RNA–Protein interactions for RNA: ENST00000555363.1

SEC23A-209, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 2

Gene SEC23A, Length 704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-209ENST00000555363 PTGFRP43088 359 aa4.78□□□□□ -1.64
SEC23A-209ENST00000555363 NAPAP54920 295 aa4.78□□□□□ -1.64
SEC23A-209ENST00000555363 AIF1P55008 147 aa4.78□□□□□ -1.64
SEC23A-209ENST00000555363 ATP5IP56385 69 aaPredicted RBP4.78□□□□□ -1.64
SEC23A-209ENST00000555363 HEPACAMQ14CZ8 416 aa4.78□□□□□ -1.64
SEC23A-209ENST00000555363 EXT1Q16394 746 aa4.78□□□□□ -1.64
SEC23A-209ENST00000555363 MPPE1Q53F39 396 aa4.78□□□□□ -1.64
SEC23A-209ENST00000555363 ZNF776Q68DI1 518 aaPredicted RBP4.78□□□□□ -1.64
SEC23A-209ENST00000555363 SLC27A4Q6P1M0 643 aa4.78□□□□□ -1.64
SEC23A-209ENST00000555363 CBLN3Q6UW01 205 aa4.78□□□□□ -1.64
SEC23A-209ENST00000555363 C5orf24Q7Z6I8 188 aa4.78□□□□□ -1.64
SEC23A-209ENST00000555363 ISCA2Q86U28 154 aa4.78□□□□□ -1.64
SEC23A-209ENST00000555363 NFE4Q86UQ8 179 aa4.78□□□□□ -1.64
SEC23A-209ENST00000555363 BBS5Q8N3I7 341 aa4.78□□□□□ -1.64
SEC23A-209ENST00000555363 BHLHE23Q8NDY6 225 aa4.78□□□□□ -1.64
SEC23A-209ENST00000555363 OR13A1Q8NGR1 328 aa4.78□□□□□ -1.64
SEC23A-209ENST00000555363 MCHR2Q969V1 340 aa4.78□□□□□ -1.64
SEC23A-209ENST00000555363 TMEM45BQ96B21 275 aa4.78□□□□□ -1.64
SEC23A-209ENST00000555363 NXPE2Q96DL1 559 aa4.78□□□□□ -1.64
SEC23A-209ENST00000555363 MRPL53Q96EL3 112 aaKnown RBP4.78□□□□□ -1.64
SEC23A-209ENST00000555363 SLC41A3Q96GZ6 507 aa4.78□□□□□ -1.64
SEC23A-209ENST00000555363 DHTKD1Q96HY7 919 aaPredicted RBP4.78□□□□□ -1.64
SEC23A-209ENST00000555363 C4orf36Q96KX1 117 aa4.78□□□□□ -1.64
SEC23A-209ENST00000555363 TCEANC2Q96MN5 208 aa4.78□□□□□ -1.64
SEC23A-209ENST00000555363 S1PR3Q99500 378 aa4.78□□□□□ -1.64
SEC23A-209ENST00000555363 FUNDC2Q9BWH2 189 aa4.78□□□□□ -1.64
SEC23A-209ENST00000555363 TBC1D10AQ9BXI6 508 aa4.78□□□□□ -1.64
SEC23A-209ENST00000555363 RNF41Q9H4P4 317 aaPredicted RBP4.78□□□□□ -1.64
SEC23A-209ENST00000555363 EGLN3Q9H6Z9 239 aa4.78□□□□□ -1.64
SEC23A-209ENST00000555363 TBC1D13Q9NVG8 400 aa4.78□□□□□ -1.64
SEC23A-209ENST00000555363 DDX18Q9NVP1 670 aaKnown RBP4.78□□□□□ -1.64
SEC23A-209ENST00000555363 RDH8Q9NYR8 311 aa4.78□□□□□ -1.64
SEC23A-209ENST00000555363 ERVK-18Q9QC07 812 aa4.78□□□□□ -1.64
SEC23A-209ENST00000555363 PRDM4Q9UKN5 801 aa4.78□□□□□ -1.64
SEC23A-209ENST00000555363 GRID1Q9ULK0 1009 aa4.78□□□□□ -1.64
SEC23A-209ENST00000555363 ETV7Q9Y603 341 aa4.78□□□□□ -1.64
SEC23A-209ENST00000555363 RGPD5Q99666 1765 aa4.78□□□□□ -1.64
SEC23A-209ENST00000555363 ELP1O95163 1332 aa4.77□□□□□ -1.65
SEC23A-209ENST00000555363 UMODL1Q5DID0 1318 aa4.77□□□□□ -1.65
SEC23A-209ENST00000555363 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.77□□□□□ -1.65
SEC23A-209ENST00000555363 ATP6AP2A0A1C7CYW4 349 aa4.77□□□□□ -1.65
SEC23A-209ENST00000555363 GOLGA6L4A6NEF3 574 aa4.77□□□□□ -1.65
SEC23A-209ENST00000555363 FAM25EA8MYX2 175 aa4.77□□□□□ -1.65
SEC23A-209ENST00000555363 ZNF732B4DXR9 585 aa4.77□□□□□ -1.65
SEC23A-209ENST00000555363 RNF113AO15541 343 aaKnown RBP4.77□□□□□ -1.65
SEC23A-209ENST00000555363 DCXO43602 365 aa4.77□□□□□ -1.65
SEC23A-209ENST00000555363 B4GALT2O60909 372 aa4.77□□□□□ -1.65
SEC23A-209ENST00000555363 SDC3O75056 442 aa4.77□□□□□ -1.65
SEC23A-209ENST00000555363 TSHBP01222 138 aa4.77□□□□□ -1.65
SEC23A-209ENST00000555363 IL1BP01584 269 aa4.77□□□□□ -1.65
SEC23A-209ENST00000555363 CRYAAP02489 173 aa4.77□□□□□ -1.65
SEC23A-209ENST00000555363 TPM3P06753 285 aa4.77□□□□□ -1.65
SEC23A-209ENST00000555363 PAX7P23759 505 aa4.77□□□□□ -1.65
SEC23A-209ENST00000555363 GJB2P29033 226 aa4.77□□□□□ -1.65
SEC23A-209ENST00000555363 CEACAM8P31997 349 aaPredicted RBP4.77□□□□□ -1.65
SEC23A-209ENST00000555363 ACADVLP49748 655 aa4.77□□□□□ -1.65
SEC23A-209ENST00000555363 SH3BGRP55822 239 aaPredicted RBP4.77□□□□□ -1.65
SEC23A-209ENST00000555363 ACTR3P61158 418 aa4.77□□□□□ -1.65
SEC23A-209ENST00000555363 CBX1P83916 185 aa4.77□□□□□ -1.65
SEC23A-209ENST00000555363 CCDC173Q0VFZ6 552 aa4.77□□□□□ -1.65
SEC23A-209ENST00000555363 GPR17Q13304 367 aa4.77□□□□□ -1.65
SEC23A-209ENST00000555363 ITGA9Q13797 1035 aa4.77□□□□□ -1.65
SEC23A-209ENST00000555363 CEACAM7Q14002 265 aa4.77□□□□□ -1.65
SEC23A-209ENST00000555363 TATDN3Q17R31 274 aa4.77□□□□□ -1.65
SEC23A-209ENST00000555363 CAVIN4Q5BKX8 364 aa4.77□□□□□ -1.65
SEC23A-209ENST00000555363 TECRLQ5HYJ1 363 aa4.77□□□□□ -1.65
SEC23A-209ENST00000555363 ZNF311Q5JNZ3 666 aa4.77□□□□□ -1.65
SEC23A-209ENST00000555363 LIPKQ5VXJ0 399 aa4.77□□□□□ -1.65
SEC23A-209ENST00000555363 OR4C11Q6IEV9 310 aa4.77□□□□□ -1.65
SEC23A-209ENST00000555363 METAP1DQ6UB28 335 aaPredicted RBP4.77□□□□□ -1.65
SEC23A-209ENST00000555363 CEACAM20Q6UY09 585 aa4.77□□□□□ -1.65
SEC23A-209ENST00000555363 FOXL2NBQ6ZUU3 175 aa4.77□□□□□ -1.65
SEC23A-209ENST00000555363 SLC24A5Q71RS6 500 aa4.77□□□□□ -1.65
SEC23A-209ENST00000555363 PIGZQ86VD9 579 aa4.77□□□□□ -1.65
SEC23A-209ENST00000555363 VPS36Q86VN1 386 aa4.77□□□□□ -1.65
SEC23A-209ENST00000555363 ZC3H3Q8IXZ2 948 aaKnown RBP4.77□□□□□ -1.65
SEC23A-209ENST00000555363 KIRREL3Q8IZU9 778 aa4.77□□□□□ -1.65
SEC23A-209ENST00000555363 GPC2Q8N158 579 aa4.77□□□□□ -1.65
SEC23A-209ENST00000555363 FAM89BQ8N5H3 189 aa4.77□□□□□ -1.65
SEC23A-209ENST00000555363 SLC37A3Q8NCC5 494 aa4.77□□□□□ -1.65
SEC23A-209ENST00000555363 ZNF397Q8NF99 534 aaPredicted RBP4.77□□□□□ -1.65
SEC23A-209ENST00000555363 DMBX1Q8NFW5 382 aa4.77□□□□□ -1.65
SEC23A-209ENST00000555363 OR4L1Q8NH43 312 aa4.77□□□□□ -1.65
SEC23A-209ENST00000555363 AZIN2Q96A70 460 aa4.77□□□□□ -1.65
SEC23A-209ENST00000555363 TMEM143Q96AN5 459 aa4.77□□□□□ -1.65
SEC23A-209ENST00000555363 FBXO17Q96EF6 278 aa4.77□□□□□ -1.65
SEC23A-209ENST00000555363 GIMAP5Q96F15 307 aa4.77□□□□□ -1.65
SEC23A-209ENST00000555363 ZNF274Q96GC6 653 aaPredicted RBP4.77□□□□□ -1.65
SEC23A-209ENST00000555363 PIWIL1Q96J94 861 aaKnown RBP4.77□□□□□ -1.65
SEC23A-209ENST00000555363 CXorf58Q96LI9 332 aa4.77□□□□□ -1.65
SEC23A-209ENST00000555363 VPS35Q96QK1 796 aa4.77□□□□□ -1.65
SEC23A-209ENST00000555363 RAB40CQ96S21 281 aa4.77□□□□□ -1.65
SEC23A-209ENST00000555363 CRNKL1Q9BZJ0 848 aaKnown RBP4.77□□□□□ -1.65
SEC23A-209ENST00000555363 BOLA2Q9H3K6 86 aa4.77□□□□□ -1.65
SEC23A-209ENST00000555363 VIPAS39Q9H9C1 493 aa4.77□□□□□ -1.65
SEC23A-209ENST00000555363 AIPL1Q9NZN9 384 aa4.77□□□□□ -1.65
SEC23A-209ENST00000555363 BAIAP2L1Q9UHR4 511 aa4.77□□□□□ -1.65
SEC23A-209ENST00000555363 TRMT112Q9UI30 125 aaKnown RBP4.77□□□□□ -1.65
SEC23A-209ENST00000555363 PILRAQ9UKJ1 303 aa4.77□□□□□ -1.65
SEC23A-209ENST00000555363 CLEC4AQ9UMR7 237 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms