RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 B4GALT7Q9UBV7 327 aa16.62■□□□□ 0.25
PDLIM2-215ENST00000456545 GIMAP2Q9UG22 337 aa16.62■□□□□ 0.25
PDLIM2-215ENST00000456545 TINAGQ9UJW2 476 aa16.62■□□□□ 0.25
PDLIM2-215ENST00000456545 CNOT11Q9UKZ1 510 aaKnown RBP16.62■□□□□ 0.25
PDLIM2-215ENST00000456545 EXO1Q9UQ84 846 aaKnown RBP16.62■□□□□ 0.25
PDLIM2-215ENST00000456545 GPR55Q9Y2T6 319 aaPredicted RBP16.62■□□□□ 0.25
PDLIM2-215ENST00000456545 A0A087WV62 115 aa16.61■□□□□ 0.25
PDLIM2-215ENST00000456545 FRG2CA6NGY1 282 aa16.61■□□□□ 0.25
PDLIM2-215ENST00000456545 ZG16O60844 167 aa16.61■□□□□ 0.25
PDLIM2-215ENST00000456545 SNX4O95219 450 aa16.61■□□□□ 0.25
PDLIM2-215ENST00000456545 TPOP07202 933 aa16.61■□□□□ 0.25
PDLIM2-215ENST00000456545 ABCB1P08183 1280 aaPredicted RBP16.61■□□□□ 0.25
PDLIM2-215ENST00000456545 MAGEA5P43359 124 aa16.61■□□□□ 0.25
PDLIM2-215ENST00000456545 HSPB3Q12988 150 aa16.61■□□□□ 0.25
PDLIM2-215ENST00000456545 ZNHIT3Q15649 155 aaPredicted RBP16.61■□□□□ 0.25
PDLIM2-215ENST00000456545 XKR7Q5GH72 579 aa16.61■□□□□ 0.25
PDLIM2-215ENST00000456545 C6orf136Q5SQH8 315 aa16.61■□□□□ 0.25
PDLIM2-215ENST00000456545 IL23RQ5VWK5 629 aa16.61■□□□□ 0.25
PDLIM2-215ENST00000456545 SLC44A2Q8IWA5 706 aaPredicted RBP16.61■□□□□ 0.25
PDLIM2-215ENST00000456545 SLC34A3Q8N130 599 aa16.61■□□□□ 0.25
PDLIM2-215ENST00000456545 TMCO6Q96DC7 493 aa16.61■□□□□ 0.25
PDLIM2-215ENST00000456545 MTERF3Q96E29 417 aa16.61■□□□□ 0.25
PDLIM2-215ENST00000456545 ZBED6CLQ96FA7 236 aaPredicted RBP16.61■□□□□ 0.25
PDLIM2-215ENST00000456545 ZNF597Q96LX8 424 aa16.61■□□□□ 0.25
PDLIM2-215ENST00000456545 PRPF18Q99633 342 aaKnown RBP16.61■□□□□ 0.25
PDLIM2-215ENST00000456545 ZNF835Q9Y2P0 537 aa16.61■□□□□ 0.25
PDLIM2-215ENST00000456545 SPENQ96T58 3664 aaKnown RBP16.61■□□□□ 0.25
PDLIM2-215ENST00000456545 DOPEY2Q9Y3R5 2298 aa16.6■□□□□ 0.25
PDLIM2-215ENST00000456545 ANKRD33BA6NCL7 494 aa16.6■□□□□ 0.25
PDLIM2-215ENST00000456545 WIPF3A6NGB9 483 aa16.6■□□□□ 0.25
PDLIM2-215ENST00000456545 PLOD2O00469 737 aa16.6■□□□□ 0.25
PDLIM2-215ENST00000456545 NME6O75414 186 aaPredicted RBP16.6■□□□□ 0.25
PDLIM2-215ENST00000456545 GLSO94925 669 aaPredicted RBP16.6■□□□□ 0.25
PDLIM2-215ENST00000456545 RNF224P0DH78 156 aa16.6■□□□□ 0.25
PDLIM2-215ENST00000456545 GP1BBP13224 206 aa16.6■□□□□ 0.25
PDLIM2-215ENST00000456545 IL12BP29460 328 aa16.6■□□□□ 0.25
PDLIM2-215ENST00000456545 SOX18P35713 384 aa16.6■□□□□ 0.25
PDLIM2-215ENST00000456545 PSPHP78330 225 aa16.6■□□□□ 0.25
PDLIM2-215ENST00000456545 FOXO1Q12778 655 aa16.6■□□□□ 0.25
PDLIM2-215ENST00000456545 TOMM20Q15388 145 aa16.6■□□□□ 0.25
PDLIM2-215ENST00000456545 ATG16L1Q676U5 607 aa16.6■□□□□ 0.25
PDLIM2-215ENST00000456545 Q6ZPB1 254 aaPredicted RBP16.6■□□□□ 0.25
PDLIM2-215ENST00000456545 ZNF551Q7Z340 670 aaPredicted RBP16.6■□□□□ 0.25
PDLIM2-215ENST00000456545 SZRD1Q7Z422 152 aa16.6■□□□□ 0.25
PDLIM2-215ENST00000456545 TRIM42Q8IWZ5 723 aa16.6■□□□□ 0.25
PDLIM2-215ENST00000456545 GOLGA6L1Q8N7Z2 621 aa16.6■□□□□ 0.25
PDLIM2-215ENST00000456545 TMBIM1Q969X1 311 aa16.6■□□□□ 0.25
PDLIM2-215ENST00000456545 CIDECQ96AQ7 238 aaPredicted RBP16.6■□□□□ 0.25
PDLIM2-215ENST00000456545 ELP4Q96EB1 424 aa16.6■□□□□ 0.25
PDLIM2-215ENST00000456545 RILPQ96NA2 401 aa16.6■□□□□ 0.25
PDLIM2-215ENST00000456545 KLRF1Q9NZS2 232 aa16.6■□□□□ 0.25
PDLIM2-215ENST00000456545 PLEKHB1Q9UF11 243 aaPredicted RBP16.6■□□□□ 0.25
PDLIM2-215ENST00000456545 C19orf53Q9UNZ5 99 aaPredicted RBP16.6■□□□□ 0.25
PDLIM2-215ENST00000456545 NINQ8N4C6 2090 aa16.6■□□□□ 0.25
PDLIM2-215ENST00000456545 TO15178 435 aa16.59■□□□□ 0.25
PDLIM2-215ENST00000456545 TBX19O60806 448 aa16.59■□□□□ 0.25
PDLIM2-215ENST00000456545 TRAPPC6AO75865 159 aa16.59■□□□□ 0.25
PDLIM2-215ENST00000456545 GDF1P27539 372 aa16.59■□□□□ 0.25
PDLIM2-215ENST00000456545 CASP3P42574 277 aa16.59■□□□□ 0.25
PDLIM2-215ENST00000456545 MAN2A2P49641 1150 aa16.59■□□□□ 0.25
PDLIM2-215ENST00000456545 PRKAG1P54619 331 aa16.59■□□□□ 0.25
PDLIM2-215ENST00000456545 CORO7P57737 925 aa16.59■□□□□ 0.25
PDLIM2-215ENST00000456545 MRPS22P82650 360 aaKnown RBP16.59■□□□□ 0.25
PDLIM2-215ENST00000456545 BST1Q10588 318 aa16.59■□□□□ 0.25
PDLIM2-215ENST00000456545 GTF3C1Q12789 2109 aa16.59■□□□□ 0.25
PDLIM2-215ENST00000456545 HYAL4Q2M3T9 481 aa16.59■□□□□ 0.25
PDLIM2-215ENST00000456545 CES4AQ5XG92 561 aa16.59■□□□□ 0.25
PDLIM2-215ENST00000456545 BICRALQ6AI39 1079 aa16.59■□□□□ 0.25
PDLIM2-215ENST00000456545 CEP70Q8NHQ1 597 aa16.59■□□□□ 0.25
PDLIM2-215ENST00000456545 FAM57AQ8TBR7 257 aa16.59■□□□□ 0.25
PDLIM2-215ENST00000456545 ZNF764Q96H86 408 aaPredicted RBP16.59■□□□□ 0.25
PDLIM2-215ENST00000456545 COL21A1Q96P44 957 aa16.59■□□□□ 0.25
PDLIM2-215ENST00000456545 BTBD9Q96Q07 612 aa16.59■□□□□ 0.25
PDLIM2-215ENST00000456545 ANGPTL4Q9BY76 406 aa16.59■□□□□ 0.25
PDLIM2-215ENST00000456545 C20orf27Q9GZN8 174 aa16.59■□□□□ 0.25
PDLIM2-215ENST00000456545 ZDHHC11Q9H8X9 412 aa16.59■□□□□ 0.25
PDLIM2-215ENST00000456545 C3orf14Q9HBI5 128 aa16.59■□□□□ 0.25
PDLIM2-215ENST00000456545 ATAD3AQ9NVI7 634 aa16.59■□□□□ 0.25
PDLIM2-215ENST00000456545 MYO7BQ6PIF6 2116 aa16.58■□□□□ 0.25
PDLIM2-215ENST00000456545 POLEQ07864 2286 aa16.58■□□□□ 0.25
PDLIM2-215ENST00000456545 TRGV5A0A0B4J1U4 118 aa16.58■□□□□ 0.24
PDLIM2-215ENST00000456545 NPIPA2E9PIF3 369 aa16.58■□□□□ 0.24
PDLIM2-215ENST00000456545 NPIPA3F8WFD2 350 aa16.58■□□□□ 0.24
PDLIM2-215ENST00000456545 UPK1AO00322 258 aa16.58■□□□□ 0.24
PDLIM2-215ENST00000456545 ABCB7O75027 752 aa16.58■□□□□ 0.24
PDLIM2-215ENST00000456545 CT45A8P0DMV1 189 aa16.58■□□□□ 0.24
PDLIM2-215ENST00000456545 CT45A9P0DMV2 189 aa16.58■□□□□ 0.24
PDLIM2-215ENST00000456545 SMSP52788 366 aa16.58■□□□□ 0.24
PDLIM2-215ENST00000456545 SLC18A1P54219 525 aa16.58■□□□□ 0.24
PDLIM2-215ENST00000456545 WDR4P57081 412 aaKnown RBP16.58■□□□□ 0.24
PDLIM2-215ENST00000456545 EMX2Q04743 252 aa16.58■□□□□ 0.24
PDLIM2-215ENST00000456545 EFR3AQ14156 821 aa16.58■□□□□ 0.24
PDLIM2-215ENST00000456545 ZNF385BQ569K4 471 aa16.58■□□□□ 0.24
PDLIM2-215ENST00000456545 CT45A2Q5DJT8 189 aa16.58■□□□□ 0.24
PDLIM2-215ENST00000456545 CPTPQ5TA50 214 aa16.58■□□□□ 0.24
PDLIM2-215ENST00000456545 AGBL2Q5U5Z8 902 aa16.58■□□□□ 0.24
PDLIM2-215ENST00000456545 SLC30A6Q6NXT4 461 aa16.58■□□□□ 0.24
PDLIM2-215ENST00000456545 LARP4Q71RC2 724 aaKnown RBP eCLIP16.58■□□□□ 0.242e-7■■■■■ 28.3
PDLIM2-215ENST00000456545 CD163Q86VB7 1156 aa16.58■□□□□ 0.24
PDLIM2-215ENST00000456545 DOLPP1Q86YN1 238 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms