32□□□□□ -1.72
SMARCE1-219ENST00000583294 TYMSOSQ8TAI1 123 aa4.32□□□□□ -1.72
SMARCE1-219ENST00000583294 TSPAN18Q96SJ8 248 aa4.32□□□□□ -1.72
SMARCE1-219ENST00000583294 APOL2Q9BQE5 337 aa4.32□□□□□ -1.72
SMARCE1-219ENST00000583294 RAB17Q9H0T7 212 aa4.32□□□□□ -1.72
SMARCE1-219ENST00000583294 HSD3B7Q9H2F3 369 aa4.32□□□□□ -1.72
SMARCE1-219ENST00000583294 FAM114A2Q9NRY5 505 aa4.32□□□□□ -1.72
SMARCE1-219ENST00000583294 GPR83Q9NYM4 423 aa4.32□□□□□ -1.72
SMARCE1-219ENST00000583294 PRODH2Q9UF12 536 aa4.32□□□□□ -1.72
SMARCE1-219ENST00000583294 PURGQ9UJV8 347 aaKnown RBP4.32□□□□□ -1.72
SMARCE1-219ENST00000583294 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.31□□□□□ -1.72
SMARCE1-219ENST00000583294 WNT2P09544 360 aa4.31□□□□□ -1.72
SMARCE1-219ENST00000583294 GHRP10912 638 aa4.31□□□□□ -1.72
SMARCE1-219ENST00000583294 CAMLGP49069 296 aa4.31□□□□□ -1.72
SMARCE1-219ENST00000583294 PDIA5Q14554 519 aa4.31□□□□□ -1.72
SMARCE1-219ENST00000583294 SMC1AQ14683 1233 aaKnown RBP4.31□□□□□ -1.72
SMARCE1-219ENST00000583294 CEBPEQ15744 281 aa4.31□□□□□ -1.72
SMARCE1-219ENST00000583294 ZNF239Q16600 458 aaKnown RBP4.31□□□□□ -1.72
SMARCE1-219ENST00000583294 PPP1R3AQ16821 1122 aa4.31□□□□□ -1.72
SMARCE1-219ENST00000583294 MS4A13Q5J8X5 152 aa4.31□□□□□ -1.72
SMARCE1-219ENST00000583294 IRGCQ6NXR0 463 aa4.31□□□□□ -1.72
SMARCE1-219ENST00000583294 PNCKQ6P2M8 343 aa4.31□□□□□ -1.72
SMARCE1-219ENST00000583294 P4HA3Q7Z4N8 544 aa4.31□□□□□ -1.72
SMARCE1-219ENST00000583294 ERC1Q8IUD2 1116 aa4.31□□□□□ -1.72
SMARCE1-219ENST00000583294 ARFGAP2Q8N6H7 521 aa4.31□□□□□ -1.72
SMARCE1-219ENST00000583294 RNF148Q8N7C7 305 aa4.31□□□□□ -1.72
SMARCE1-219ENST00000583294 OR56B1Q8NGI3 324 aa4.31□□□□□ -1.72
SMARCE1-219ENST00000583294 DLX4Q92988 240 aaPredicted RBP4.31□□□□□ -1.72
SMARCE1-219ENST00000583294 ZBED6CLQ96FA7 236 aaPredicted RBP4.31□□□□□ -1.72
SMARCE1-219ENST00000583294 PIWIL1Q96J94 861 aaKnown RBP4.31□□□□□ -1.72
SMARCE1-219ENST00000583294 GDAP2Q9NXN4 497 aa4.31□□□□□ -1.72
SMARCE1-219ENST00000583294 RAI14Q9P0K7 980 aa4.31□□□□□ -1.72
SMARCE1-219ENST00000583294 IGHV3OR16-12A0A075B7B8 117 aa4.3□□□□□ -1.72
SMARCE1-219ENST00000583294 LRIT2A6NDA9 550 aa4.3□□□□□ -1.72
SMARCE1-219ENST00000583294 MFSD2BA6NFX1 497 aa4.3□□□□□ -1.72
SMARCE1-219ENST00000583294 RASGRF2O14827 1237 aa4.3□□□□□ -1.72
SMARCE1-219ENST00000583294 BCL2L11O43521 198 aa4.3□□□□□ -1.72
SMARCE1-219ENST00000583294 TYROBPO43914 113 aa4.3□□□□□ -1.72
SMARCE1-219ENST00000583294 RHBDL1O75783 438 aa4.3□□□□□ -1.72
SMARCE1-219ENST00000583294 IGHV3-9P01782 118 aa4.3□□□□□ -1.72
SMARCE1-219ENST00000583294 TSPAN8P19075 237 aa4.3□□□□□ -1.72
SMARCE1-219ENST00000583294 CCNA2P20248 432 aa4.3□□□□□ -1.72
SMARCE1-219ENST00000583294 RPL34P49207 117 aaKnown RBP4.3□□□□□ -1.72
SMARCE1-219ENST00000583294 FUT7Q11130 342 aa4.3□□□□□ -1.72
SMARCE1-219ENST00000583294 SPP2Q13103 211 aa4.3□□□□□ -1.72
SMARCE1-219ENST00000583294 SLC10A1Q14973 349 aa4.3□□□□□ -1.72
SMARCE1-219ENST00000583294 ZSWIM7Q19AV6 140 aa4.3□□□□□ -1.72
SMARCE1-219ENST00000583294 LRIT3Q3SXY7 679 aa4.3□□□□□ -1.72
SMARCE1-219ENST00000583294 ACSF3Q4G176 576 aaPredicted RBP4.3□□□□□ -1.72
SMARCE1-219ENST00000583294 SLC25A30Q5SVS4 291 aa4.3□□□□□ -1.72
SMARCE1-219ENST00000583294 BEND6Q5SZJ8 279 aaPredicted RBP4.3□□□□□ -1.72
SMARCE1-219ENST00000583294 PRR5LQ6MZQ0 368 aa4.3□□□□□ -1.72
SMARCE1-219ENST00000583294 CCBE1Q6UXH8 406 aaPredicted RBP4.3□□□□□ -1.72
SMARCE1-219ENST00000583294 ZNF600Q6ZNG1 722 aa4.3□□□□□ -1.72
SMARCE1-219ENST00000583294 RBM43Q6ZSC3 357 aaKnown RBP4.3□□□□□ -1.72
SMARCE1-219ENST00000583294 RFESDQ8TAC1 157 aa4.3□□□□□ -1.72
SMARCE1-219ENST00000583294 DQX1Q8TE96 717 aaKnown RBP4.3□□□□□ -1.72
SMARCE1-219ENST00000583294 TRIM9Q9C026 710 aa4.3□□□□□ -1.72
SMARCE1-219ENST00000583294 ROPN1Q9HAT0 212 aaPredicted RBP4.3□□□□□ -1.72
SMARCE1-219ENST00000583294 NGBQ9NPG2 151 aa4.3□□□□□ -1.72
SMARCE1-219ENST00000583294 TIGARQ9NQ88 270 aa4.3□□□□□ -1.72
SMARCE1-219ENST00000583294 ZNF490Q9ULM2 529 aaPredicted RBP4.3□□□□□ -1.72
SMARCE1-219ENST00000583294 CLCA3PQ9Y6N3 262 aa4.3□□□□□ -1.72
SMARCE1-219ENST00000583294 ABCC4O15439 1325 aa4.29□□□□□ -1.72
SMARCE1-219ENST00000583294 C11orf98E9PRG8 122 aa4.29□□□□□ -1.72
SMARCE1-219ENST00000583294 PDLIM1O00151 329 aa4.29□□□□□ -1.72
SMARCE1-219ENST00000583294 LGALS8O00214 317 aa4.29□□□□□ -1.72
SMARCE1-219ENST00000583294 SNRPCP09234 159 aaKnown RBP4.29□□□□□ -1.72
SMARCE1-219ENST00000583294 HOXB7P09629 217 aa4.29□□□□□ -1.72
SMARCE1-219ENST00000583294 PVRP15151 417 aa4.29□□□□□ -1.72
SMARCE1-219ENST00000583294 FUT1P19526 365 aa4.29□□□□□ -1.72
SMARCE1-219ENST00000583294 IL10P22301 178 aa4.29□□□□□ -1.72
SMARCE1-219ENST00000583294 IDSP22304 550 aa4.29□□□□□ -1.72
SMARCE1-219ENST00000583294 CHRNA3P32297 505 aa4.29□□□□□ -1.72
SMARCE1-219ENST00000583294 POU3F4P49335 361 aa4.29□□□□□ -1.72
SMARCE1-219ENST00000583294 GMFBP60983 142 aa4.29□□□□□ -1.72
SMARCE1-219ENST00000583294 HERVK_113P63132 956 aa4.29□□□□□ -1.72
SMARCE1-219ENST00000583294 ERVK-8P63133 956 aa4.29□□□□□ -1.72
SMARCE1-219ENST00000583294 RUNX3Q13761 415 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms