RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	ZSCAN5DP	P0CG00	497 aa		4.76	□□□□□ -1.65
SEC13-219	ENST00000492602	SMIM10L1	P0DMW3	83 aa		4.76	□□□□□ -1.65
SEC13-219	ENST00000492602	CDH1	P12830	882 aa		4.76	□□□□□ -1.65
SEC13-219	ENST00000492602	ENO3	P13929	434 aa	Predicted RBP	4.76	□□□□□ -1.65
SEC13-219	ENST00000492602	SAT1	P21673	171 aa		4.76	□□□□□ -1.65
SEC13-219	ENST00000492602	PRTN3	P24158	256 aa		4.76	□□□□□ -1.65
SEC13-219	ENST00000492602	CCND1	P24385	295 aa		4.76	□□□□□ -1.65
SEC13-219	ENST00000492602	PSMA3	P25788	255 aa		4.76	□□□□□ -1.65
SEC13-219	ENST00000492602	IMPA1	P29218	277 aa		4.76	□□□□□ -1.65
SEC13-219	ENST00000492602	ATP5D	P30049	168 aa		4.76	□□□□□ -1.65
SEC13-219	ENST00000492602	TERF1	P54274	439 aa		4.76	□□□□□ -1.65
SEC13-219	ENST00000492602	TPD52	P55327	224 aa	Predicted RBP	4.76	□□□□□ -1.65
SEC13-219	ENST00000492602	CTBP2	P56545	445 aa		4.76	□□□□□ -1.65
SEC13-219	ENST00000492602	SLC37A1	P57057	533 aa		4.76	□□□□□ -1.65
SEC13-219	ENST00000492602	RAB38	P57729	211 aa		4.76	□□□□□ -1.65
SEC13-219	ENST00000492602	TBPL1	P62380	186 aa		4.76	□□□□□ -1.65
SEC13-219	ENST00000492602	RPP38	P78345	283 aa	Known RBP	4.76	□□□□□ -1.65
SEC13-219	ENST00000492602	KCNJ11	Q14654	390 aa		4.76	□□□□□ -1.65
SEC13-219	ENST00000492602	SETDB1	Q15047	1291 aa		4.76	□□□□□ -1.65
SEC13-219	ENST00000492602	P2RY6	Q15077	328 aa		4.76	□□□□□ -1.65
SEC13-219	ENST00000492602	PPP1R7	Q15435	360 aa		4.76	□□□□□ -1.65
SEC13-219	ENST00000492602	GUSBP1	Q15486	140 aa		4.76	□□□□□ -1.65
SEC13-219	ENST00000492602	TUSC1	Q2TAM9	212 aa		4.76	□□□□□ -1.65
SEC13-219	ENST00000492602	KLHL38	Q2WGJ6	581 aa		4.76	□□□□□ -1.65
SEC13-219	ENST00000492602	NEPRO	Q6NW34	567 aa		4.76	□□□□□ -1.65
SEC13-219	ENST00000492602	LEG1	Q6P5S2	330 aa		4.76	□□□□□ -1.65
SEC13-219	ENST00000492602	SLC22A25	Q6T423	547 aa		4.76	□□□□□ -1.65
SEC13-219	ENST00000492602	CES3	Q6UWW8	571 aa		4.76	□□□□□ -1.65
SEC13-219	ENST00000492602	RBMS3	Q6XE24	437 aa	Known RBP	4.76	□□□□□ -1.65
SEC13-219	ENST00000492602	RHOU	Q7L0Q8	258 aa		4.76	□□□□□ -1.65
SEC13-219	ENST00000492602	SLC29A4	Q7RTT9	530 aa		4.76	□□□□□ -1.65
SEC13-219	ENST00000492602	TAGAP	Q8N103	731 aa		4.76	□□□□□ -1.65
SEC13-219	ENST00000492602	TEX29	Q8N6K0	151 aa		4.76	□□□□□ -1.65
SEC13-219	ENST00000492602	C7orf57	Q8NEG2	295 aa		4.76	□□□□□ -1.65
SEC13-219	ENST00000492602	NT5C	Q8TCD5	201 aa		4.76	□□□□□ -1.65
SEC13-219	ENST00000492602	MAGOHB	Q96A72	148 aa	Known RBP	4.76	□□□□□ -1.65
SEC13-219	ENST00000492602	SMIM10	Q96HG1	83 aa		4.76	□□□□□ -1.65
SEC13-219	ENST00000492602	SENP5	Q96HI0	755 aa	Predicted RBP	4.76	□□□□□ -1.65
SEC13-219	ENST00000492602	RADIL	Q96JH8	1075 aa		4.76	□□□□□ -1.65
SEC13-219	ENST00000492602	FAR2	Q96K12	515 aa		4.76	□□□□□ -1.65
SEC13-219	ENST00000492602	SORCS2	Q96PQ0	1159 aa		4.76	□□□□□ -1.65
SEC13-219	ENST00000492602	NAT9	Q9BTE0	207 aa		4.76	□□□□□ -1.65
SEC13-219	ENST00000492602	HDHD5	Q9BXW7	423 aa		4.76	□□□□□ -1.65
SEC13-219	ENST00000492602	KLHL31	Q9H511	634 aa		4.76	□□□□□ -1.65
SEC13-219	ENST00000492602	METTL7A	Q9H8H3	244 aa		4.76	□□□□□ -1.65
SEC13-219	ENST00000492602	MYOZ1	Q9NP98	299 aa	Predicted RBP	4.76	□□□□□ -1.65
SEC13-219	ENST00000492602	LZTFL1	Q9NQ48	299 aa		4.76	□□□□□ -1.65
SEC13-219	ENST00000492602	PPAN	Q9NQ55	473 aa	Known RBP	4.76	□□□□□ -1.65
SEC13-219	ENST00000492602	TAS2R13	Q9NYV9	303 aa		4.76	□□□□□ -1.65
SEC13-219	ENST00000492602	JRKL	Q9Y4A0	524 aa		4.76	□□□□□ -1.65
SEC13-219	ENST00000492602		A0A088AWK7	358 aa		4.75	□□□□□ -1.65
SEC13-219	ENST00000492602	IQANK1	A0A1B0GTG1	560 aa		4.75	□□□□□ -1.65
SEC13-219	ENST00000492602	C4orf51	C9J302	202 aa		4.75	□□□□□ -1.65
SEC13-219	ENST00000492602	HRK	O00198	91 aa		4.75	□□□□□ -1.65
SEC13-219	ENST00000492602	DYRK3	O43781	588 aa		4.75	□□□□□ -1.65
SEC13-219	ENST00000492602	LDB3	O75112	727 aa		4.75	□□□□□ -1.65
SEC13-219	ENST00000492602	CDH16	O75309	829 aa		4.75	□□□□□ -1.65
SEC13-219	ENST00000492602	TNFRSF21	O75509	655 aa		4.75	□□□□□ -1.65
SEC13-219	ENST00000492602	AQP8	O94778	261 aa		4.75	□□□□□ -1.65
SEC13-219	ENST00000492602	STAMBP	O95630	424 aa		4.75	□□□□□ -1.65
SEC13-219	ENST00000492602	TSPAN15	O95858	294 aa		4.75	□□□□□ -1.65
SEC13-219	ENST00000492602	IGKV3-11	P04433	115 aa		4.75	□□□□□ -1.65
SEC13-219	ENST00000492602	MLN	P12872	115 aa		4.75	□□□□□ -1.65
SEC13-219	ENST00000492602	PEPD	P12955	493 aa		4.75	□□□□□ -1.65
SEC13-219	ENST00000492602	COX7A2	P14406	83 aa		4.75	□□□□□ -1.65
SEC13-219	ENST00000492602	ZNF10	P21506	573 aa	Predicted RBP	4.75	□□□□□ -1.65
SEC13-219	ENST00000492602	RPS3	P23396	243 aa	Known RBP eCLIP	4.75	□□□□□ -1.65	2e-12	■■■□□ 18.3
SEC13-219	ENST00000492602	OMG	P23515	440 aa		4.75	□□□□□ -1.65
SEC13-219	ENST00000492602	ARNT	P27540	789 aa		4.75	□□□□□ -1.65
SEC13-219	ENST00000492602	NMBR	P28336	390 aa		4.75	□□□□□ -1.65
SEC13-219	ENST00000492602	RPL22	P35268	128 aa	Known RBP	4.75	□□□□□ -1.65
SEC13-219	ENST00000492602	GGT5	P36269	586 aa		4.75	□□□□□ -1.65
SEC13-219	ENST00000492602	PGGT1B	P53609	377 aa		4.75	□□□□□ -1.65
SEC13-219	ENST00000492602	CLDN15	P56746	228 aa		4.75	□□□□□ -1.65
SEC13-219	ENST00000492602	EEFSEC	P57772	596 aa	Known RBP	4.75	□□□□□ -1.65
SEC13-219	ENST00000492602	ID2	Q02363	134 aa		4.75	□□□□□ -1.65
SEC13-219	ENST00000492602	SERTAD2	Q14140	314 aa		4.75	□□□□□ -1.65
SEC13-219	ENST00000492602	DHX34	Q14147	1143 aa	Known RBP	4.75	□□□□□ -1.65
SEC13-219	ENST00000492602	TRIP10	Q15642	601 aa		4.75	□□□□□ -1.65
SEC13-219	ENST00000492602	STK11	Q15831	433 aa		4.75	□□□□□ -1.65
SEC13-219	ENST00000492602	BCL2A1	Q16548	175 aa		4.75	□□□□□ -1.65
SEC13-219	ENST00000492602	SGCB	Q16585	318 aa		4.75	□□□□□ -1.65
SEC13-219	ENST00000492602	ACSBG2	Q5FVE4	666 aa		4.75	□□□□□ -1.65
SEC13-219	ENST00000492602	CTSL3P	Q5NE16	218 aa		4.75	□□□□□ -1.65
SEC13-219	ENST00000492602	SFRP5	Q5T4F7	317 aa		4.75	□□□□□ -1.65
SEC13-219	ENST00000492602	DEPDC1	Q5TB30	811 aa		4.75	□□□□□ -1.65
SEC13-219	ENST00000492602	C1orf229	Q6ZS94	237 aa	Predicted RBP	4.75	□□□□□ -1.65
SEC13-219	ENST00000492602	KIR3DL3	Q8N743	410 aa		4.75	□□□□□ -1.65
SEC13-219	ENST00000492602	ANKS4B	Q8N8V4	417 aa		4.75	□□□□□ -1.65
SEC13-219	ENST00000492602	DOK4	Q8TEW6	326 aa		4.75	□□□□□ -1.65
SEC13-219	ENST00000492602	WFDC12	Q8WWY7	111 aa		4.75	□□□□□ -1.65
SEC13-219	ENST00000492602	GTF3A	Q92664	365 aa	Known RBP	4.75	□□□□□ -1.65
SEC13-219	ENST00000492602	PPWD1	Q96BP3	646 aa	Known RBP	4.75	□□□□□ -1.65
SEC13-219	ENST00000492602	LRRC37B	Q96QE4	947 aa		4.75	□□□□□ -1.65
SEC13-219	ENST00000492602	CSF3R	Q99062	836 aa		4.75	□□□□□ -1.65
SEC13-219	ENST00000492602	VRK1	Q99986	396 aa	Predicted RBP	4.75	□□□□□ -1.65
SEC13-219	ENST00000492602	DESI2	Q9BSY9	194 aa		4.75	□□□□□ -1.65
SEC13-219	ENST00000492602	HAUS8	Q9BT25	410 aa		4.75	□□□□□ -1.65
SEC13-219	ENST00000492602	FAM167B	Q9BTA0	163 aa		4.75	□□□□□ -1.65
SEC13-219	ENST00000492602	KIFC1	Q9BW19	673 aa		4.75	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms