RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 BTNL2Q9UIR0 455 aa9.15□□□□□ -0.94
GGA3-209ENST00000580646 DCTN4Q9UJW0 460 aa9.15□□□□□ -0.94
GGA3-209ENST00000580646 C19orf53Q9UNZ5 99 aaPredicted RBP9.15□□□□□ -0.94
GGA3-209ENST00000580646 YARS2Q9Y2Z4 477 aaKnown RBP9.15□□□□□ -0.94
GGA3-209ENST00000580646 PCDHGB6Q9Y5F9 930 aa9.15□□□□□ -0.94
GGA3-209ENST00000580646 PRSS51A0A1B0GVH4 220 aa9.14□□□□□ -0.95
GGA3-209ENST00000580646 C2orf92A0A1B0GVN3 265 aa9.14□□□□□ -0.95
GGA3-209ENST00000580646 FAM234BA2RU67 622 aa9.14□□□□□ -0.95
GGA3-209ENST00000580646 UPK1AO00322 258 aa9.14□□□□□ -0.95
GGA3-209ENST00000580646 PRKNO60260 465 aaPredicted RBP9.14□□□□□ -0.95
GGA3-209ENST00000580646 SCN2BO60939 215 aa9.14□□□□□ -0.95
GGA3-209ENST00000580646 ITGA10O75578 1167 aa9.14□□□□□ -0.95
GGA3-209ENST00000580646 SOX30O94993 753 aa9.14□□□□□ -0.95
GGA3-209ENST00000580646 PGRP06401 933 aa9.14□□□□□ -0.95
GGA3-209ENST00000580646 RNF224P0DH78 156 aa9.14□□□□□ -0.95
GGA3-209ENST00000580646 IMPDH2P12268 514 aa9.14□□□□□ -0.95
GGA3-209ENST00000580646 GPX3P22352 226 aa9.14□□□□□ -0.95
GGA3-209ENST00000580646 SSTR4P31391 388 aa9.14□□□□□ -0.95
GGA3-209ENST00000580646 GPC1P35052 558 aa9.14□□□□□ -0.95
GGA3-209ENST00000580646 ZFP36L2P47974 494 aaKnown RBP9.14□□□□□ -0.95
GGA3-209ENST00000580646 EMDP50402 254 aa9.14□□□□□ -0.95
GGA3-209ENST00000580646 ARFIP2P53365 341 aa9.14□□□□□ -0.95
GGA3-209ENST00000580646 WNT3P56703 355 aa9.14□□□□□ -0.95
GGA3-209ENST00000580646 UFM1P61960 85 aa9.14□□□□□ -0.95
GGA3-209ENST00000580646 MRPS35P82673 323 aaKnown RBP9.14□□□□□ -0.95
GGA3-209ENST00000580646 PRR5P85299 388 aa9.14□□□□□ -0.95
GGA3-209ENST00000580646 SQLEQ14534 574 aa9.14□□□□□ -0.95
GGA3-209ENST00000580646 LTB4RQ15722 352 aa9.14□□□□□ -0.95
GGA3-209ENST00000580646 INAQ16352 499 aa9.14□□□□□ -0.95
GGA3-209ENST00000580646 FAM174BQ3ZCQ3 159 aa9.14□□□□□ -0.95
GGA3-209ENST00000580646 TRMT12Q53H54 448 aaKnown RBP9.14□□□□□ -0.95
GGA3-209ENST00000580646 ZNF324BQ6AW86 544 aaPredicted RBP9.14□□□□□ -0.95
GGA3-209ENST00000580646 ZCCHC12Q6PEW1 402 aa9.14□□□□□ -0.95
GGA3-209ENST00000580646 ZNF551Q7Z340 670 aaPredicted RBP9.14□□□□□ -0.95
GGA3-209ENST00000580646 BEST3Q8N1M1 668 aa9.14□□□□□ -0.95
GGA3-209ENST00000580646 HORMAD2Q8N7B1 307 aa9.14□□□□□ -0.95
GGA3-209ENST00000580646 ADCY4Q8NFM4 1077 aa9.14□□□□□ -0.95
GGA3-209ENST00000580646 OR7G2Q8NG99 324 aa9.14□□□□□ -0.95
GGA3-209ENST00000580646 GOT1L1Q8NHS2 421 aaPredicted RBP9.14□□□□□ -0.95
GGA3-209ENST00000580646 C16orf52Q8NHV5 167 aa9.14□□□□□ -0.95
GGA3-209ENST00000580646 MIPOL1Q8TD10 442 aa9.14□□□□□ -0.95
GGA3-209ENST00000580646 SFXN5Q8TD22 340 aa9.14□□□□□ -0.95
GGA3-209ENST00000580646 HOXB13Q92826 284 aaPredicted RBP9.14□□□□□ -0.95
GGA3-209ENST00000580646 ADIPOR1Q96A54 375 aa9.14□□□□□ -0.95
GGA3-209ENST00000580646 TEX37Q96LM6 180 aa9.14□□□□□ -0.95
GGA3-209ENST00000580646 CCDC115Q96NT0 180 aa9.14□□□□□ -0.95
GGA3-209ENST00000580646 BTBD9Q96Q07 612 aa9.14□□□□□ -0.95
GGA3-209ENST00000580646 SLX1AQ9BQ83 275 aa9.14□□□□□ -0.95
GGA3-209ENST00000580646 TMEM120AQ9BXJ8 343 aa9.14□□□□□ -0.95
GGA3-209ENST00000580646 WWTR1Q9GZV5 400 aa9.14□□□□□ -0.95
GGA3-209ENST00000580646 CDCP1Q9H5V8 836 aa9.14□□□□□ -0.95
GGA3-209ENST00000580646 C3orf14Q9HBI5 128 aa9.14□□□□□ -0.95
GGA3-209ENST00000580646 OLAHQ9NV23 265 aa9.14□□□□□ -0.95
GGA3-209ENST00000580646 ERRFI1Q9UJM3 462 aaPredicted RBP9.14□□□□□ -0.95
GGA3-209ENST00000580646 SLC5A6Q9Y289 635 aa9.14□□□□□ -0.95
GGA3-209ENST00000580646 POLEQ07864 2286 aa9.14□□□□□ -0.95
GGA3-209ENST00000580646 SPTAN1Q13813 2472 aaKnown RBP9.13□□□□□ -0.95
GGA3-209ENST00000580646 GMNCA6NCL1 334 aa9.13□□□□□ -0.95
GGA3-209ENST00000580646 WIPF3A6NGB9 483 aa9.13□□□□□ -0.95
GGA3-209ENST00000580646 FRG2CA6NGY1 282 aa9.13□□□□□ -0.95
GGA3-209ENST00000580646 TO15178 435 aa9.13□□□□□ -0.95
GGA3-209ENST00000580646 ACOX3O15254 700 aa9.13□□□□□ -0.95
GGA3-209ENST00000580646 EMC8O43402 210 aa9.13□□□□□ -0.95
GGA3-209ENST00000580646 MAN1A2O60476 641 aa9.13□□□□□ -0.95
GGA3-209ENST00000580646 RASAL1O95294 804 aa9.13□□□□□ -0.95
GGA3-209ENST00000580646 NAGAP17050 411 aa9.13□□□□□ -0.95
GGA3-209ENST00000580646 DRD5P21918 477 aa9.13□□□□□ -0.95
GGA3-209ENST00000580646 PAX7P23759 505 aa9.13□□□□□ -0.95
GGA3-209ENST00000580646 IL12AP29459 219 aa9.13□□□□□ -0.95
GGA3-209ENST00000580646 ADSLP30566 484 aaPredicted RBP9.13□□□□□ -0.95
GGA3-209ENST00000580646 S100A3P33764 101 aa9.13□□□□□ -0.95
GGA3-209ENST00000580646 GCKP35557 465 aa9.13□□□□□ -0.95
GGA3-209ENST00000580646 CD96P40200 585 aa9.13□□□□□ -0.95
GGA3-209ENST00000580646 MC3RP41968 323 aa9.13□□□□□ -0.95
GGA3-209ENST00000580646 PPICP45877 212 aa9.13□□□□□ -0.95
GGA3-209ENST00000580646 HLCSP50747 726 aa9.13□□□□□ -0.95
GGA3-209ENST00000580646 SSR4P51571 173 aa9.13□□□□□ -0.95
GGA3-209ENST00000580646 POLR2JP52435 117 aaKnown RBP9.13□□□□□ -0.95
GGA3-209ENST00000580646 GNGT1P63211 74 aa9.13□□□□□ -0.95
GGA3-209ENST00000580646 HSPB3Q12988 150 aa9.13□□□□□ -0.95
GGA3-209ENST00000580646 DUSP8Q13202 625 aa9.13□□□□□ -0.95
GGA3-209ENST00000580646 TUBA3CQ13748 450 aa9.13□□□□□ -0.95
GGA3-209ENST00000580646 RCAN2Q14206 197 aa9.13□□□□□ -0.95
GGA3-209ENST00000580646 PGS1Q32NB8 556 aa9.13□□□□□ -0.95
GGA3-209ENST00000580646 PIGGQ5H8A4 983 aa9.13□□□□□ -0.95
GGA3-209ENST00000580646 ZNF766Q5HY98 468 aa9.13□□□□□ -0.95
GGA3-209ENST00000580646 SPANXN4Q5MJ08 99 aa9.13□□□□□ -0.95
GGA3-209ENST00000580646 HLA-DQA1Q5Y7H0 255 aa9.13□□□□□ -0.95
GGA3-209ENST00000580646 OR4F3Q6IEY1 312 aa9.13□□□□□ -0.95
GGA3-209ENST00000580646 TUBA3EQ6PEY2 450 aa9.13□□□□□ -0.95
GGA3-209ENST00000580646 BHLHB9Q6PI77 547 aa9.13□□□□□ -0.95
GGA3-209ENST00000580646 OPN5Q6U736 354 aa9.13□□□□□ -0.95
GGA3-209ENST00000580646 TMEM107Q6UX40 140 aa9.13□□□□□ -0.95
GGA3-209ENST00000580646 TAGAPQ8N103 731 aa9.13□□□□□ -0.95
GGA3-209ENST00000580646 CPSF7Q8N684 471 aaKnown RBP9.13□□□□□ -0.95
GGA3-209ENST00000580646 OR52R1Q8NGF1 315 aa9.13□□□□□ -0.95
GGA3-209ENST00000580646 OR56A1Q8NGH5 318 aa9.13□□□□□ -0.95
GGA3-209ENST00000580646 SLC22A8Q8TCC7 542 aa9.13□□□□□ -0.95
GGA3-209ENST00000580646 TSPEARQ8WU66 669 aa9.13□□□□□ -0.95
GGA3-209ENST00000580646 C10orf82Q8WW14 230 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms