RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 ANGPTL8Q6UXH0 198 aa9.32□□□□□ -0.92
NCKIPSD-202ENST00000413374 NUP54Q7Z3B4 507 aa9.32□□□□□ -0.92
NCKIPSD-202ENST00000413374 YRDCQ86U90 279 aaKnown RBP9.32□□□□□ -0.92
NCKIPSD-202ENST00000413374 SLC44A2Q8IWA5 706 aaPredicted RBP9.32□□□□□ -0.92
NCKIPSD-202ENST00000413374 SAMD14Q8IZD0 417 aaPredicted RBP9.32□□□□□ -0.92
NCKIPSD-202ENST00000413374 CLYBLQ8N0X4 340 aa9.32□□□□□ -0.92
NCKIPSD-202ENST00000413374 SLC34A3Q8N130 599 aa9.32□□□□□ -0.92
NCKIPSD-202ENST00000413374 EID3Q8N140 333 aa9.32□□□□□ -0.92
NCKIPSD-202ENST00000413374 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.32□□□□□ -0.92
NCKIPSD-202ENST00000413374 PHF10Q8WUB8 498 aaKnown RBP9.32□□□□□ -0.92
NCKIPSD-202ENST00000413374 RND1Q92730 232 aa9.32□□□□□ -0.92
NCKIPSD-202ENST00000413374 HGDQ93099 445 aa9.32□□□□□ -0.92
NCKIPSD-202ENST00000413374 CIDECQ96AQ7 238 aaPredicted RBP9.32□□□□□ -0.92
NCKIPSD-202ENST00000413374 SARAFQ96BY9 339 aa9.32□□□□□ -0.92
NCKIPSD-202ENST00000413374 HSPBAP1Q96EW2 488 aa9.32□□□□□ -0.92
NCKIPSD-202ENST00000413374 PKNOX2Q96KN3 472 aa9.32□□□□□ -0.92
NCKIPSD-202ENST00000413374 ZNF597Q96LX8 424 aa9.32□□□□□ -0.92
NCKIPSD-202ENST00000413374 TSSK3Q96PN8 268 aa9.32□□□□□ -0.92
NCKIPSD-202ENST00000413374 ADOQ96SZ5 270 aa9.32□□□□□ -0.92
NCKIPSD-202ENST00000413374 ZNF703Q9H7S9 590 aaPredicted RBP9.32□□□□□ -0.92
NCKIPSD-202ENST00000413374 FOLH1BQ9HBA9 442 aa9.32□□□□□ -0.92
NCKIPSD-202ENST00000413374 MYNNQ9NPC7 610 aa9.32□□□□□ -0.92
NCKIPSD-202ENST00000413374 C1orf109Q9NX04 203 aa9.32□□□□□ -0.92
NCKIPSD-202ENST00000413374 MKS1Q9NXB0 559 aa9.32□□□□□ -0.92
NCKIPSD-202ENST00000413374 B4GALT7Q9UBV7 327 aa9.32□□□□□ -0.92
NCKIPSD-202ENST00000413374 MAPRE3Q9UPY8 281 aa9.32□□□□□ -0.92
NCKIPSD-202ENST00000413374 RNF6Q9Y252 685 aa9.32□□□□□ -0.92
NCKIPSD-202ENST00000413374 GPR55Q9Y2T6 319 aaPredicted RBP9.32□□□□□ -0.92
NCKIPSD-202ENST00000413374 DNAJC15Q9Y5T4 150 aa9.32□□□□□ -0.92
NCKIPSD-202ENST00000413374 ZGRF1Q86YA3 2104 aa9.32□□□□□ -0.92
NCKIPSD-202ENST00000413374 PTPN13Q12923 2485 aa9.31□□□□□ -0.92
NCKIPSD-202ENST00000413374 HIVEP3Q5T1R4 2406 aa9.31□□□□□ -0.92
NCKIPSD-202ENST00000413374 FRG2CA6NGY1 282 aa9.31□□□□□ -0.92
NCKIPSD-202ENST00000413374 RGS16O15492 202 aaPredicted RBP9.31□□□□□ -0.92
NCKIPSD-202ENST00000413374 CTIFO43310 598 aaKnown RBP9.31□□□□□ -0.92
NCKIPSD-202ENST00000413374 NPHS1O60500 1241 aa9.31□□□□□ -0.92
NCKIPSD-202ENST00000413374 HCN1O60741 890 aa9.31□□□□□ -0.92
NCKIPSD-202ENST00000413374 PEX11AO75192 247 aa9.31□□□□□ -0.92
NCKIPSD-202ENST00000413374 ERN1O75460 977 aaKnown RBP9.31□□□□□ -0.92
NCKIPSD-202ENST00000413374 BPGMP07738 259 aa9.31□□□□□ -0.92
NCKIPSD-202ENST00000413374 CT45A8P0DMV1 189 aa9.31□□□□□ -0.92
NCKIPSD-202ENST00000413374 CT45A9P0DMV2 189 aa9.31□□□□□ -0.92
NCKIPSD-202ENST00000413374 COX6B1P14854 86 aa9.31□□□□□ -0.92
NCKIPSD-202ENST00000413374 NAGAP17050 411 aa9.31□□□□□ -0.92
NCKIPSD-202ENST00000413374 EFNA1P20827 205 aaPredicted RBP9.31□□□□□ -0.92
NCKIPSD-202ENST00000413374 AGAP20933 346 aa9.31□□□□□ -0.92
NCKIPSD-202ENST00000413374 TCEA1P23193 301 aaKnown RBP9.31□□□□□ -0.92
NCKIPSD-202ENST00000413374 ACVR2AP27037 513 aa9.31□□□□□ -0.92
NCKIPSD-202ENST00000413374 ARRB2P32121 409 aa9.31□□□□□ -0.92
NCKIPSD-202ENST00000413374 KRT20P35900 424 aa9.31□□□□□ -0.92
NCKIPSD-202ENST00000413374 PTGDSP41222 190 aa9.31□□□□□ -0.92
NCKIPSD-202ENST00000413374 RFX3P48380 749 aa9.31□□□□□ -0.92
NCKIPSD-202ENST00000413374 PRKAG1P54619 331 aa9.31□□□□□ -0.92
NCKIPSD-202ENST00000413374 WNT3P56703 355 aa9.31□□□□□ -0.92
NCKIPSD-202ENST00000413374 DCAF7P61962 342 aa9.31□□□□□ -0.92
NCKIPSD-202ENST00000413374 ZNF844Q08AG5 666 aa9.31□□□□□ -0.92
NCKIPSD-202ENST00000413374 ZNF155Q12901 538 aaPredicted RBP9.31□□□□□ -0.92
NCKIPSD-202ENST00000413374 CEBPEQ15744 281 aa9.31□□□□□ -0.92
NCKIPSD-202ENST00000413374 UGT3A2Q3SY77 523 aa9.31□□□□□ -0.92
NCKIPSD-202ENST00000413374 CT45A2Q5DJT8 189 aa9.31□□□□□ -0.92
NCKIPSD-202ENST00000413374 TBCELQ5QJ74 424 aa9.31□□□□□ -0.92
NCKIPSD-202ENST00000413374 KANK2Q63ZY3 851 aa9.31□□□□□ -0.92
NCKIPSD-202ENST00000413374 RTL6Q6ICC9 239 aa9.31□□□□□ -0.92
NCKIPSD-202ENST00000413374 OR5M10Q6IEU7 315 aa9.31□□□□□ -0.92
NCKIPSD-202ENST00000413374 NPSR1Q6W5P4 371 aa9.31□□□□□ -0.92
NCKIPSD-202ENST00000413374 ZNF551Q7Z340 670 aaPredicted RBP9.31□□□□□ -0.92
NCKIPSD-202ENST00000413374 NUDCD3Q8IVD9 361 aa9.31□□□□□ -0.92
NCKIPSD-202ENST00000413374 MCEMP1Q8IX19 187 aa9.31□□□□□ -0.92
NCKIPSD-202ENST00000413374 C17orf47Q8NEP4 570 aa9.31□□□□□ -0.92
NCKIPSD-202ENST00000413374 OR1J4Q8NGS1 313 aa9.31□□□□□ -0.92
NCKIPSD-202ENST00000413374 PPP1R14CQ8TAE6 165 aa9.31□□□□□ -0.92
NCKIPSD-202ENST00000413374 NEIL3Q8TAT5 605 aa9.31□□□□□ -0.92
NCKIPSD-202ENST00000413374 FAM76AQ8TAV0 307 aa9.31□□□□□ -0.92
NCKIPSD-202ENST00000413374 ZNF675Q8TD23 568 aa9.31□□□□□ -0.92
NCKIPSD-202ENST00000413374 NUDT8Q8WV74 236 aa9.31□□□□□ -0.92
NCKIPSD-202ENST00000413374 TWIST2Q8WVJ9 160 aa9.31□□□□□ -0.92
NCKIPSD-202ENST00000413374 EFHD2Q96C19 240 aaPredicted RBP9.31□□□□□ -0.92
NCKIPSD-202ENST00000413374 PPP1R36Q96LQ0 422 aa9.31□□□□□ -0.92
NCKIPSD-202ENST00000413374 AMDHD1Q96NU7 426 aa9.31□□□□□ -0.92
NCKIPSD-202ENST00000413374 COL21A1Q96P44 957 aa9.31□□□□□ -0.92
NCKIPSD-202ENST00000413374 SECISBP2Q96T21 854 aaKnown RBP9.31□□□□□ -0.92
NCKIPSD-202ENST00000413374 TTYH2Q9BSA4 534 aa9.31□□□□□ -0.92
NCKIPSD-202ENST00000413374 TRMOQ9BU70 441 aa9.31□□□□□ -0.92
NCKIPSD-202ENST00000413374 ZNF395Q9H8N7 513 aaPredicted RBP9.31□□□□□ -0.92
NCKIPSD-202ENST00000413374 EML4Q9HC35 981 aaKnown RBP9.31□□□□□ -0.92
NCKIPSD-202ENST00000413374 ACKR4Q9NPB9 350 aa9.31□□□□□ -0.92
NCKIPSD-202ENST00000413374 CHST11Q9NPF2 352 aa9.31□□□□□ -0.92
NCKIPSD-202ENST00000413374 KLRF1Q9NZS2 232 aa9.31□□□□□ -0.92
NCKIPSD-202ENST00000413374 SH3BP4Q9P0V3 963 aa9.31□□□□□ -0.92
NCKIPSD-202ENST00000413374 ZDHHC2Q9UIJ5 367 aa9.31□□□□□ -0.92
NCKIPSD-202ENST00000413374 OR10H1Q9Y4A9 318 aa9.31□□□□□ -0.92
NCKIPSD-202ENST00000413374 OR14I1A6ND48 311 aa9.3□□□□□ -0.92
NCKIPSD-202ENST00000413374 PRAMEF25A6NGN4 478 aa9.3□□□□□ -0.92
NCKIPSD-202ENST00000413374 C17orf51A8MQB3 221 aa9.3□□□□□ -0.92
NCKIPSD-202ENST00000413374 KDM4EB2RXH2 506 aaPredicted RBP9.3□□□□□ -0.92
NCKIPSD-202ENST00000413374 UPK1AO00322 258 aa9.3□□□□□ -0.92
NCKIPSD-202ENST00000413374 LSM1O15116 133 aaKnown RBP9.3□□□□□ -0.92
NCKIPSD-202ENST00000413374 TO15178 435 aa9.3□□□□□ -0.92
NCKIPSD-202ENST00000413374 ACOX3O15254 700 aa9.3□□□□□ -0.92
NCKIPSD-202ENST00000413374 ITM2AO43736 263 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms