RNA–Protein interactions for RNA: ENST00000461219.5

SCAF8-204, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 5

Gene SCAF8, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-204ENST00000461219 SIMC1Q8NDZ2 872 aa18.85■□□□□ 0.61
SCAF8-204ENST00000461219 OR7G2Q8NG99 324 aa18.85■□□□□ 0.61
SCAF8-204ENST00000461219 FCRL1Q96LA6 429 aa18.85■□□□□ 0.61
SCAF8-204ENST00000461219 GLIPR2Q9H4G4 154 aa18.85■□□□□ 0.61
SCAF8-204ENST00000461219 FOLH1BQ9HBA9 442 aa18.85■□□□□ 0.61
SCAF8-204ENST00000461219 TMBIM4Q9HC24 238 aa18.85■□□□□ 0.61
SCAF8-204ENST00000461219 TINAGQ9UJW2 476 aa18.85■□□□□ 0.61
SCAF8-204ENST00000461219 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.85■□□□□ 0.61
SCAF8-204ENST00000461219 ICE1Q9Y2F5 2266 aa18.85■□□□□ 0.61
SCAF8-204ENST00000461219 SPTBN1Q01082 2364 aaKnown RBP18.84■□□□□ 0.61
SCAF8-204ENST00000461219 DHRS4L1P0CG22 281 aa18.84■□□□□ 0.61
SCAF8-204ENST00000461219 PRPS2P11908 318 aa18.84■□□□□ 0.61
SCAF8-204ENST00000461219 NAGAP17050 411 aa18.84■□□□□ 0.61
SCAF8-204ENST00000461219 MAGEA5P43359 124 aa18.84■□□□□ 0.61
SCAF8-204ENST00000461219 PSPHP78330 225 aa18.84■□□□□ 0.61
SCAF8-204ENST00000461219 DUSP8Q13202 625 aa18.84■□□□□ 0.61
SCAF8-204ENST00000461219 SLC10A1Q14973 349 aa18.84■□□□□ 0.61
SCAF8-204ENST00000461219 TOMM20Q15388 145 aa18.84■□□□□ 0.61
SCAF8-204ENST00000461219 CMPK2Q5EBM0 449 aa18.84■□□□□ 0.61
SCAF8-204ENST00000461219 XKR7Q5GH72 579 aa18.84■□□□□ 0.61
SCAF8-204ENST00000461219 SLC44A2Q8IWA5 706 aaPredicted RBP18.84■□□□□ 0.61
SCAF8-204ENST00000461219 TMEM251Q8N6I4 163 aa18.84■□□□□ 0.61
SCAF8-204ENST00000461219 OR6Y1Q8NGX8 325 aa18.84■□□□□ 0.61
SCAF8-204ENST00000461219 SPPL2AQ8TCT8 520 aa18.84■□□□□ 0.61
SCAF8-204ENST00000461219 RELTQ969Z4 430 aa18.84■□□□□ 0.61
SCAF8-204ENST00000461219 CIDECQ96AQ7 238 aaPredicted RBP18.84■□□□□ 0.61
SCAF8-204ENST00000461219 RILPQ96NA2 401 aa18.84■□□□□ 0.61
SCAF8-204ENST00000461219 AMDHD1Q96NU7 426 aa18.84■□□□□ 0.61
SCAF8-204ENST00000461219 SECISBP2Q96T21 854 aaKnown RBP18.84■□□□□ 0.61
SCAF8-204ENST00000461219 PRPF18Q99633 342 aaKnown RBP18.84■□□□□ 0.61
SCAF8-204ENST00000461219 ZFP64Q9NPA5 681 aa18.84■□□□□ 0.61
SCAF8-204ENST00000461219 KLRF1Q9NZS2 232 aa18.84■□□□□ 0.61
SCAF8-204ENST00000461219 PTPN13Q12923 2485 aa18.84■□□□□ 0.61
SCAF8-204ENST00000461219 COL12A1Q99715 3063 aa18.84■□□□□ 0.61
SCAF8-204ENST00000461219 USP9XQ93008 2570 aaPredicted RBP18.84■□□□□ 0.61
SCAF8-204ENST00000461219 A0A087WV62 115 aa18.83■□□□□ 0.6
SCAF8-204ENST00000461219 ZG16O60844 167 aa18.83■□□□□ 0.6
SCAF8-204ENST00000461219 SNX4O95219 450 aa18.83■□□□□ 0.6
SCAF8-204ENST00000461219 ABCB1P08183 1280 aaPredicted RBP18.83■□□□□ 0.6
SCAF8-204ENST00000461219 GDF1P27539 372 aa18.83■□□□□ 0.6
SCAF8-204ENST00000461219 MPP2Q14168 576 aa18.83■□□□□ 0.6
SCAF8-204ENST00000461219 C6orf136Q5SQH8 315 aa18.83■□□□□ 0.6
SCAF8-204ENST00000461219 IL23RQ5VWK5 629 aa18.83■□□□□ 0.6
SCAF8-204ENST00000461219 ATG16L1Q676U5 607 aa18.83■□□□□ 0.6
SCAF8-204ENST00000461219 NUP54Q7Z3B4 507 aa18.83■□□□□ 0.6
SCAF8-204ENST00000461219 TRIM42Q8IWZ5 723 aa18.83■□□□□ 0.6
SCAF8-204ENST00000461219 TMBIM1Q969X1 311 aa18.83■□□□□ 0.6
SCAF8-204ENST00000461219 TMCO6Q96DC7 493 aa18.83■□□□□ 0.6
SCAF8-204ENST00000461219 MTERF3Q96E29 417 aa18.83■□□□□ 0.6
SCAF8-204ENST00000461219 C3orf30Q96M34 536 aa18.83■□□□□ 0.6
SCAF8-204ENST00000461219 ZNF395Q9H8N7 513 aaPredicted RBP18.83■□□□□ 0.6
SCAF8-204ENST00000461219 SH2D2AQ9NP31 389 aa18.83■□□□□ 0.6
SCAF8-204ENST00000461219 ATAD3AQ9NVI7 634 aa18.83■□□□□ 0.6
SCAF8-204ENST00000461219 CNOT11Q9UKZ1 510 aaKnown RBP18.83■□□□□ 0.6
SCAF8-204ENST00000461219 EXO1Q9UQ84 846 aaKnown RBP18.83■□□□□ 0.6
SCAF8-204ENST00000461219 GPR55Q9Y2T6 319 aaPredicted RBP18.83■□□□□ 0.6
SCAF8-204ENST00000461219 ZNHIT1O43257 154 aa18.82■□□□□ 0.6
SCAF8-204ENST00000461219 GLSO94925 669 aaPredicted RBP18.82■□□□□ 0.6
SCAF8-204ENST00000461219 GP1BBP13224 206 aa18.82■□□□□ 0.6
SCAF8-204ENST00000461219 MAN2A2P49641 1150 aa18.82■□□□□ 0.6
SCAF8-204ENST00000461219 CORO7P57737 925 aa18.82■□□□□ 0.6
SCAF8-204ENST00000461219 MRPS22P82650 360 aaKnown RBP18.82■□□□□ 0.6
SCAF8-204ENST00000461219 PRSS53Q2L4Q9 553 aa18.82■□□□□ 0.6
SCAF8-204ENST00000461219 ZNF551Q7Z340 670 aaPredicted RBP18.82■□□□□ 0.6
SCAF8-204ENST00000461219 CD163Q86VB7 1156 aa18.82■□□□□ 0.6
SCAF8-204ENST00000461219 ELP4Q96EB1 424 aa18.82■□□□□ 0.6
SCAF8-204ENST00000461219 COL21A1Q96P44 957 aa18.82■□□□□ 0.6
SCAF8-204ENST00000461219 PSMG3-AS1Q96PY0 264 aa18.82■□□□□ 0.6
SCAF8-204ENST00000461219 BTBD9Q96Q07 612 aa18.82■□□□□ 0.6
SCAF8-204ENST00000461219 C3orf14Q9HBI5 128 aa18.82■□□□□ 0.6
SCAF8-204ENST00000461219 EQTNQ9NQ60 294 aa18.82■□□□□ 0.6
SCAF8-204ENST00000461219 NOP53Q9NZM5 478 aaKnown RBP18.82■□□□□ 0.6
SCAF8-204ENST00000461219 PLEKHB1Q9UF11 243 aaPredicted RBP18.82■□□□□ 0.6
SCAF8-204ENST00000461219 MRTO4Q9UKD2 239 aaKnown RBP18.82■□□□□ 0.6
SCAF8-204ENST00000461219 C19orf53Q9UNZ5 99 aaPredicted RBP18.82■□□□□ 0.6
SCAF8-204ENST00000461219 ZNF835Q9Y2P0 537 aa18.82■□□□□ 0.6
SCAF8-204ENST00000461219 NUP214P35658 2090 aaPredicted RBP18.81■□□□□ 0.6
SCAF8-204ENST00000461219 ANKRD33BA6NCL7 494 aa18.81■□□□□ 0.6
SCAF8-204ENST00000461219 PLOD2O00469 737 aa18.81■□□□□ 0.6
SCAF8-204ENST00000461219 SCAMP2O15127 329 aaKnown RBP18.81■□□□□ 0.6
SCAF8-204ENST00000461219 ABCB7O75027 752 aa18.81■□□□□ 0.6
SCAF8-204ENST00000461219 NME6O75414 186 aaPredicted RBP18.81■□□□□ 0.6
SCAF8-204ENST00000461219 TRAPPC6AO75865 159 aa18.81■□□□□ 0.6
SCAF8-204ENST00000461219 RNF224P0DH78 156 aa18.81■□□□□ 0.6
SCAF8-204ENST00000461219 SMSP52788 366 aa18.81■□□□□ 0.6
SCAF8-204ENST00000461219 PRKAG1P54619 331 aa18.81■□□□□ 0.6
SCAF8-204ENST00000461219 BST1Q10588 318 aa18.81■□□□□ 0.6
SCAF8-204ENST00000461219 CPTPQ5TA50 214 aa18.81■□□□□ 0.6
SCAF8-204ENST00000461219 BICRALQ6AI39 1079 aa18.81■□□□□ 0.6
SCAF8-204ENST00000461219 Q6ZPB1 254 aaPredicted RBP18.81■□□□□ 0.6
SCAF8-204ENST00000461219 LARP4Q71RC2 724 aaKnown RBP eCLIP18.81■□□□□ 0.6
SCAF8-204ENST00000461219 FAM57AQ8TBR7 257 aa18.81■□□□□ 0.6
SCAF8-204ENST00000461219 ZNF764Q96H86 408 aaPredicted RBP18.81■□□□□ 0.6
SCAF8-204ENST00000461219 OSBPL11Q9BXB4 747 aa18.81■□□□□ 0.6
SCAF8-204ENST00000461219 ZDHHC11Q9H8X9 412 aa18.81■□□□□ 0.6
SCAF8-204ENST00000461219 Q9N2J8 555 aa18.81■□□□□ 0.6
SCAF8-204ENST00000461219 ASH1LQ9NR48 2969 aaKnown RBP18.8■□□□□ 0.6
SCAF8-204ENST00000461219 TRGV5A0A0B4J1U4 118 aa18.8■□□□□ 0.6
SCAF8-204ENST00000461219 NPIPA2E9PIF3 369 aa18.8■□□□□ 0.6
SCAF8-204ENST00000461219 NPIPA3F8WFD2 350 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms