RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 WDR53Q7Z5U6 358 aaPredicted RBP26.74■■□□□ 1.87
BRF1-213ENST00000548421 PTRH1Q86Y79 214 aaKnown RBP26.74■■□□□ 1.87
BRF1-213ENST00000548421 MICU2Q8IYU8 434 aa26.74■■□□□ 1.87
BRF1-213ENST00000548421 SLC16A11Q8NCK7 471 aa26.74■■□□□ 1.87
BRF1-213ENST00000548421 HOXB13Q92826 284 aaPredicted RBP26.74■■□□□ 1.87
BRF1-213ENST00000548421 RAB8BQ92930 207 aa26.74■■□□□ 1.87
BRF1-213ENST00000548421 OTUB1Q96FW1 271 aaPredicted RBP26.74■■□□□ 1.87
BRF1-213ENST00000548421 VSTM2LQ96N03 204 aa26.74■■□□□ 1.87
BRF1-213ENST00000548421 LMF2Q9BU23 707 aaKnown RBP26.74■■□□□ 1.87
BRF1-213ENST00000548421 SEMA4CQ9C0C4 833 aa26.74■■□□□ 1.87
BRF1-213ENST00000548421 MSRB2Q9Y3D2 182 aa26.74■■□□□ 1.87
BRF1-213ENST00000548421 OR6C76A6NM76 312 aa26.73■■□□□ 1.87
BRF1-213ENST00000548421 AGR2O95994 175 aa26.73■■□□□ 1.87
BRF1-213ENST00000548421 ACP2P11117 423 aa26.73■■□□□ 1.87
BRF1-213ENST00000548421 SOX11P35716 441 aa26.73■■□□□ 1.87
BRF1-213ENST00000548421 SLC26A5P58743 744 aa26.73■■□□□ 1.87
BRF1-213ENST00000548421 RBBP4Q09028 425 aa26.73■■□□□ 1.87
BRF1-213ENST00000548421 ZNHIT3Q15649 155 aaPredicted RBP26.73■■□□□ 1.87
BRF1-213ENST00000548421 FXNQ16595 210 aa26.73■■□□□ 1.87
BRF1-213ENST00000548421 VMACQ2NL98 169 aa26.73■■□□□ 1.87
BRF1-213ENST00000548421 C11orf65Q8NCR3 313 aa26.73■■□□□ 1.87
BRF1-213ENST00000548421 OR11G2Q8NGC1 345 aa26.73■■□□□ 1.87
BRF1-213ENST00000548421 XAGE5Q8WWM1 108 aa26.73■■□□□ 1.87
BRF1-213ENST00000548421 MAL2Q969L2 176 aa26.73■■□□□ 1.87
BRF1-213ENST00000548421 VMP1Q96GC9 406 aa26.73■■□□□ 1.87
BRF1-213ENST00000548421 STACQ99469 402 aa26.73■■□□□ 1.87
BRF1-213ENST00000548421 EFHD1Q9BUP0 239 aa26.73■■□□□ 1.87
BRF1-213ENST00000548421 A4GALTQ9NPC4 353 aa26.73■■□□□ 1.87
BRF1-213ENST00000548421 GIN1Q9NXP7 522 aa26.73■■□□□ 1.87
BRF1-213ENST00000548421 EGFL7Q9UHF1 273 aa26.73■■□□□ 1.87
BRF1-213ENST00000548421 IL17BQ9UHF5 180 aa26.73■■□□□ 1.87
BRF1-213ENST00000548421 POMPQ9Y244 141 aa26.73■■□□□ 1.87
BRF1-213ENST00000548421 DTX4Q9Y2E6 619 aa26.73■■□□□ 1.87
BRF1-213ENST00000548421 ALOX5P09917 674 aa26.72■■□□□ 1.87
BRF1-213ENST00000548421 MAP3K8P41279 467 aa26.72■■□□□ 1.87
BRF1-213ENST00000548421 IL10RAQ13651 578 aa26.72■■□□□ 1.87
BRF1-213ENST00000548421 RAB43Q86YS6 212 aa26.72■■□□□ 1.87
BRF1-213ENST00000548421 APCDD1LQ8NCL9 501 aa26.72■■□□□ 1.87
BRF1-213ENST00000548421 VPS50Q96JG6 964 aa26.72■■□□□ 1.87
BRF1-213ENST00000548421 PCDHAC1Q9H158 963 aa26.72■■□□□ 1.87
BRF1-213ENST00000548421 MUC13Q9H3R2 512 aa26.72■■□□□ 1.87
BRF1-213ENST00000548421 PIGUQ9H490 435 aa26.72■■□□□ 1.87
BRF1-213ENST00000548421 DUSP22Q9NRW4 184 aa26.72■■□□□ 1.87
BRF1-213ENST00000548421 P2RX2Q9UBL9 471 aa26.72■■□□□ 1.87
BRF1-213ENST00000548421 TTC36A6NLP5 189 aa26.71■■□□□ 1.87
BRF1-213ENST00000548421 CREG1O75629 220 aa26.71■■□□□ 1.87
BRF1-213ENST00000548421 SOX30O94993 753 aa26.71■■□□□ 1.87
BRF1-213ENST00000548421 ARAFP10398 606 aa26.71■■□□□ 1.87
BRF1-213ENST00000548421 LIFP15018 202 aa26.71■■□□□ 1.87
BRF1-213ENST00000548421 MYBPC3Q14896 1274 aa26.71■■□□□ 1.87
BRF1-213ENST00000548421 DUSP5Q16690 384 aa26.71■■□□□ 1.87
BRF1-213ENST00000548421 ZNF630Q2M218 657 aaPredicted RBP26.71■■□□□ 1.87
BRF1-213ENST00000548421 NDUFAF7Q7L592 441 aa26.71■■□□□ 1.87
BRF1-213ENST00000548421 SLC35A4Q96G79 324 aa26.71■■□□□ 1.87
BRF1-213ENST00000548421 ITPAQ9BY32 194 aa26.71■■□□□ 1.87
BRF1-213ENST00000548421 PCDHGB3Q9Y5G1 929 aa26.71■■□□□ 1.87
BRF1-213ENST00000548421 TMEM247A6NEH6 219 aa26.7■■□□□ 1.87
BRF1-213ENST00000548421 GSTA4O15217 222 aa26.7■■□□□ 1.87
BRF1-213ENST00000548421 PCGF2P35227 344 aa26.7■■□□□ 1.87
BRF1-213ENST00000548421 MS4A2Q01362 244 aa26.7■■□□□ 1.87
BRF1-213ENST00000548421 TRAP1Q12931 704 aaKnown RBP26.7■■□□□ 1.87
BRF1-213ENST00000548421 EXT1Q16394 746 aa26.7■■□□□ 1.87
BRF1-213ENST00000548421 ATAD3BQ5T9A4 648 aa26.7■■□□□ 1.87
BRF1-213ENST00000548421 C1orf146Q5VVC0 180 aa26.7■■□□□ 1.87
BRF1-213ENST00000548421 SLC29A4Q7RTT9 530 aa26.7■■□□□ 1.87
BRF1-213ENST00000548421 C9orf40Q8IXQ3 194 aa26.7■■□□□ 1.87
BRF1-213ENST00000548421 FAM13CQ8NE31 585 aa26.7■■□□□ 1.87
BRF1-213ENST00000548421 IMMP1LQ96LU5 166 aa26.7■■□□□ 1.87
BRF1-213ENST00000548421 EXD2Q9NVH0 621 aa26.7■■□□□ 1.87
BRF1-213ENST00000548421 MAGEL2Q9UJ55 1249 aa26.7■■□□□ 1.87
BRF1-213ENST00000548421 SNX13Q9Y5W8 968 aa26.7■■□□□ 1.87
BRF1-213ENST00000548421 ASPMQ8IZT6 3477 aa26.7■■□□□ 1.86
BRF1-213ENST00000548421 FREM2Q5SZK8 3169 aa26.69■■□□□ 1.86
BRF1-213ENST00000548421 NSG1A0A0A6YYJ2 146 aa26.69■■□□□ 1.86
BRF1-213ENST00000548421 NKX2-2O95096 273 aa26.69■■□□□ 1.86
BRF1-213ENST00000548421 TFPTP0C1Z6 253 aa26.69■■□□□ 1.86
BRF1-213ENST00000548421 GGT1P19440 569 aa26.69■■□□□ 1.86
BRF1-213ENST00000548421 CDK6Q00534 326 aa26.69■■□□□ 1.86
BRF1-213ENST00000548421 PSG6Q00889 435 aa26.69■■□□□ 1.86
BRF1-213ENST00000548421 SCARB2Q14108 478 aa26.69■■□□□ 1.86
BRF1-213ENST00000548421 VEZF1Q14119 521 aa26.69■■□□□ 1.86
BRF1-213ENST00000548421 EBPQ15125 230 aaKnown RBP26.69■■□□□ 1.86
BRF1-213ENST00000548421 MRGPREQ86SM8 312 aa26.69■■□□□ 1.86
BRF1-213ENST00000548421 SLC30A8Q8IWU4 369 aa26.69■■□□□ 1.86
BRF1-213ENST00000548421 GPR151Q8TDV0 419 aa26.69■■□□□ 1.86
BRF1-213ENST00000548421 SLC38A5Q8WUX1 472 aa26.69■■□□□ 1.86
BRF1-213ENST00000548421 CDS1Q92903 461 aa26.69■■□□□ 1.86
BRF1-213ENST00000548421 BTBD9Q96Q07 612 aa26.69■■□□□ 1.86
BRF1-213ENST00000548421 WDR70Q9NW82 654 aa26.69■■□□□ 1.86
BRF1-213ENST00000548421 LIPT1Q9Y234 373 aa26.69■■□□□ 1.86
BRF1-213ENST00000548421 KCNE3Q9Y6H6 103 aa26.69■■□□□ 1.86
BRF1-213ENST00000548421 GMNNO75496 209 aa26.68■■□□□ 1.86
BRF1-213ENST00000548421 STAMBPO95630 424 aa26.68■■□□□ 1.86
BRF1-213ENST00000548421 CLCN2P51788 898 aa26.68■■□□□ 1.86
BRF1-213ENST00000548421 CORO7P57737 925 aa26.68■■□□□ 1.86
BRF1-213ENST00000548421 PLAG1Q6DJT9 500 aa26.68■■□□□ 1.86
BRF1-213ENST00000548421 HSDL2Q6YN16 418 aa26.68■■□□□ 1.86
BRF1-213ENST00000548421 METTL25Q8N6Q8 603 aa26.68■■□□□ 1.86
BRF1-213ENST00000548421 COX18Q8N8Q8 333 aa26.68■■□□□ 1.86
BRF1-213ENST00000548421 NFKBIDQ8NI38 313 aa26.68■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms