RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 NMD3Q96D46 503 aaKnown RBP15.59■□□□□ 0.09
USHBP1-203ENST00000431146 PRR14Q9BWN1 585 aa15.59■□□□□ 0.09
USHBP1-203ENST00000431146 YTHDF1Q9BYJ9 559 aaKnown RBP15.59■□□□□ 0.09
USHBP1-203ENST00000431146 SPRTNQ9H040 489 aaPredicted RBP15.59■□□□□ 0.09
USHBP1-203ENST00000431146 EPB41L1Q9H4G0 881 aa15.59■□□□□ 0.09
USHBP1-203ENST00000431146 GIN1Q9NXP7 522 aa15.59■□□□□ 0.09
USHBP1-203ENST00000431146 TUBA8Q9NY65 449 aaPredicted RBP15.59■□□□□ 0.09
USHBP1-203ENST00000431146 TMEM9Q9P0T7 183 aa15.59■□□□□ 0.09
USHBP1-203ENST00000431146 NTMQ9P121 344 aa15.59■□□□□ 0.09
USHBP1-203ENST00000431146 NDRG4Q9ULP0 352 aaKnown RBP15.59■□□□□ 0.09
USHBP1-203ENST00000431146 ASNA1O43681 348 aa15.59■□□□□ 0.09
USHBP1-203ENST00000431146 ZBTB11O95625 1053 aaPredicted RBP15.59■□□□□ 0.09
USHBP1-203ENST00000431146 ATP1B1P05026 303 aa15.59■□□□□ 0.09
USHBP1-203ENST00000431146 ACP2P11117 423 aa15.59■□□□□ 0.09
USHBP1-203ENST00000431146 RYKP34925 604 aa15.59■□□□□ 0.09
USHBP1-203ENST00000431146 HMGA2P52926 109 aa15.59■□□□□ 0.09
USHBP1-203ENST00000431146 BNC1Q01954 994 aa15.59■□□□□ 0.09
USHBP1-203ENST00000431146 IL18R1Q13478 541 aa15.59■□□□□ 0.09
USHBP1-203ENST00000431146 KEAP1Q14145 624 aa15.59■□□□□ 0.09
USHBP1-203ENST00000431146 GNA13Q14344 377 aa15.59■□□□□ 0.09
USHBP1-203ENST00000431146 SEC23BQ15437 767 aa15.59■□□□□ 0.09
USHBP1-203ENST00000431146 NEDD8Q15843 81 aa15.59■□□□□ 0.09
USHBP1-203ENST00000431146 FAM214AQ32MH5 1076 aa15.59■□□□□ 0.09
USHBP1-203ENST00000431146 COLEC12Q5KU26 742 aa15.59■□□□□ 0.09
USHBP1-203ENST00000431146 RBM48Q5RL73 367 aaKnown RBP15.59■□□□□ 0.09
USHBP1-203ENST00000431146 FHL5Q5TD97 284 aa15.59■□□□□ 0.09
USHBP1-203ENST00000431146 CDC73Q6P1J9 531 aa15.59■□□□□ 0.09
USHBP1-203ENST00000431146 KCTD8Q6ZWB6 473 aa15.59■□□□□ 0.09
USHBP1-203ENST00000431146 LSRQ86X29 649 aaPredicted RBP15.59■□□□□ 0.09
USHBP1-203ENST00000431146 AQP11Q8NBQ7 271 aa15.59■□□□□ 0.09
USHBP1-203ENST00000431146 TANKQ92844 425 aa15.59■□□□□ 0.09
USHBP1-203ENST00000431146 BTBD2Q9BX70 525 aa15.59■□□□□ 0.09
USHBP1-203ENST00000431146 NPLQ9BXD5 320 aaPredicted RBP15.59■□□□□ 0.09
USHBP1-203ENST00000431146 CAPN10Q9HC96 672 aa15.59■□□□□ 0.09
USHBP1-203ENST00000431146 PTGFRNQ9P2B2 879 aa15.59■□□□□ 0.09
USHBP1-203ENST00000431146 HYKKA2RU49 373 aa15.58■□□□□ 0.08
USHBP1-203ENST00000431146 A8MVJ9 347 aa15.58■□□□□ 0.08
USHBP1-203ENST00000431146 PTGES3LE9PB15 166 aa15.58■□□□□ 0.08
USHBP1-203ENST00000431146 TGFBR3LH3BV60 316 aa15.58■□□□□ 0.08
USHBP1-203ENST00000431146 SLC1A7O00341 560 aa15.58■□□□□ 0.08
USHBP1-203ENST00000431146 GASTP01350 101 aa15.58■□□□□ 0.08
USHBP1-203ENST00000431146 GIMD1P0DJR0 217 aa15.58■□□□□ 0.08
USHBP1-203ENST00000431146 ANXA8P13928 327 aa15.58■□□□□ 0.08
USHBP1-203ENST00000431146 NAT1P18440 290 aa15.58■□□□□ 0.08
USHBP1-203ENST00000431146 CFHR1Q03591 330 aa15.58■□□□□ 0.08
USHBP1-203ENST00000431146 SLC13A2Q13183 592 aa15.58■□□□□ 0.08
USHBP1-203ENST00000431146 DYNC1I2Q13409 638 aaKnown RBP15.58■□□□□ 0.08
USHBP1-203ENST00000431146 SMN1Q16637 294 aaKnown RBP15.58■□□□□ 0.08
USHBP1-203ENST00000431146 PRICKLE4Q2TBC4 344 aa15.58■□□□□ 0.08
USHBP1-203ENST00000431146 ZNF311Q5JNZ3 666 aa15.58■□□□□ 0.08
USHBP1-203ENST00000431146 NLGN4XQ8N0W4 816 aa15.58■□□□□ 0.08
USHBP1-203ENST00000431146 DGCR14Q96DF8 476 aaKnown RBP15.58■□□□□ 0.08
USHBP1-203ENST00000431146 TRNT1Q96Q11 434 aaKnown RBP15.58■□□□□ 0.08
USHBP1-203ENST00000431146 GABARAPL3Q9BY60 117 aa15.58■□□□□ 0.08
USHBP1-203ENST00000431146 PDE7BQ9NP56 450 aa15.58■□□□□ 0.08
USHBP1-203ENST00000431146 PRDM9Q9NQV7 894 aa15.58■□□□□ 0.08
USHBP1-203ENST00000431146 PAK1IP1Q9NWT1 392 aaPredicted RBP15.58■□□□□ 0.08
USHBP1-203ENST00000431146 MAT2BQ9NZL9 334 aa15.58■□□□□ 0.08
USHBP1-203ENST00000431146 C19orf53Q9UNZ5 99 aaPredicted RBP15.58■□□□□ 0.08
USHBP1-203ENST00000431146 GPR55Q9Y2T6 319 aaPredicted RBP15.58■□□□□ 0.08
USHBP1-203ENST00000431146 TMEM184BQ9Y519 407 aaPredicted RBP15.58■□□□□ 0.08
USHBP1-203ENST00000431146 ZDBF2Q9HCK1 2354 aa15.58■□□□□ 0.08
USHBP1-203ENST00000431146 SEC16AO15027 2179 aa15.58■□□□□ 0.08
USHBP1-203ENST00000431146 IGHV1OR21-1A0A087WYE8 117 aa15.58■□□□□ 0.08
USHBP1-203ENST00000431146 LGI1O95970 557 aa15.58■□□□□ 0.08
USHBP1-203ENST00000431146 ALPPP05187 535 aa15.58■□□□□ 0.08
USHBP1-203ENST00000431146 MGAT2Q10469 447 aa15.58■□□□□ 0.08
USHBP1-203ENST00000431146 PMS2P3Q13401 168 aa15.58■□□□□ 0.08
USHBP1-203ENST00000431146 SHBQ15464 509 aa15.58■□□□□ 0.08
USHBP1-203ENST00000431146 GATAD2AQ86YP4 633 aa15.58■□□□□ 0.08
USHBP1-203ENST00000431146 SETD9Q8NE22 299 aa15.58■□□□□ 0.08
USHBP1-203ENST00000431146 PIK3R3Q92569 461 aa15.58■□□□□ 0.08
USHBP1-203ENST00000431146 MMABQ96EY8 250 aaPredicted RBP15.58■□□□□ 0.08
USHBP1-203ENST00000431146 SPATA5L1Q9BVQ7 753 aa15.58■□□□□ 0.08
USHBP1-203ENST00000431146 POLR1BQ9H9Y6 1135 aa15.58■□□□□ 0.08
USHBP1-203ENST00000431146 NDUFA13Q9P0J0 144 aa15.58■□□□□ 0.08
USHBP1-203ENST00000431146 A4GNTQ9UNA3 340 aa15.58■□□□□ 0.08
USHBP1-203ENST00000431146 PLCL2Q9UPR0 1127 aa15.58■□□□□ 0.08
USHBP1-203ENST00000431146 LIPT1Q9Y234 373 aa15.58■□□□□ 0.08
USHBP1-203ENST00000431146 HCN4Q9Y3Q4 1203 aa15.58■□□□□ 0.08
USHBP1-203ENST00000431146 PCDHGA6Q9Y5G7 932 aa15.58■□□□□ 0.08
USHBP1-203ENST00000431146 CEPT1Q9Y6K0 416 aa15.58■□□□□ 0.08
USHBP1-203ENST00000431146 CLDN24A6NM45 220 aa15.57■□□□□ 0.08
USHBP1-203ENST00000431146 A8MU76 341 aa15.57■□□□□ 0.08
USHBP1-203ENST00000431146 ATP6V1G1O75348 118 aa15.57■□□□□ 0.08
USHBP1-203ENST00000431146 ANGPTL1O95841 491 aa15.57■□□□□ 0.08
USHBP1-203ENST00000431146 H1F0P07305 194 aaKnown RBP15.57■□□□□ 0.08
USHBP1-203ENST00000431146 HTR1AP08908 422 aa15.57■□□□□ 0.08
USHBP1-203ENST00000431146 ELAVL4P26378 380 aaKnown RBP15.57■□□□□ 0.08
USHBP1-203ENST00000431146 GSTT1P30711 240 aa15.57■□□□□ 0.08
USHBP1-203ENST00000431146 CTSKP43235 329 aa15.57■□□□□ 0.08
USHBP1-203ENST00000431146 RNF144AP50876 292 aaPredicted RBP15.57■□□□□ 0.08
USHBP1-203ENST00000431146 BTG2P78543 158 aa15.57■□□□□ 0.08
USHBP1-203ENST00000431146 HPCAP84074 193 aa15.57■□□□□ 0.08
USHBP1-203ENST00000431146 LYSMD4Q5XG99 296 aa15.57■□□□□ 0.08
USHBP1-203ENST00000431146 HEPHL1Q6MZM0 1159 aa15.57■□□□□ 0.08
USHBP1-203ENST00000431146 FRRS1Q6ZNA5 592 aa15.57■□□□□ 0.08
USHBP1-203ENST00000431146 B3GNT8Q7Z7M8 397 aa15.57■□□□□ 0.08
USHBP1-203ENST00000431146 FBLIM1Q8WUP2 373 aa15.57■□□□□ 0.08
USHBP1-203ENST00000431146 RNF31Q96EP0 1072 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms