RNA–Protein interactions for RNA: ENST00000464148.2

MRPL55-224, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-224ENST00000464148 CNTFP26441 200 aa12.04□□□□□ -0.48
MRPL55-224ENST00000464148 BSGP35613 385 aa12.04□□□□□ -0.48
MRPL55-224ENST00000464148 PCYT1AP49585 367 aa12.04□□□□□ -0.48
MRPL55-224ENST00000464148 LHX2P50458 406 aa12.04□□□□□ -0.48
MRPL55-224ENST00000464148 XKP51811 444 aa12.04□□□□□ -0.48
MRPL55-224ENST00000464148 GFRA1P56159 465 aa12.04□□□□□ -0.48
MRPL55-224ENST00000464148 DMTNQ08495 405 aa12.04□□□□□ -0.48
MRPL55-224ENST00000464148 PLCXD2Q0VAA5 305 aa12.04□□□□□ -0.48
MRPL55-224ENST00000464148 PDIA2Q13087 525 aaKnown RBP12.04□□□□□ -0.48
MRPL55-224ENST00000464148 BEND6Q5SZJ8 279 aaPredicted RBP12.04□□□□□ -0.48
MRPL55-224ENST00000464148 MRM1Q6IN84 353 aaKnown RBP12.04□□□□□ -0.48
MRPL55-224ENST00000464148 TMEM81Q6P7N7 255 aa12.04□□□□□ -0.48
MRPL55-224ENST00000464148 MEIOBQ8N635 442 aa12.04□□□□□ -0.48
MRPL55-224ENST00000464148 OR4K14Q8NGD5 310 aa12.04□□□□□ -0.48
MRPL55-224ENST00000464148 AENQ8WTP8 325 aaKnown RBP12.04□□□□□ -0.48
MRPL55-224ENST00000464148 HGDQ93099 445 aa12.04□□□□□ -0.48
MRPL55-224ENST00000464148 CTHRC1Q96CG8 243 aa12.04□□□□□ -0.48
MRPL55-224ENST00000464148 OMA1Q96E52 524 aa12.04□□□□□ -0.48
MRPL55-224ENST00000464148 DTNBP1Q96EV8 351 aa12.04□□□□□ -0.48
MRPL55-224ENST00000464148 OPN3Q9H1Y3 402 aaPredicted RBP12.04□□□□□ -0.48
MRPL55-224ENST00000464148 CXorf56Q9H5V9 222 aa12.04□□□□□ -0.48
MRPL55-224ENST00000464148 ALG9Q9H6U8 611 aa12.04□□□□□ -0.48
MRPL55-224ENST00000464148 DDX31Q9H8H2 851 aaKnown RBP12.04□□□□□ -0.48
MRPL55-224ENST00000464148 ELOVL5Q9NYP7 299 aa12.04□□□□□ -0.48
MRPL55-224ENST00000464148 NUDT4Q9NZJ9 180 aa12.04□□□□□ -0.48
MRPL55-224ENST00000464148 EHD3Q9NZN3 535 aa12.04□□□□□ -0.48
MRPL55-224ENST00000464148 BCAP29Q9UHQ4 241 aa12.04□□□□□ -0.48
MRPL55-224ENST00000464148 DTX4Q9Y2E6 619 aa12.04□□□□□ -0.48
MRPL55-224ENST00000464148 ANGPTL3Q9Y5C1 460 aa12.04□□□□□ -0.48
MRPL55-224ENST00000464148 PCDHGA11Q9Y5H2 935 aa12.04□□□□□ -0.48
MRPL55-224ENST00000464148 NBEAL1Q6ZS30 2694 aa12.04□□□□□ -0.48
MRPL55-224ENST00000464148 PRAMEF25A6NGN4 478 aa12.03□□□□□ -0.48
MRPL55-224ENST00000464148 SLC22A20A6NK97 555 aa12.03□□□□□ -0.48
MRPL55-224ENST00000464148 IFNA2P01563 188 aa12.03□□□□□ -0.48
MRPL55-224ENST00000464148 ZNF708P17019 499 aa12.03□□□□□ -0.48
MRPL55-224ENST00000464148 TCEA1P23193 301 aaKnown RBP12.03□□□□□ -0.48
MRPL55-224ENST00000464148 IVDP26440 423 aa12.03□□□□□ -0.48
MRPL55-224ENST00000464148 PTGDSP41222 190 aa12.03□□□□□ -0.48
MRPL55-224ENST00000464148 NR1H2P55055 460 aa12.03□□□□□ -0.48
MRPL55-224ENST00000464148 ATP5J2P56134 94 aa12.03□□□□□ -0.48
MRPL55-224ENST00000464148 CLDN18P56856 261 aa12.03□□□□□ -0.48
MRPL55-224ENST00000464148 SIRPAP78324 504 aa12.03□□□□□ -0.48
MRPL55-224ENST00000464148 EMBQ6PCB8 327 aa12.03□□□□□ -0.48
MRPL55-224ENST00000464148 PODNL1Q6PEZ8 512 aa12.03□□□□□ -0.48
MRPL55-224ENST00000464148 ZNF474Q6S9Z5 364 aaPredicted RBP12.03□□□□□ -0.48
MRPL55-224ENST00000464148 BTLAQ7Z6A9 289 aa12.03□□□□□ -0.48
MRPL55-224ENST00000464148 NUDT13Q86X67 352 aa12.03□□□□□ -0.48
MRPL55-224ENST00000464148 PLCZ1Q86YW0 608 aa12.03□□□□□ -0.48
MRPL55-224ENST00000464148 PHC2Q8IXK0 858 aa12.03□□□□□ -0.48
MRPL55-224ENST00000464148 TEX9Q8N6V9 391 aa12.03□□□□□ -0.48
MRPL55-224ENST00000464148 WDSUB1Q8N9V3 476 aa12.03□□□□□ -0.48
MRPL55-224ENST00000464148 STAG3L4Q8TBR4 150 aa12.03□□□□□ -0.48
MRPL55-224ENST00000464148 REPS1Q96D71 796 aa12.03□□□□□ -0.48
MRPL55-224ENST00000464148 LCORQ96JN0 433 aaPredicted RBP12.03□□□□□ -0.48
MRPL55-224ENST00000464148 MCMBPQ9BTE3 642 aa12.03□□□□□ -0.48
MRPL55-224ENST00000464148 ZNF717Q9BY31 904 aaPredicted RBP12.03□□□□□ -0.48
MRPL55-224ENST00000464148 BRINP2Q9C0B6 783 aa12.03□□□□□ -0.48
MRPL55-224ENST00000464148 DKKL1Q9UK85 242 aa12.03□□□□□ -0.48
MRPL55-224ENST00000464148 CFL2Q9Y281 166 aa12.03□□□□□ -0.48
MRPL55-224ENST00000464148 RAI1Q7Z5J4 1906 aaPredicted RBP12.02□□□□□ -0.49
MRPL55-224ENST00000464148 UBXN8O00124 270 aa12.02□□□□□ -0.49
MRPL55-224ENST00000464148 HCRTR2O43614 444 aa12.02□□□□□ -0.49
MRPL55-224ENST00000464148 UGT2B11O75310 529 aa12.02□□□□□ -0.49
MRPL55-224ENST00000464148 TP53P04637 393 aaPredicted RBP12.02□□□□□ -0.49
MRPL55-224ENST00000464148 CPMP14384 443 aa12.02□□□□□ -0.49
MRPL55-224ENST00000464148 PORP16435 677 aaPredicted RBP12.02□□□□□ -0.49
MRPL55-224ENST00000464148 SRD5A2P31213 254 aa12.02□□□□□ -0.49
MRPL55-224ENST00000464148 CCKARP32238 428 aa12.02□□□□□ -0.49
MRPL55-224ENST00000464148 TNK1Q13470 666 aa12.02□□□□□ -0.49
MRPL55-224ENST00000464148 CUL3Q13618 768 aa12.02□□□□□ -0.49
MRPL55-224ENST00000464148 FASTKD3Q14CZ7 662 aaKnown RBP12.02□□□□□ -0.49
MRPL55-224ENST00000464148 ANKRD34AQ69YU3 496 aa12.02□□□□□ -0.49
MRPL55-224ENST00000464148 MTERF4Q7Z6M4 381 aaKnown RBP12.02□□□□□ -0.49
MRPL55-224ENST00000464148 UBQLNLQ8IYU4 475 aa12.02□□□□□ -0.49
MRPL55-224ENST00000464148 MAPK1IP1LQ8NDC0 245 aa12.02□□□□□ -0.49
MRPL55-224ENST00000464148 ADCY4Q8NFM4 1077 aa12.02□□□□□ -0.49
MRPL55-224ENST00000464148 CAVIN3Q969G5 261 aa12.02□□□□□ -0.49
MRPL55-224ENST00000464148 ZNF845Q96IR2 970 aaPredicted RBP12.02□□□□□ -0.49
MRPL55-224ENST00000464148 MARK4Q96L34 752 aa12.02□□□□□ -0.49
MRPL55-224ENST00000464148 UBXN10Q96LJ8 280 aa12.02□□□□□ -0.49
MRPL55-224ENST00000464148 ITPAQ9BY32 194 aa12.02□□□□□ -0.49
MRPL55-224ENST00000464148 KLHL4Q9C0H6 718 aa12.02□□□□□ -0.49
MRPL55-224ENST00000464148 ZNF446Q9NWS9 450 aa12.02□□□□□ -0.49
MRPL55-224ENST00000464148 WHRNQ9P202 907 aa12.02□□□□□ -0.49
MRPL55-224ENST00000464148 TSC22D4Q9Y3Q8 395 aa12.02□□□□□ -0.49
MRPL55-224ENST00000464148 CUBNO60494 3623 aa12.01□□□□□ -0.49
MRPL55-224ENST00000464148 ESYT3A0FGR9 886 aa12.01□□□□□ -0.49
MRPL55-224ENST00000464148 RNF223E7ERA6 249 aa12.01□□□□□ -0.49
MRPL55-224ENST00000464148 ACOX3O15254 700 aa12.01□□□□□ -0.49
MRPL55-224ENST00000464148 C8BP07358 591 aa12.01□□□□□ -0.49
MRPL55-224ENST00000464148 PAX1P15863 534 aa12.01□□□□□ -0.49
MRPL55-224ENST00000464148 S1PR1P21453 382 aa12.01□□□□□ -0.49
MRPL55-224ENST00000464148 LOXP28300 417 aaPredicted RBP12.01□□□□□ -0.49
MRPL55-224ENST00000464148 ECHS1P30084 290 aa12.01□□□□□ -0.49
MRPL55-224ENST00000464148 KIR2DL2P43627 348 aaPredicted RBP12.01□□□□□ -0.49
MRPL55-224ENST00000464148 RAB10P61026 200 aa12.01□□□□□ -0.49
MRPL55-224ENST00000464148 HMGCS1Q01581 520 aa12.01□□□□□ -0.49
MRPL55-224ENST00000464148 KRTAP1-1Q07627 177 aa12.01□□□□□ -0.49
MRPL55-224ENST00000464148 EXOSC7Q15024 291 aaKnown RBP12.01□□□□□ -0.49
MRPL55-224ENST00000464148 TRADDQ15628 312 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms