RNA–Protein interactions for RNA: ENST00000393164.6

ATP2B1-203, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2B1, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-203ENST00000393164 SLC13A4Q9UKG4 626 aa3.29□□□□□ -1.88
ATP2B1-203ENST00000393164 SSUH2Q9Y2M2 353 aa3.29□□□□□ -1.88
ATP2B1-203ENST00000393164 CLDN16Q9Y5I7 305 aa3.29□□□□□ -1.88
ATP2B1-203ENST00000393164 ZNF292O60281 2723 aa3.29□□□□□ -1.88
ATP2B1-203ENST00000393164 VPS13AQ96RL7 3174 aa3.29□□□□□ -1.88
ATP2B1-203ENST00000393164 TRBV5-3A0A0A0MS03 114 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 MYOCOSA0A1B0GUC4 107 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 ELOVL7A1L3X0 281 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 ASPDHA6ND91 283 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 PRORSD1PA6NEY8 169 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 OR2W5A6NFC9 320 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 FAM220BPB1ANY3 271 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 H3BNH8 94 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 SOCS6O14544 535 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 TP53I11O14683 189 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 TERTO14746 1132 aaKnown RBP3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 SLC28A2O43868 658 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 CNOT3O75175 753 aaKnown RBP3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 STX11O75558 287 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 DDAH2O95865 285 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 CBX7O95931 251 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 T-ENOLP0DO92 83 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 HSD17B1P14061 328 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 NAGAP17050 411 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 SPINK2P20155 84 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 ITGA3P26006 1051 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 SSTR4P31391 388 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 GABRA3P34903 492 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 TRHRP34981 398 aaPredicted RBP3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 CDKN2CP42773 168 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 TMPRSS3P57727 454 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 MTPNP58546 118 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 RPS18P62269 152 aaKnown RBP3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 RNF4P78317 190 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 LIPEQ05469 1076 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 PLCXD2Q0VAA5 305 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 CDC20Q12834 499 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 GAB1Q13480 694 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 ATP1A4Q13733 1029 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 COL9A2Q14055 689 aaPredicted RBP3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 VEZF1Q14119 521 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 EXOSC7Q15024 291 aaKnown RBP3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 TGIF1Q15583 401 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 GPAT3Q53EU6 434 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 MTX3Q5HYI7 312 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 DCAF10Q5QP82 559 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 ABHD17BQ5VST6 288 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 TNFAIP8L2Q6P589 184 aaPredicted RBP3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 OPN5Q6U736 354 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 PATL1Q86TB9 770 aaKnown RBP3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 VASH2Q86V25 355 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 IFNEQ86WN2 208 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 PROSER1Q86XN7 944 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 SLC44A2Q8IWA5 706 aaPredicted RBP3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 GPALPP1Q8IXQ4 340 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 SLC15A3Q8IY34 581 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 TMEM156Q8N614 296 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 HIPK4Q8NE63 616 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 OR10A6Q8NH74 314 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 BBS10Q8TAM1 723 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 PNPT1Q8TCS8 783 aaKnown RBP3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 ZNF721Q8TF20 911 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 C8orf44Q96CB5 159 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 TMCO6Q96DC7 493 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 NAF1Q96HR8 494 aaKnown RBP3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 BTBD9Q96Q07 612 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 TRNT1Q96Q11 434 aaKnown RBP3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 GPATCH1Q9BRR8 931 aaKnown RBP3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 LHPPQ9H008 270 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 OR51I1Q9H343 314 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 KAT8Q9H7Z6 458 aaKnown RBP3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 ABCD2Q9UBJ2 740 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 IL17BQ9UHF5 180 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 ZNF232Q9UNY5 417 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 WASF3Q9UPY6 502 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 YARS2Q9Y2Z4 477 aaKnown RBP3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 COL27A1Q8IZC6 1860 aaPredicted RBP3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 IGHV3-20A0A0C4DH32 117 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 A0A0G2JPF8 293 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 HNRNPCL2B2RXH8 293 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 HNRNPCL3B7ZW38 293 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 H0YHG0 523 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 TGFBR3LH3BV60 316 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 FXYD1O00168 92 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 GSC2O15499 205 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 NKX2-2O95096 273 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 PSMG1O95456 288 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 GUSBP08236 651 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 CT62P0C5K7 136 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 HNRNPCL4P0DMR1 293 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 BMP2P12643 396 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 HTR1EP28566 365 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 PTPN6P29350 595 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 IFNA8P32881 189 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 EMDP50402 254 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 GPR143P51810 404 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 CDK6Q00534 326 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 DUSP2Q05923 314 aa3.28□□□□□ -1.88
ATP2B1-203ENST00000393164 MGAT2Q10469 447 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms