RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 TRMT10AQ8TBZ6 339 aaKnown RBP5.64□□□□□ -1.51
SMC5-202ENST00000471372 EMG1Q92979 244 aaKnown RBP5.64□□□□□ -1.51
SMC5-202ENST00000471372 DLX4Q92988 240 aaPredicted RBP5.64□□□□□ -1.51
SMC5-202ENST00000471372 LHX4Q969G2 390 aa5.64□□□□□ -1.51
SMC5-202ENST00000471372 UPRTQ96BW1 309 aa5.64□□□□□ -1.51
SMC5-202ENST00000471372 AKR1E2Q96JD6 320 aa5.64□□□□□ -1.51
SMC5-202ENST00000471372 RPP25Q9BUL9 199 aaKnown RBP5.64□□□□□ -1.51
SMC5-202ENST00000471372 TBC1D10AQ9BXI6 508 aa5.64□□□□□ -1.51
SMC5-202ENST00000471372 ZNF556Q9HAH1 456 aa5.64□□□□□ -1.51
SMC5-202ENST00000471372 APMAPQ9HDC9 416 aa5.64□□□□□ -1.51
SMC5-202ENST00000471372 RAB18Q9NP72 206 aa5.64□□□□□ -1.51
SMC5-202ENST00000471372 HYPKQ9NX55 129 aa5.64□□□□□ -1.51
SMC5-202ENST00000471372 BAIAP2L1Q9UHR4 511 aa5.64□□□□□ -1.51
SMC5-202ENST00000471372 ATP10DQ9P241 1426 aa5.64□□□□□ -1.51
SMC5-202ENST00000471372 PPIAL4CA0A0B4J2A2 164 aa5.63□□□□□ -1.51
SMC5-202ENST00000471372 CTAGE15A4D2H0 777 aa5.63□□□□□ -1.51
SMC5-202ENST00000471372 BLOC1S5-TXNDC5H3BN57 136 aa5.63□□□□□ -1.51
SMC5-202ENST00000471372 K7ERI5 159 aa5.63□□□□□ -1.51
SMC5-202ENST00000471372 CYB561D2O14569 222 aa5.63□□□□□ -1.51
SMC5-202ENST00000471372 EI24O14681 340 aa5.63□□□□□ -1.51
SMC5-202ENST00000471372 ACOT8O14734 319 aa5.63□□□□□ -1.51
SMC5-202ENST00000471372 DUX1O43812 170 aa5.63□□□□□ -1.51
SMC5-202ENST00000471372 LMX1BO60663 402 aa5.63□□□□□ -1.51
SMC5-202ENST00000471372 B4GALT2O60909 372 aa5.63□□□□□ -1.51
SMC5-202ENST00000471372 MTRF1O75570 445 aaKnown RBP5.63□□□□□ -1.51
SMC5-202ENST00000471372 IGSF6O95976 241 aa5.63□□□□□ -1.51
SMC5-202ENST00000471372 PPIAL4GP0DN37 164 aa5.63□□□□□ -1.51
SMC5-202ENST00000471372 CDK4P11802 303 aa5.63□□□□□ -1.51
SMC5-202ENST00000471372 TIMP3P35625 211 aa5.63□□□□□ -1.51
SMC5-202ENST00000471372 TSFMP43897 325 aaKnown RBP5.63□□□□□ -1.51
SMC5-202ENST00000471372 MRPL28Q13084 256 aaKnown RBP5.63□□□□□ -1.51
SMC5-202ENST00000471372 KNOP1Q1ED39 458 aaKnown RBP5.63□□□□□ -1.51
SMC5-202ENST00000471372 SEL1L3Q68CR1 1132 aa5.63□□□□□ -1.51
SMC5-202ENST00000471372 FIP1L1Q6UN15 594 aaKnown RBP5.63□□□□□ -1.51
SMC5-202ENST00000471372 TAS2R42Q7RTR8 314 aa5.63□□□□□ -1.51
SMC5-202ENST00000471372 CTAGE6Q86UF2 777 aa5.63□□□□□ -1.51
SMC5-202ENST00000471372 ZNF683Q8IZ20 524 aa5.63□□□□□ -1.51
SMC5-202ENST00000471372 SCARB1Q8WTV0 552 aa5.63□□□□□ -1.51
SMC5-202ENST00000471372 SLCO2A1Q92959 643 aa5.63□□□□□ -1.51
SMC5-202ENST00000471372 ANKRD27Q96NW4 1050 aa5.63□□□□□ -1.51
SMC5-202ENST00000471372 ALKBH3Q96Q83 286 aaPredicted RBP5.63□□□□□ -1.51
SMC5-202ENST00000471372 ZNF300Q96RE9 604 aaPredicted RBP5.63□□□□□ -1.51
SMC5-202ENST00000471372 CRNKL1Q9BZJ0 848 aaKnown RBP5.63□□□□□ -1.51
SMC5-202ENST00000471372 Q9HAA7 133 aa5.63□□□□□ -1.51
SMC5-202ENST00000471372 UTP6Q9NYH9 597 aaKnown RBP5.63□□□□□ -1.51
SMC5-202ENST00000471372 KLRF1Q9NZS2 232 aa5.63□□□□□ -1.51
SMC5-202ENST00000471372 C6orf203Q9P0P8 240 aaPredicted RBP5.63□□□□□ -1.51
SMC5-202ENST00000471372 EIF3KQ9UBQ5 218 aaKnown RBP5.63□□□□□ -1.51
SMC5-202ENST00000471372 EMCNQ9ULC0 261 aa5.63□□□□□ -1.51
SMC5-202ENST00000471372 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.63□□□□□ -1.51
SMC5-202ENST00000471372 SLC9A8Q9Y2E8 581 aa5.63□□□□□ -1.51
SMC5-202ENST00000471372 GSTK1Q9Y2Q3 226 aa5.63□□□□□ -1.51
SMC5-202ENST00000471372 NSD2O96028 1365 aa5.63□□□□□ -1.51
SMC5-202ENST00000471372 IGHV3-20A0A0C4DH32 117 aa5.62□□□□□ -1.51
SMC5-202ENST00000471372 ESYT2A0FGR8 921 aa5.62□□□□□ -1.51
SMC5-202ENST00000471372 LRIT2A6NDA9 550 aa5.62□□□□□ -1.51
SMC5-202ENST00000471372 METTL21EPA6NDL7 271 aa5.62□□□□□ -1.51
SMC5-202ENST00000471372 PRRG1O14668 218 aa5.62□□□□□ -1.51
SMC5-202ENST00000471372 ARPC3O15145 178 aa5.62□□□□□ -1.51
SMC5-202ENST00000471372 PCDH7O60245 1069 aa5.62□□□□□ -1.51
SMC5-202ENST00000471372 SERPINA3P01011 423 aa5.62□□□□□ -1.51
SMC5-202ENST00000471372 CD1DP15813 335 aa5.62□□□□□ -1.51
SMC5-202ENST00000471372 PSMA2P25787 234 aa5.62□□□□□ -1.51
SMC5-202ENST00000471372 DLX5P56178 289 aa5.62□□□□□ -1.51
SMC5-202ENST00000471372 GBE1Q04446 702 aa5.62□□□□□ -1.51
SMC5-202ENST00000471372 MLF2Q15773 248 aaPredicted RBP5.62□□□□□ -1.51
SMC5-202ENST00000471372 CHI3L2Q15782 390 aa5.62□□□□□ -1.51
SMC5-202ENST00000471372 WDR25Q64LD2 544 aaPredicted RBP5.62□□□□□ -1.51
SMC5-202ENST00000471372 ATRAIDQ6UW56 229 aa5.62□□□□□ -1.51
SMC5-202ENST00000471372 TMEM184AQ6ZMB5 413 aa5.62□□□□□ -1.51
SMC5-202ENST00000471372 EFL1Q7Z2Z2 1120 aaKnown RBP5.62□□□□□ -1.51
SMC5-202ENST00000471372 KIAA1328Q86T90 577 aa5.62□□□□□ -1.51
SMC5-202ENST00000471372 KCNMB4Q86W47 210 aa5.62□□□□□ -1.51
SMC5-202ENST00000471372 NT5C3BQ969T7 300 aa5.62□□□□□ -1.51
SMC5-202ENST00000471372 ELMO2Q96JJ3 720 aa5.62□□□□□ -1.51
SMC5-202ENST00000471372 NPAS2Q99743 824 aa5.62□□□□□ -1.51
SMC5-202ENST00000471372 TAS2R16Q9NYV7 291 aa5.62□□□□□ -1.51
SMC5-202ENST00000471372 RNF6Q9Y252 685 aa5.62□□□□□ -1.51
SMC5-202ENST00000471372 BMPR1BO00238 502 aa5.61□□□□□ -1.51
SMC5-202ENST00000471372 CASKO14936 926 aa5.61□□□□□ -1.51
SMC5-202ENST00000471372 INSIG1O15503 277 aa5.61□□□□□ -1.51
SMC5-202ENST00000471372 ADORA3P0DMS8 318 aa5.61□□□□□ -1.51
SMC5-202ENST00000471372 SNHG28P0DPA3 235 aa5.61□□□□□ -1.51
SMC5-202ENST00000471372 ANXA3P12429 323 aa5.61□□□□□ -1.51
SMC5-202ENST00000471372 ZNF44P15621 663 aa5.61□□□□□ -1.51
SMC5-202ENST00000471372 AOC1P19801 751 aa5.61□□□□□ -1.51
SMC5-202ENST00000471372 FCGR2CP31995 323 aa5.61□□□□□ -1.51
SMC5-202ENST00000471372 RPL9P32969 192 aaKnown RBP5.61□□□□□ -1.51
SMC5-202ENST00000471372 MMP12P39900 470 aa5.61□□□□□ -1.51
SMC5-202ENST00000471372 MAGEA5P43359 124 aa5.61□□□□□ -1.51
SMC5-202ENST00000471372 BRCC3P46736 316 aa5.61□□□□□ -1.51
SMC5-202ENST00000471372 ACTR3P61158 418 aa5.61□□□□□ -1.51
SMC5-202ENST00000471372 HAND2P61296 217 aa5.61□□□□□ -1.51
SMC5-202ENST00000471372 PHEXP78562 749 aa5.61□□□□□ -1.51
SMC5-202ENST00000471372 FAM76BQ5HYJ3 339 aa5.61□□□□□ -1.51
SMC5-202ENST00000471372 C10orf120Q5SQS8 335 aa5.61□□□□□ -1.51
SMC5-202ENST00000471372 STPG1Q5TH74 334 aa5.61□□□□□ -1.51
SMC5-202ENST00000471372 BHLHB9Q6PI77 547 aa5.61□□□□□ -1.51
SMC5-202ENST00000471372 HACD2Q6Y1H2 254 aa5.61□□□□□ -1.51
SMC5-202ENST00000471372 VSTM4Q8IW00 320 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms