RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 TMEM198Q66K66 360 aa11.64□□□□□ -0.55
GGPS1-203ENST00000391855 TRIM42Q8IWZ5 723 aa11.64□□□□□ -0.55
GGPS1-203ENST00000391855 LRRC34Q8IZ02 419 aa11.64□□□□□ -0.55
GGPS1-203ENST00000391855 FNDC5Q8NAU1 212 aa11.64□□□□□ -0.55
GGPS1-203ENST00000391855 RAB3IL1Q8TBN0 382 aa11.64□□□□□ -0.55
GGPS1-203ENST00000391855 PHF10Q8WUB8 498 aaKnown RBP11.64□□□□□ -0.55
GGPS1-203ENST00000391855 TUBGCP3Q96CW5 907 aa11.64□□□□□ -0.55
GGPS1-203ENST00000391855 DTNBP1Q96EV8 351 aa11.64□□□□□ -0.55
GGPS1-203ENST00000391855 SLC35A4Q96G79 324 aa11.64□□□□□ -0.55
GGPS1-203ENST00000391855 TMEM41AQ96HV5 264 aa11.64□□□□□ -0.55
GGPS1-203ENST00000391855 EGLN2Q96KS0 407 aa11.64□□□□□ -0.55
GGPS1-203ENST00000391855 ANGPTL4Q9BY76 406 aa11.64□□□□□ -0.55
GGPS1-203ENST00000391855 ZNF703Q9H7S9 590 aaPredicted RBP11.64□□□□□ -0.55
GGPS1-203ENST00000391855 FOLH1BQ9HBA9 442 aa11.64□□□□□ -0.55
GGPS1-203ENST00000391855 TMBIM4Q9HC24 238 aa11.64□□□□□ -0.55
GGPS1-203ENST00000391855 ACSS1Q9NUB1 689 aaPredicted RBP11.64□□□□□ -0.55
GGPS1-203ENST00000391855 ATAD3AQ9NVI7 634 aa11.64□□□□□ -0.55
GGPS1-203ENST00000391855 ARGLU1Q9NWB6 273 aaPredicted RBP11.64□□□□□ -0.55
GGPS1-203ENST00000391855 NKIRAS1Q9NYS0 192 aa11.64□□□□□ -0.55
GGPS1-203ENST00000391855 EIF3LQ9Y262 564 aaKnown RBP11.64□□□□□ -0.55
GGPS1-203ENST00000391855 CROCCQ5TZA2 2017 aa11.63□□□□□ -0.55
GGPS1-203ENST00000391855 A0A1B0GTH9 108 aa11.63□□□□□ -0.55
GGPS1-203ENST00000391855 OR6C70A6NIJ9 312 aa11.63□□□□□ -0.55
GGPS1-203ENST00000391855 BCKDKO14874 412 aa11.63□□□□□ -0.55
GGPS1-203ENST00000391855 HCN1O60741 890 aa11.63□□□□□ -0.55
GGPS1-203ENST00000391855 PEX11AO75192 247 aa11.63□□□□□ -0.55
GGPS1-203ENST00000391855 ABCB1P08183 1280 aaPredicted RBP11.63□□□□□ -0.55
GGPS1-203ENST00000391855 RNF224P0DH78 156 aa11.63□□□□□ -0.55
GGPS1-203ENST00000391855 BGNP21810 368 aa11.63□□□□□ -0.55
GGPS1-203ENST00000391855 ELAVL4P26378 380 aaKnown RBP11.63□□□□□ -0.55
GGPS1-203ENST00000391855 GPC1P35052 558 aa11.63□□□□□ -0.55
GGPS1-203ENST00000391855 FRKP42685 505 aaPredicted RBP11.63□□□□□ -0.55
GGPS1-203ENST00000391855 MAGEA5P43359 124 aa11.63□□□□□ -0.55
GGPS1-203ENST00000391855 MASP1P48740 699 aa11.63□□□□□ -0.55
GGPS1-203ENST00000391855 RPL14P50914 215 aaKnown RBP11.63□□□□□ -0.55
GGPS1-203ENST00000391855 SMSP52788 366 aa11.63□□□□□ -0.55
GGPS1-203ENST00000391855 HSF1Q00613 529 aa11.63□□□□□ -0.55
GGPS1-203ENST00000391855 SNTA1Q13424 505 aa11.63□□□□□ -0.55
GGPS1-203ENST00000391855 EFR3AQ14156 821 aa11.63□□□□□ -0.55
GGPS1-203ENST00000391855 MPP2Q14168 576 aa11.63□□□□□ -0.55
GGPS1-203ENST00000391855 CASP8Q14790 479 aa11.63□□□□□ -0.55
GGPS1-203ENST00000391855 SLC10A1Q14973 349 aa11.63□□□□□ -0.55
GGPS1-203ENST00000391855 ZNHIT3Q15649 155 aaPredicted RBP11.63□□□□□ -0.55
GGPS1-203ENST00000391855 AGBL2Q5U5Z8 902 aa11.63□□□□□ -0.55
GGPS1-203ENST00000391855 SLC30A6Q6NXT4 461 aa11.63□□□□□ -0.55
GGPS1-203ENST00000391855 TMEM107Q6UX40 140 aa11.63□□□□□ -0.55
GGPS1-203ENST00000391855 TMEM64Q6YI46 380 aa11.63□□□□□ -0.55
GGPS1-203ENST00000391855 MAMDC2Q7Z304 686 aaPredicted RBP11.63□□□□□ -0.55
GGPS1-203ENST00000391855 PACS2Q86VP3 889 aa11.63□□□□□ -0.55
GGPS1-203ENST00000391855 CHERPQ8IWX8 916 aaKnown RBP11.63□□□□□ -0.55
GGPS1-203ENST00000391855 OR2L13Q8N349 312 aa11.63□□□□□ -0.55
GGPS1-203ENST00000391855 ZNF781Q8N8C0 355 aa11.63□□□□□ -0.55
GGPS1-203ENST00000391855 ANKRD42Q8N9B4 389 aa11.63□□□□□ -0.55
GGPS1-203ENST00000391855 OR52N2Q8NGI0 321 aa11.63□□□□□ -0.55
GGPS1-203ENST00000391855 OR5M3Q8NGP4 307 aa11.63□□□□□ -0.55
GGPS1-203ENST00000391855 TLCD1Q96CP7 247 aa11.63□□□□□ -0.55
GGPS1-203ENST00000391855 TMCO6Q96DC7 493 aa11.63□□□□□ -0.55
GGPS1-203ENST00000391855 ELP4Q96EB1 424 aa11.63□□□□□ -0.55
GGPS1-203ENST00000391855 ASIC5Q9NY37 505 aa11.63□□□□□ -0.55
GGPS1-203ENST00000391855 SH3BP4Q9P0V3 963 aa11.63□□□□□ -0.55
GGPS1-203ENST00000391855 PLEKHB1Q9UF11 243 aaPredicted RBP11.63□□□□□ -0.55
GGPS1-203ENST00000391855 ATP6V1HQ9UI12 483 aa11.63□□□□□ -0.55
GGPS1-203ENST00000391855 LRRK2Q5S007 2527 aa11.63□□□□□ -0.55
GGPS1-203ENST00000391855 A0A1B0GVC2 190 aa11.62□□□□□ -0.55
GGPS1-203ENST00000391855 ATP6AP2A0A1C7CYW4 349 aa11.62□□□□□ -0.55
GGPS1-203ENST00000391855 LRRC3CA6NJW4 275 aa11.62□□□□□ -0.55
GGPS1-203ENST00000391855 E9PLN8 166 aa11.62□□□□□ -0.55
GGPS1-203ENST00000391855 AQP7O14520 342 aa11.62□□□□□ -0.55
GGPS1-203ENST00000391855 SCAMP2O15127 329 aaKnown RBP11.62□□□□□ -0.55
GGPS1-203ENST00000391855 AKAP10O43572 662 aa11.62□□□□□ -0.55
GGPS1-203ENST00000391855 ITM2AO43736 263 aa11.62□□□□□ -0.55
GGPS1-203ENST00000391855 SUSD5O60279 629 aa11.62□□□□□ -0.55
GGPS1-203ENST00000391855 ZG16O60844 167 aa11.62□□□□□ -0.55
GGPS1-203ENST00000391855 TRIM3O75382 744 aaPredicted RBP11.62□□□□□ -0.55
GGPS1-203ENST00000391855 ATP6AP2O75787 350 aa11.62□□□□□ -0.55
GGPS1-203ENST00000391855 WISP2O76076 250 aa11.62□□□□□ -0.55
GGPS1-203ENST00000391855 PSMG1O95456 288 aa11.62□□□□□ -0.55
GGPS1-203ENST00000391855 TPOP07202 933 aa11.62□□□□□ -0.55
GGPS1-203ENST00000391855 CT45A8P0DMV1 189 aa11.62□□□□□ -0.55
GGPS1-203ENST00000391855 CT45A9P0DMV2 189 aa11.62□□□□□ -0.55
GGPS1-203ENST00000391855 AGAP20933 346 aa11.62□□□□□ -0.55
GGPS1-203ENST00000391855 PRPS1L1P21108 318 aa11.62□□□□□ -0.55
GGPS1-203ENST00000391855 IL12BP29460 328 aa11.62□□□□□ -0.55
GGPS1-203ENST00000391855 CASP3P42574 277 aa11.62□□□□□ -0.55
GGPS1-203ENST00000391855 MAN2A2P49641 1150 aa11.62□□□□□ -0.55
GGPS1-203ENST00000391855 PNLIPRP2P54317 469 aa11.62□□□□□ -0.55
GGPS1-203ENST00000391855 MAGOHP61326 146 aaKnown RBP11.62□□□□□ -0.55
GGPS1-203ENST00000391855 EMX2Q04743 252 aa11.62□□□□□ -0.55
GGPS1-203ENST00000391855 MLC1Q15049 377 aa11.62□□□□□ -0.55
GGPS1-203ENST00000391855 PRSS53Q2L4Q9 553 aa11.62□□□□□ -0.55
GGPS1-203ENST00000391855 CT45A2Q5DJT8 189 aa11.62□□□□□ -0.55
GGPS1-203ENST00000391855 ATG16L1Q676U5 607 aa11.62□□□□□ -0.55
GGPS1-203ENST00000391855 TRILQ7L0X0 811 aa11.62□□□□□ -0.55
GGPS1-203ENST00000391855 FGD2Q7Z6J4 655 aa11.62□□□□□ -0.55
GGPS1-203ENST00000391855 PRR22Q8IZ63 422 aa11.62□□□□□ -0.55
GGPS1-203ENST00000391855 LIX1Q8N485 282 aa11.62□□□□□ -0.55
GGPS1-203ENST00000391855 ZNF808Q8N4W9 903 aaPredicted RBP11.62□□□□□ -0.55
GGPS1-203ENST00000391855 SIMC1Q8NDZ2 872 aa11.62□□□□□ -0.55
GGPS1-203ENST00000391855 CEP70Q8NHQ1 597 aa11.62□□□□□ -0.55
GGPS1-203ENST00000391855 CLHC1Q8NHS4 586 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms